CF838909
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF838909 vs. ExPASy Swiss-Prot
Match: GSH1_TOBAC (Glutamate--cysteine ligase, chloroplastic OS=Nicotiana tabacum GN=GSH1 PE=2 SV=2) HSP 1 Score: 234.572 bits (597), Expect = 4.754e-61 Identity = 125/186 (67.20%), Postives = 138/186 (74.19%), Query Frame = 1 Query: 220 MTLISRASPSCRVLTDVTRCTIRRSGVCGLAKNAEASRMKETCVSFSSSSRYSAKISQVLHLDNAXXXXXXXXXXXVAASPPTEDAVVVTEPLTKEDLVGYLASGCKPKEKWRIGTEHEKFGFEFGTLRPMKYEQIAELLNSIAERFDWEKVMEGDYIIGLKQGKQSISLEPGGQFELSGAPLETL 777 M L+S+A S + ++ +C SG + N E +MK+ C + SSR S+K Q ++LD VAASPPTEDAVV EPLTKEDLV YLASGCK KEKWRIGTEHEKFGFEFGTLRPMKYEQIAELLN IAERFDWEKVMEGD IIGLKQGKQSISLEPGGQFELSGAPLETL Sbjct: 1 MALMSQAGSSHCIYSEKMKCI---SGHSSITSNMEMLKMKDICFG-NISSRNSSKPMQGIYLDRVGVERRRGRLAIVAASPPTEDAVVAAEPLTKEDLVAYLASGCKSKEKWRIGTEHEKFGFEFGTLRPMKYEQIAELLNGIAERFDWEKVMEGDNIIGLKQGKQSISLEPGGQFELSGAPLETL 182
BLAST of CF838909 vs. ExPASy Swiss-Prot
Match: GSH1_SOLLC (Glutamate--cysteine ligase, chloroplastic OS=Solanum lycopersicum GN=GSH1 PE=2 SV=1) HSP 1 Score: 232.261 bits (591), Expect = 2.359e-60 Identity = 122/186 (65.59%), Postives = 138/186 (74.19%), Query Frame = 1 Query: 220 MTLISRASPSCRVLTDVTRCTIRRSGVCGLAKNAEASRMKETCVSFSSSSRYSAKISQVLHLDNAXXXXXXXXXXXVAASPPTEDAVVVTEPLTKEDLVGYLASGCKPKEKWRIGTEHEKFGFEFGTLRPMKYEQIAELLNSIAERFDWEKVMEGDYIIGLKQGKQSISLEPGGQFELSGAPLETL 777 M L+S+A S + ++ RC SG + N + RM+E C SSR +++ Q +L++ VAASPPTEDAVV EPLTKEDLVGYLASGCK KEKWRIGTEHEKFGFEFGTLRPMKY+QIA+LLN IAERFDWEKVMEGD IIGLKQGKQSISLEPGGQFELSGAPLETL Sbjct: 1 MALMSQAGSSHCIYSEKVRCI---SGHRSIINNMDMFRMREICFGVDISSRNASRRVQGNYLNHIGVGSRRGDLTIVAASPPTEDAVVAAEPLTKEDLVGYLASGCKSKEKWRIGTEHEKFGFEFGTLRPMKYDQIADLLNGIAERFDWEKVMEGDKIIGLKQGKQSISLEPGGQFELSGAPLETL 183
BLAST of CF838909 vs. ExPASy Swiss-Prot
Match: GSH1_ARATH (Glutamate--cysteine ligase, chloroplastic OS=Arabidopsis thaliana GN=GSH1 PE=1 SV=2) HSP 1 Score: 208.379 bits (529), Expect = 3.648e-53 Identity = 117/187 (62.57%), Postives = 136/187 (72.73%), Query Frame = 1 Query: 220 MTLISRASPSCRVL-TDVTRCTIRRSGVCGLAKNAEASRMKETCVSFSSSSRYSAKISQVLHLDNAXXXXXXXXXXXVAASPPTEDAVVVTEPLTKEDLVGYLASGCKPKEKWRIGTEHEKFGFEFGTLRPMKYEQIAELLNSIAERFDWEKVMEGDYIIGLKQGKQSISLEPGGQFELSGAPLETL 777 M L+S+A S V+ + V ++ V G +N + RMKE +F SS YS +S L ++ VAASPPTE+AVV TEPLT+EDL+ YLASGCK K+K+RIGTEHEKFGFE TLRPMKY+QIAELLN IAERF+WEKVMEGD IIGLKQGKQSISLEPGGQFELSGAPLETL Sbjct: 1 MALLSQAGGSYTVVPSGVCSKAGTKAVVSGGVRNLDVLRMKE---AFGSS--YSRSLSTKSMLLHSVKRSKRGHQLIVAASPPTEEAVVATEPLTREDLIAYLASGCKTKDKYRIGTEHEKFGFEVNTLRPMKYDQIAELLNGIAERFEWEKVMEGDKIIGLKQGKQSISLEPGGQFELSGAPLETL 182
BLAST of CF838909 vs. ExPASy Swiss-Prot
Match: GSH1_BRAJU (Glutamate--cysteine ligase, chloroplastic OS=Brassica juncea GN=GSH1 PE=1 SV=1) HSP 1 Score: 207.223 bits (526), Expect = 8.127e-53 Identity = 110/163 (67.48%), Postives = 120/163 (73.62%), Query Frame = 1 Query: 289 RSGVCGLAKNAEASRMKETCVSFSSSSRYSAKISQVLHLDNAXXXXXXXXXXXVAASPPTEDAVVVTEPLTKEDLVGYLASGCKPKEKWRIGTEHEKFGFEFGTLRPMKYEQIAELLNSIAERFDWEKVMEGDYIIGLKQGKQSISLEPGGQFELSGAPLETL 777 R+G ++ RMKET VS S+ L + VAASPPTE+AVV TEPLT+EDL+ YLASGCK KEKWRIGTEHEKFGFE TLRPMKY+QIAELLNSIAERF+WEKVMEGD IIGLKQGKQSISLEPGGQFELSGAPLETL Sbjct: 21 RTGTKTVSGCVNVLRMKETYVS---------SYSRTLSTKSMLKRSKRGHQLIVAASPPTEEAVVATEPLTREDLIAYLASGCKSKEKWRIGTEHEKFGFEVNTLRPMKYDQIAELLNSIAERFEWEKVMEGDKIIGLKQGKQSISLEPGGQFELSGAPLETL 174
BLAST of CF838909 vs. ExPASy Swiss-Prot
Match: GSH1_MEDTR (Glutamate--cysteine ligase, chloroplastic OS=Medicago truncatula GN=GSH1 PE=2 SV=1) HSP 1 Score: 205.682 bits (522), Expect = 2.365e-52 Identity = 106/150 (70.67%), Postives = 120/150 (80.00%), Query Frame = 1 Query: 334 MKETCVS--FSSSSRYSAKISQVLHLDNAXXXXXXXXXXXVAASPPTEDAVVVTEPLTKEDLVGYLASGCKPKEKWRIGTEHEKFGFEFGTLRPMKYEQIAELLNSIAERFDWEKVMEGDYIIGLKQGKQSISLEPGGQFELSGAPLETL 777 +++T +S FS SS+ S ++L + VAASPPTEDAVV TEPLTK+DL+ YLASGCK K+KWRIGTEHEKFGFE G+LRPMKYEQI+ELLN IAERFDW+KVMEGD IIGLKQGKQSISLEPGGQFELSGAPLETL Sbjct: 26 IRKTSISNTFSFSSKNSLSFKRILTSGGSRRFI-------VAASPPTEDAVVATEPLTKQDLIDYLASGCKTKDKWRIGTEHEKFGFELGSLRPMKYEQISELLNGIAERFDWDKVMEGDNIIGLKQGKQSISLEPGGQFELSGAPLETL 168
BLAST of CF838909 vs. ExPASy Swiss-Prot
Match: GSH1A_ORYSJ (Glutamate--cysteine ligase A, chloroplastic OS=Oryza sativa subsp. japonica GN=GSH1-1 PE=2 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 2.991e-47 Identity = 88/110 (80.00%), Postives = 100/110 (90.91%), Query Frame = 1 Query: 448 VAASPPTEDAVVVTEPLTKEDLVGYLASGCKPKEKWRIGTEHEKFGFEFGTLRPMKYEQIAELLNSIAERFDWEKVMEGDYIIGLKQGKQSISLEPGGQFELSGAPLETL 777 VAASPPTE+AV +TEPLTKEDLV YL SGCKPKE WRIGTEHEKFGFE TLRP+KY+QI ++LN +AERFDW+K++E + +IGLKQGKQSISLEPGGQFELSGAPLETL Sbjct: 43 VAASPPTEEAVQMTEPLTKEDLVAYLVSGCKPKENWRIGTEHEKFGFEVDTLRPIKYDQIRDILNGLAERFDWDKIVEENNVIGLKQGKQSISLEPGGQFELSGAPLETL 152
BLAST of CF838909 vs. ExPASy Swiss-Prot
Match: GSH1A_ORYSI (Glutamate--cysteine ligase A, chloroplastic OS=Oryza sativa subsp. indica GN=GSH1-1 PE=2 SV=2) HSP 1 Score: 188.734 bits (478), Expect = 2.991e-47 Identity = 88/110 (80.00%), Postives = 100/110 (90.91%), Query Frame = 1 Query: 448 VAASPPTEDAVVVTEPLTKEDLVGYLASGCKPKEKWRIGTEHEKFGFEFGTLRPMKYEQIAELLNSIAERFDWEKVMEGDYIIGLKQGKQSISLEPGGQFELSGAPLETL 777 VAASPPTE+AV +TEPLTKEDLV YL SGCKPKE WRIGTEHEKFGFE TLRP+KY+QI ++LN +AERFDW+K++E + +IGLKQGKQSISLEPGGQFELSGAPLETL Sbjct: 43 VAASPPTEEAVQMTEPLTKEDLVAYLVSGCKPKENWRIGTEHEKFGFEVDTLRPIKYDQIRDILNGLAERFDWDKIVEENNVIGLKQGKQSISLEPGGQFELSGAPLETL 152
BLAST of CF838909 vs. ExPASy Swiss-Prot
Match: GSH1B_ORYSJ (Glutamate--cysteine ligase B, chloroplastic OS=Oryza sativa subsp. japonica GN=GSH1-2 PE=3 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 6.664e-47 Identity = 87/110 (79.09%), Postives = 100/110 (90.91%), Query Frame = 1 Query: 448 VAASPPTEDAVVVTEPLTKEDLVGYLASGCKPKEKWRIGTEHEKFGFEFGTLRPMKYEQIAELLNSIAERFDWEKVMEGDYIIGLKQGKQSISLEPGGQFELSGAPLETL 777 VAASPPTE+AV +TEPLTKEDL+ YL SGCKPKE WRIGTEHEKFGFE TLRP+KY+QI ++LN +AERFDW+K++E + +IGLKQGKQSISLEPGGQFELSGAPLETL Sbjct: 47 VAASPPTEEAVQMTEPLTKEDLMAYLVSGCKPKENWRIGTEHEKFGFEVDTLRPIKYDQIRDILNGLAERFDWDKIVEENNVIGLKQGKQSISLEPGGQFELSGAPLETL 156
BLAST of CF838909 vs. ExPASy Swiss-Prot
Match: GSH1B_ORYSI (Glutamate--cysteine ligase B, chloroplastic OS=Oryza sativa subsp. indica GN=GSH1-2 PE=3 SV=2) HSP 1 Score: 187.578 bits (475), Expect = 6.664e-47 Identity = 87/110 (79.09%), Postives = 100/110 (90.91%), Query Frame = 1 Query: 448 VAASPPTEDAVVVTEPLTKEDLVGYLASGCKPKEKWRIGTEHEKFGFEFGTLRPMKYEQIAELLNSIAERFDWEKVMEGDYIIGLKQGKQSISLEPGGQFELSGAPLETL 777 VAASPPTE+AV +TEPLTKEDL+ YL SGCKPKE WRIGTEHEKFGFE TLRP+KY+QI ++LN +AERFDW+K++E + +IGLKQGKQSISLEPGGQFELSGAPLETL Sbjct: 47 VAASPPTEEAVQMTEPLTKEDLMAYLVSGCKPKENWRIGTEHEKFGFEVDTLRPIKYDQIRDILNGLAERFDWDKIVEENNVIGLKQGKQSISLEPGGQFELSGAPLETL 156 The following BLAST results are available for this feature:
BLAST of CF838909 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF838909 ID=CF838909; Name=CF838909; organism=Citrus sinensis; type=EST; length=777bpback to top |