CF838856
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF838856 vs. ExPASy Swiss-Prot
Match: YFJP_BACSU (Putative DNA-3-methyladenine glycosylase yfjP OS=Bacillus subtilis GN=yfjP PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 4.658e-20 Identity = 47/128 (36.72%), Postives = 73/128 (57.03%), Query Frame = 3 Query: 24 PETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVE 407 PET+ L Q LR + S RKA Y D +R G LS S + +M D+ + L + GIG W+V ++F L RP++ P+ D+G++ ++ + L++ P M + ++W PY S AS YLWR +E Sbjct: 160 PETIAELDYQDLRDLQFSMRKAEYTIDTSRMIAEGTLSLSELPHMADEDIMKKLIKIRGIGPWTVQNVLMFGLGRPNLFPLADIGLQNAIKRHFQLDDKPAKDVMLAMSKEWEPYLSYASLYLWRSIE 287
BLAST of CF838856 vs. ExPASy Swiss-Prot
Match: MAG1_SCHPO (DNA-3-methyladenine glycosylase 1 OS=Schizosaccharomyces pombe GN=mag1 PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.832e-16 Identity = 42/126 (33.33%), Postives = 71/126 (56.35%), Query Frame = 3 Query: 24 PETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGIL-SDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWR 398 PE + + + +R G S RK L +A +G++ + + ++ L LT + GIG W+V M +IFSL+R DV+P +DL +R G + L+ L ++P + + E P+R+ A+WYLW+ Sbjct: 87 PEEIRDMDFEIMRACGFSARKIDSLKSIAEATISGLIPTKEEAERLSNEELIERLTQIKGIGRWTVEMLLIFSLNRDDVMPADDLSIRNGYRYLHRLPKIPTKMYVLKHSEICAPFRTAAAWYLWK 212
BLAST of CF838856 vs. ExPASy Swiss-Prot
Match: MAG2_SCHPO (Probable DNA-3-methyladenine glycosylase 2 OS=Schizosaccharomyces pombe GN=SPBC23G7.11 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 1.714e-14 Identity = 36/126 (28.57%), Postives = 71/126 (56.35%), Query Frame = 3 Query: 24 PETVLALTPQQLRQIGVSGRKASYLHDLARKYQNG-ILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWR 398 P+ ++ + L + G S K+ +H +A N I S S I M ++ L L+ + G+ W++ M+ IF+L R D++P +D ++ + + L P+ ++++L + +PYR++A+WYLW+ Sbjct: 79 PKQIMETDVETLHECGFSKLKSQEIHIVAEAALNKQIPSKSEIEKMSEEELMESLSKIKGVKRWTIEMYSIFTLGRLDIMPADDSTLKNEAKEFFGLSSKPQTEEVEKLTKPCKPYRTIAAWYLWQ 204
BLAST of CF838856 vs. ExPASy Swiss-Prot
Match: 3MGA_BACSU (DNA-3-methyladenine glycosylase OS=Bacillus subtilis GN=alkA PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 4.223e-13 Identity = 35/124 (28.23%), Postives = 68/124 (54.84%), Query Frame = 3 Query: 27 ETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWR 398 E + LTP L I ++ +K+ Y+ +AR +G LS ++ M+ K L + GIG W+ + ++ L P PI+D+G+ +++L ++ P ++ ++ W+ ++S A++YLWR Sbjct: 177 ERIARLTPTDLADIKMTVKKSEYIIGIARLMASGELSREKLMKMNFKDAEKNLIKIRGIGPWTANYVLMRCLRFPTAFPIDDVGLIHSIKILRNMNRKPTKDEILEISVPWKEWQSYATFYLWR 300 The following BLAST results are available for this feature:
BLAST of CF838856 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF838856 ID=CF838856; Name=CF838856; organism=Citrus sinensis; type=EST; length=492bpback to top |