FC922177

Overview
NameFC922177
Unique NameFC922177
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length587
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC922177 vs. ExPASy Swiss-Prot
Match: FABH_XANCP (3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Xanthomonas campestris pv. campestris GN=fabH PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 3.154e-20
Identity = 46/77 (59.74%), Postives = 60/77 (77.92%), Query Frame = 2
Query:    2 LLLHQANQRIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEAVRSGKVKPGHTIAAAGFGAGLTWGSAILRW 232
            L+ HQAN RII+A A RLD+PME+V+  +  +GNTS+AS+PLALDEAVRSG+V+ G  +    FG G TWGSA+LR+
Sbjct:  249 LIPHQANLRIIEATAKRLDLPMEQVVVTVDRHGNTSSASVPLALDEAVRSGRVQRGQLLLLEAFGGGFTWGSALLRY 325          
BLAST of FC922177 vs. ExPASy Swiss-Prot
Match: FABH_SODGM (3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Sodalis glossinidius (strain morsitans) GN=fabH PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 4.119e-20
Identity = 46/77 (59.74%), Postives = 58/77 (75.32%), Query Frame = 2
Query:    2 LLLHQANQRIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEAVRSGKVKPGHTIAAAGFGAGLTWGSAILRW 232
            L+ HQAN RII A A RL + ME+V+  L  +GNTSAAS+PLALDEAVR G+++PGH +    FG G TWGSA+LR+
Sbjct:  241 LVPHQANLRIITATAKRLGMGMEKVVVTLDRHGNTSAASVPLALDEAVRDGRIQPGHLVLLEAFGGGFTWGSALLRF 317          
BLAST of FC922177 vs. ExPASy Swiss-Prot
Match: FABH_PSYIN (3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Psychromonas ingrahamii (strain 37) GN=fabH PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 7.026e-20
Identity = 47/76 (61.84%), Postives = 57/76 (75.00%), Query Frame = 2
Query:    2 LLLHQANQRIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEAVRSGKVKPGHTIAAAGFGAGLTWGSAILR 229
            L+ HQAN+RII A A +L + M++VI  L N GNTSAAS+PLALDE VRSGK+KPG  I    FG G TWGSA++R
Sbjct:  243 LVPHQANKRIITATAKKLGMSMDQVILTLENQGNTSAASVPLALDEGVRSGKIKPGQLILLEAFGGGFTWGSALVR 318          
BLAST of FC922177 vs. ExPASy Swiss-Prot
Match: FABH_XANC5 (3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=fabH PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 9.177e-20
Identity = 45/77 (58.44%), Postives = 60/77 (77.92%), Query Frame = 2
Query:    2 LLLHQANQRIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEAVRSGKVKPGHTIAAAGFGAGLTWGSAILRW 232
            L+ HQAN RII+A A RL++PME+V+  +  +GNTS+AS+PLALDEAVRSG+V+ G  +    FG G TWGSA+LR+
Sbjct:  249 LIPHQANLRIIEATAKRLELPMEQVVVTVDRHGNTSSASVPLALDEAVRSGRVQRGQLLLLEAFGGGFTWGSALLRY 325          
BLAST of FC922177 vs. ExPASy Swiss-Prot
Match: FABH_XANOM (3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=fabH PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.199e-19
Identity = 45/77 (58.44%), Postives = 59/77 (76.62%), Query Frame = 2
Query:    2 LLLHQANQRIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEAVRSGKVKPGHTIAAAGFGAGLTWGSAILRW 232
            L+ HQAN RII+A A RLD+PME+V+  +  +GNTS+AS+PLALDEAVRSG+V+ G  +    FG G  WGSA+LR+
Sbjct:  249 LIPHQANLRIIEATAKRLDLPMEQVVVTVDRHGNTSSASVPLALDEAVRSGRVQRGQLLLLEAFGGGFAWGSALLRY 325          
BLAST of FC922177 vs. ExPASy Swiss-Prot
Match: FABH_PSEAE (3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Pseudomonas aeruginosa GN=fabH PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.199e-19
Identity = 46/77 (59.74%), Postives = 58/77 (75.32%), Query Frame = 2
Query:    2 LLLHQANQRIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEAVRSGKVKPGHTIAAAGFGAGLTWGSAILRW 232
            L+ HQAN RI+ AVA++LD+P+ERV+SN+A  GNT AASIPLAL   +R G ++ G  +   GFGAGLTWGS  LRW
Sbjct:  246 LVPHQANTRILAAVADQLDLPVERVVSNIAEVGNTVAASIPLALAHGLRQGILRDGGNMVLTGFGAGLTWGSVALRW 322          
BLAST of FC922177 vs. ExPASy Swiss-Prot
Match: FABH_PSEAB (3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=fabH PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.199e-19
Identity = 46/77 (59.74%), Postives = 58/77 (75.32%), Query Frame = 2
Query:    2 LLLHQANQRIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEAVRSGKVKPGHTIAAAGFGAGLTWGSAILRW 232
            L+ HQAN RI+ AVA++LD+P+ERV+SN+A  GNT AASIPLAL   +R G ++ G  +   GFGAGLTWGS  LRW
Sbjct:  246 LVPHQANTRILAAVADQLDLPVERVVSNIAEVGNTVAASIPLALAHGLRQGILRDGGNMVLTGFGAGLTWGSVALRW 322          
BLAST of FC922177 vs. ExPASy Swiss-Prot
Match: FABH_PSEA8 (3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Pseudomonas aeruginosa (strain LESB58) GN=fabH PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.199e-19
Identity = 46/77 (59.74%), Postives = 58/77 (75.32%), Query Frame = 2
Query:    2 LLLHQANQRIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEAVRSGKVKPGHTIAAAGFGAGLTWGSAILRW 232
            L+ HQAN RI+ AVA++LD+P+ERV+SN+A  GNT AASIPLAL   +R G ++ G  +   GFGAGLTWGS  LRW
Sbjct:  246 LVPHQANTRILAAVADQLDLPVERVVSNIAEVGNTVAASIPLALAHGLRQGILRDGGNMVLTGFGAGLTWGSVALRW 322          
BLAST of FC922177 vs. ExPASy Swiss-Prot
Match: FABH_COXBU (3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Coxiella burnetii GN=fabH PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.199e-19
Identity = 47/76 (61.84%), Postives = 58/76 (76.32%), Query Frame = 2
Query:    2 LLLHQANQRIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEAVRSGKVKPGHTIAAAGFGAGLTWGSAILR 229
            L+ HQAN RII+A A RL +P ERVI  +  +GNTSAASIPLALD AVR+GK+K G T+    FGAGL WG+A+L+
Sbjct:  243 LIPHQANLRIIEATAKRLGLPRERVILTIEQHGNTSAASIPLALDAAVRAGKIKRGDTLLLEAFGAGLAWGAALLK 318          
BLAST of FC922177 vs. ExPASy Swiss-Prot
Match: FABH_COXBR (3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Coxiella burnetii (strain RSA 331 / Henzerling II) GN=fabH PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.199e-19
Identity = 47/76 (61.84%), Postives = 58/76 (76.32%), Query Frame = 2
Query:    2 LLLHQANQRIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEAVRSGKVKPGHTIAAAGFGAGLTWGSAILR 229
            L+ HQAN RII+A A RL +P ERVI  +  +GNTSAASIPLALD AVR+GK+K G T+    FGAGL WG+A+L+
Sbjct:  243 LIPHQANLRIIEATAKRLGLPRERVILTIEQHGNTSAASIPLALDAAVRAGKIKRGDTLLLEAFGAGLAWGAALLK 318          
The following BLAST results are available for this feature:
BLAST of FC922177 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 390
Match NameE-valueIdentityDescription
FABH_XANCP3.154e-2059.743-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Xan... [more]
FABH_SODGM4.119e-2059.743-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Sod... [more]
FABH_PSYIN7.026e-2061.843-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Psy... [more]
FABH_XANC59.177e-2058.443-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Xan... [more]
FABH_XANOM1.199e-1958.443-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Xan... [more]
FABH_PSEAE1.199e-1959.743-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Pse... [more]
FABH_PSEAB1.199e-1959.743-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Pse... [more]
FABH_PSEA81.199e-1959.743-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Pse... [more]
FABH_COXBU1.199e-1961.843-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Cox... [more]
FABH_COXBR1.199e-1961.843-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Cox... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM1DH05RM1 SLH Citrus sinensis cDNA clone KN0AAM1DH05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC922177 ID=FC922177; Name=FC922177; organism=Citrus sinensis; type=EST; length=587bp
GTTACTTCTTCATCAGGCAAACCAGAGGATCATAGATGCAGTTGCAAACC
GTTTAGATGTCCCAATGGAACGTGTTATATCAAACTTGGCAAATTATGGT
AACACAAGTGCTGCATCCATTCCGCTAGCATTAGATGAAGCAGTTCGAAG
TGGGAAGGTCAAGCCAGGTCATACTATTGCTGCTGCGGGTTTTGGTGCTG
GTCTAACTTGGGGTTCTGCTATTCTTAGATGGGGATGAGAATTTACTATC
AATGACCAGTACCGAAGAGAAAGGAAAATATGTTACAGTGAGATGTGCTT
GAATCCATGCTCCCCGATACATATGTATTGTGGTTAATTGGGGAGGTTGC
AGTCTCATAATCTCCATCAGCTCCATCCTGTTCGTTTGAAGCATCAGCTC
CATCCTGTTTGTTTGAAGTTTGTTACTTCGCAAATGGCGCTCCTAATAAC
TTATTAATTTTTTTTTTCCCAGTCAGTCTTGAGCTTCCCTAATTTCCATT
TTTCAGCGGGTTATGAATAATTGCAGTGTGAACAGCGTCCACAAAATGTG
GTAAAAACTTAAAATATTTACAAGAAAAAAAAAAAAA
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