DY304864
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY304864 vs. ExPASy Swiss-Prot
Match: MNME_SYNP6 (tRNA modification GTPase mnmE OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=mnmE PE=3 SV=2) HSP 1 Score: 138.272 bits (347), Expect = 5.803e-32 Identity = 82/174 (47.13%), Postives = 102/174 (58.62%), Query Frame = 2 Query: 275 TIAAIVTSIGGPPGAVGIVRLSGPMAVDIXXXXXXXXXXXXXXXXXXXXWRPTSHVVEYGVVLD-RHGIVVDEVLAVPMLAPRSYTREDVVELQCHGSEVCLRRVLRACLEAGATLAQPGEFTLRAFLNGRLDLSQAENVEKLISXXXXXXXXXXXXGIQGGFSSLVPSVRAKC 793 TIAAI T+I G+VGIVRLSG A +I W SH + YG + D G +VDE L +PMLAPRSYTREDVVEL CHG + +++ L+ C+ AGA LA+PGEFTLRAFLNGRLDLSQAE++ LIS +QG + +R +C Sbjct: 8 TIAAIATAIVPQQGSVGIVRLSGAAATEIARQIFQIAGQQP--------WE--SHRILYGYIRDPESGRLVDEALLLPMLAPRSYTREDVVELHCHGGLMPVQQTLQLCIRAGARLAEPGEFTLRAFLNGRLDLSQAESIADLISAQSPQAAQAALGSLQGKLGHPIRQLRDRC 171
BLAST of DY304864 vs. ExPASy Swiss-Prot
Match: MNME_SYNE7 (tRNA modification GTPase mnmE OS=Synechococcus elongatus (strain PCC 7942) GN=mnmE PE=3 SV=3) HSP 1 Score: 138.272 bits (347), Expect = 5.803e-32 Identity = 82/174 (47.13%), Postives = 102/174 (58.62%), Query Frame = 2 Query: 275 TIAAIVTSIGGPPGAVGIVRLSGPMAVDIXXXXXXXXXXXXXXXXXXXXWRPTSHVVEYGVVLD-RHGIVVDEVLAVPMLAPRSYTREDVVELQCHGSEVCLRRVLRACLEAGATLAQPGEFTLRAFLNGRLDLSQAENVEKLISXXXXXXXXXXXXGIQGGFSSLVPSVRAKC 793 TIAAI T+I G+VGIVRLSG A +I W SH + YG + D G +VDE L +PMLAPRSYTREDVVEL CHG + +++ L+ C+ AGA LA+PGEFTLRAFLNGRLDLSQAE++ LIS +QG + +R +C Sbjct: 8 TIAAIATAIVPQQGSVGIVRLSGAAATEIARQIFQIAGQQP--------WE--SHRILYGYIRDPESGRLVDEALLLPMLAPRSYTREDVVELHCHGGLMPVQQTLQLCIRAGARLAEPGEFTLRAFLNGRLDLSQAESIADLISAQSPQAAQAALGSLQGKLGHPIRQLRDRC 171
BLAST of DY304864 vs. ExPASy Swiss-Prot
Match: MNME_TRIEI (tRNA modification GTPase mnmE OS=Trichodesmium erythraeum (strain IMS101) GN=mnmE PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.688e-31 Identity = 80/174 (45.98%), Postives = 104/174 (59.77%), Query Frame = 2 Query: 275 TIAAIVTSIGGPPGAVGIVRLSGPMAVDIXXXXXXXXXXXXXXXXXXXXWRPTSHVVEYGVVLDRH-GIVVDEVLAVPMLAPRSYTREDVVELQCHGSEVCLRRVLRACLEAGATLAQPGEFTLRAFLNGRLDLSQAENVEKLISXXXXXXXXXXXXGIQGGFSSLVPSVRAKC 793 TIAAI T+I G+VGIVR+SG A+ I W +H + YG + H G +VDE L + M APRSYTREDVVE CHG + +++VL+ C+EAGA LAQPGEFTLRAFLNGRLDL+QAE++ +L+ G+QG +S + +RA C Sbjct: 11 TIAAIATAIVPQQGSVGIVRMSGSEAMKIAQTLFHAPGKQV--------WE--THHILYGYIRHPHTGQLVDETLLLIMKAPRSYTREDVVEFHCHGGIIAIQQVLQLCIEAGAELAQPGEFTLRAFLNGRLDLTQAESIAELVGSQSPAAAQVALAGLQGKLASPIRHLRACC 174
BLAST of DY304864 vs. ExPASy Swiss-Prot
Match: MNME_ACAM1 (tRNA modification GTPase mnmE OS=Acaryochloris marina (strain MBIC 11017) GN=mnmE PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 2.880e-31 Identity = 82/174 (47.13%), Postives = 101/174 (58.05%), Query Frame = 2 Query: 275 TIAAIVTSIGGPPGAVGIVRLSGPMAVDIXXXXXXXXXXXXXXXXXXXXWRPTSHVVEYGVVLDR-HGIVVDEVLAVPMLAPRSYTREDVVELQCHGSEVCLRRVLRACLEAGATLAQPGEFTLRAFLNGRLDLSQAENVEKLISXXXXXXXXXXXXGIQGGFSSLVPSVRAKC 793 TIAAI T+I G++GIVRLSG AV I W SH V YG + ++DE L + MLAPRSYTREDVVE CHG + +++VL ACL+AGA LAQPGEFTLRAFLNGRLDL+QAE V L+ G+QG +S + +R +C Sbjct: 5 TIAAIATAIVPQQGSIGIVRLSGVEAVSIAKQLFQTPGKQQ--------WE--SHRVLYGYIQQPLTQQIIDEGLLLLMLAPRSYTREDVVEFHCHGGMIAVQQVLEACLQAGAELAQPGEFTLRAFLNGRLDLTQAEGVADLVGARSPQAAQAALAGVQGKLASPIRELRQRC 168
BLAST of DY304864 vs. ExPASy Swiss-Prot
Match: MNME_ANASP (tRNA modification GTPase mnmE OS=Anabaena sp. (strain PCC 7120) GN=mnmE PE=1 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 3.184e-30 Identity = 80/176 (45.45%), Postives = 102/176 (57.95%), Query Frame = 2 Query: 275 TIAAIVTSIGGPPGAVGIVRLSGPMAVDIXXXXXXXXXXXXXXXXXXXXWRPTSHVVEYGVVLDRHGI---VVDEVLAVPMLAPRSYTREDVVELQCHGSEVCLRRVLRACLEAGATLAQPGEFTLRAFLNGRLDLSQAENVEKLISXXXXXXXXXXXXGIQGGFSSLVPSVRAKC 793 TIAAI T+I G+VGIVR+SG A+ I W SH + YG + RH +VDE L + M APRSYTREDVVE CHG + +++VL+ CLE+GA LAQPGEFTLRAFLNGRLDL+QAE++ L+ G+QG + + +RA C Sbjct: 6 TIAAIATAIVPQQGSVGIVRVSGSQAIAIAQTLFDAPGKQV--------WE--SHRILYGYI--RHPQTRQIVDEALLLLMKAPRSYTREDVVEFHCHGGIIAVQQVLQLCLESGARLAQPGEFTLRAFLNGRLDLTQAESIADLVGARSPQAAQTALAGLQGKLAHPIRQLRANC 169
BLAST of DY304864 vs. ExPASy Swiss-Prot
Match: MNME_CYAP4 (tRNA modification GTPase mnmE OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=mnmE PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 4.159e-30 Identity = 81/175 (46.29%), Postives = 101/175 (57.71%), Query Frame = 2 Query: 272 RTIAAIVTSIGGPPGAVGIVRLSGPMAVDIXXXXXXXXXXXXXXXXXXXXWRPTSHVVEYGVVLD-RHGIVVDEVLAVPMLAPRSYTREDVVELQCHGSEVCLRRVLRACLEAGATLAQPGEFTLRAFLNGRLDLSQAENVEKLISXXXXXXXXXXXXGIQGGFSSLVPSVRAKC 793 +TIAAI T+I G++ IVRLSG AV I W SH + YG V + R G VDE L + MLAPRSYT+EDVVE CHG + +++VL+ CLEAGA LAQPGEFTLRAFL+GRLDL+QAE+V L+ G+QG + +R C Sbjct: 6 QTIAAIATAIVPQQGSIAIVRLSGSEAVAIAQRLFIAPGQQV--------WE--SHRILYGYVCNPRTGQRVDEALLLLMLAPRSYTKEDVVEFHCHGGMIAVQQVLQLCLEAGAVLAQPGEFTLRAFLHGRLDLTQAESVADLVGAKSPQAAQAALAGLQGKLIQPLQQLRRTC 170
BLAST of DY304864 vs. ExPASy Swiss-Prot
Match: MNME_ANAVT (tRNA modification GTPase mnmE OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=mnmE PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 7.094e-30 Identity = 80/176 (45.45%), Postives = 101/176 (57.39%), Query Frame = 2 Query: 275 TIAAIVTSIGGPPGAVGIVRLSGPMAVDIXXXXXXXXXXXXXXXXXXXXWRPTSHVVEYGVVLDRHGI---VVDEVLAVPMLAPRSYTREDVVELQCHGSEVCLRRVLRACLEAGATLAQPGEFTLRAFLNGRLDLSQAENVEKLISXXXXXXXXXXXXGIQGGFSSLVPSVRAKC 793 TIAAI T+I G+VGIVR+SG A+ I W SH + YG + RH +VDE L + M APRSYTREDVVE CHG + +++VL+ CLE GA LAQPGEFTLRAFLNGRLDL+QAE++ L+ G+QG + + +RA C Sbjct: 10 TIAAIATAIVPQQGSVGIVRVSGSQAIAIAQTLFHAPGKQV--------WE--SHRILYGYI--RHPQTRQIVDEALLLLMKAPRSYTREDVVEFHCHGGIMAVQQVLQLCLEGGARLAQPGEFTLRAFLNGRLDLTQAESIADLVGARSPQAAQTALAGLQGKLAHPIRQLRANC 173
BLAST of DY304864 vs. ExPASy Swiss-Prot
Match: MNME_SYNJB (tRNA modification GTPase mnmE OS=Synechococcus sp. GN=mnmE PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.580e-29 Identity = 76/170 (44.71%), Postives = 98/170 (57.65%), Query Frame = 2 Query: 275 TIAAIVTSIGGPPGAVGIVRLSGPMAVDIXXXXXXXXXXXXXXXXXXXXWRPTSHVVEYGVVLDRHGIVVDEVLAVPMLAPRSYTREDVVELQCHGSEVCLRRVLRACLEAGATLAQPGEFTLRAFLNGRLDLSQAENVEKLISXXXXXXXXXXXXGIQGGFSSLVPSVR 784 TIAAI T++ G+VGIVRLSG A+ I W SH + YG + D G ++DE LAV M APRSYTREDV EL CHG + ++ L+ CL GA LAQPGEF+LRAFLNGR+DL+QAE+V L++ G+QG + ++R Sbjct: 10 TIAAIATAVVPEQGSVGIVRLSGSRALPIVQAIFTPARRNAV-------WE--SHRLLYGWIRDEKGQILDEALAVWMQAPRSYTREDVAELHCHGGIMVVQATLQQCLRQGARLAQPGEFSLRAFLNGRIDLTQAESVADLVAARSPQAARMALAGLQGKLGGSIRALR 170
BLAST of DY304864 vs. ExPASy Swiss-Prot
Match: MNME_THEEB (tRNA modification GTPase mnmE OS=Thermosynechococcus elongatus (strain BP-1) GN=mnmE PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 3.521e-29 Identity = 80/174 (45.98%), Postives = 99/174 (56.90%), Query Frame = 2 Query: 275 TIAAIVTSIGGPPGAVGIVRLSGPMAVDIXXXXXXXXXXXXXXXXXXXXWRPTSHVVEYGVVLDRHGIV-VDEVLAVPMLAPRSYTREDVVELQCHGSEVCLRRVLRACLEAGATLAQPGEFTLRAFLNGRLDLSQAENVEKLISXXXXXXXXXXXXGIQGGFSSLVPSVRAKC 793 TIAAI T+I G++GIVRLSG AV I W SH + YG V D VDE L + MLAPRSYTREDVVE CHG + ++RVL+ C+ AGA LA PGEFTLRAFLNGRLDL+QAE+V +L++ G+ G + + +R C Sbjct: 7 TIAAIATAIVPQQGSIGIVRLSGAKAVAIAQSLFEAPGKQP--------WE--SHRILYGYVRDPQTKERVDEALLLLMLAPRSYTREDVVEFHCHGGLIPVQRVLQLCVAAGARLADPGEFTLRAFLNGRLDLTQAESVAELVAAQSTTAAQIALAGLTGKLARPLQQIRQTC 170
BLAST of DY304864 vs. ExPASy Swiss-Prot
Match: MNME_SYNEL (tRNA modification GTPase mnmE OS=Synechococcus elongatus GN=mnmE PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 3.521e-29 Identity = 80/174 (45.98%), Postives = 99/174 (56.90%), Query Frame = 2 Query: 275 TIAAIVTSIGGPPGAVGIVRLSGPMAVDIXXXXXXXXXXXXXXXXXXXXWRPTSHVVEYGVVLDRHGIV-VDEVLAVPMLAPRSYTREDVVELQCHGSEVCLRRVLRACLEAGATLAQPGEFTLRAFLNGRLDLSQAENVEKLISXXXXXXXXXXXXGIQGGFSSLVPSVRAKC 793 TIAAI T+I G++GIVRLSG AV I W SH + YG V D VDE L + MLAPRSYTREDVVE CHG + ++RVL+ C+ AGA LA PGEFTLRAFLNGRLDL+QAE+V +L++ G+ G + + +R C Sbjct: 7 TIAAIATAIVPQQGSIGIVRLSGAKAVAIAQSLFEAPGKQP--------WE--SHRILYGYVRDPQTKERVDEALLLLMLAPRSYTREDVVEFHCHGGLIPVQRVLQLCVAAGARLADPGEFTLRAFLNGRLDLTQAESVAELVAAQSTTAAQIALAGLTGKLARPLQQIRQTC 170 The following BLAST results are available for this feature:
BLAST of DY304864 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY304864 ID=DY304864; Name=DY304864; organism=Citrus clementina; type=EST; length=894bpback to top |