EY739244

Overview
NameEY739244
Unique NameEY739244
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length878
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY739244 vs. ExPASy Swiss-Prot
Match: AB13I_ARATH (Protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic OS=Arabidopsis thaliana GN=TGD3 PE=1 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 2.765e-66
Identity = 120/165 (72.73%), Postives = 134/165 (81.21%), Query Frame = 2
Query:  251 QRKVVCACVAPPRDLGTDGFPATKFNDSSKSENVNTLFEP-EDDGDVLIDCRNVYKSFGEKHILRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDKGEVYIRGTKRAGLIXDEEISGLRIGLVFXSAALFDSLTVRENVGFLLYENSNMRDEPIHSL*T 742
            +RKV C C+APP++L  D   ATKF+  +KS          E+D DVLI+CR+VYKSFGEKHIL+GVSFKIRHGEAVG+IGPSGTGKSTILKI+AGLLAPDKGEVYIRG KRAGLI DEEISGLRIGLVF SAALFDSL+VRENVGFLLYE S M +  I  L T
Sbjct:   40 RRKVSCCCIAPPQNLDND---ATKFDSLTKSGGGMCKERGLENDSDVLIECRDVYKSFGEKHILKGVSFKIRHGEAVGVIGPSGTGKSTILKIMAGLLAPDKGEVYIRGKKRAGLISDEEISGLRIGLVFQSAALFDSLSVRENVGFLLYERSKMSENQISELVT 201          

HSP 2 Score: 48.9062 bits (115), Expect = 2.765e-66
Identity = 25/43 (58.14%), Postives = 30/43 (69.77%), Query Frame = 1
Query:  727 SQLVNDNLRAVGSKGVEDRLPPELSGGMKKKFANSNQNFHNTT 855
            S+LV   L AVG KGVE+RLP ELSGGMKK+ A +     +TT
Sbjct:  197 SELVTQTLAAVGLKGVENRLPSELSGGMKKRVALARSLIFDTT 239          
BLAST of EY739244 vs. ExPASy Swiss-Prot
Match: CYSA_BACHD (Sulfate/thiosulfate import ATP-binding protein cysA OS=Bacillus halodurans GN=cysA PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 2.020e-15
Identity = 37/96 (38.54%), Postives = 58/96 (60.42%), Query Frame = 2
Query:  401 RNVYKSFGEKHILRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDKGEVYIRGTKRAGLIXDEEISGLRIGLVFXSAALFDSLTVRENVGF 688
            +NV KSFG    L  ++  I  GE V ++GPSG+GK+++L+IIAGL A D+G++Y    K    +     +  ++G VF   ALF  +TV +N+ +
Sbjct:    6 QNVSKSFGSFQALADINLSIETGELVALLGPSGSGKTSLLRIIAGLEAADQGDIYFHKDK----VTQTHAASRQVGFVFQHYALFPHMTVADNISY 97          

HSP 2 Score: 28.8758 bits (63), Expect = 2.020e-15
Identity = 12/33 (36.36%), Postives = 22/33 (66.67%), Query Frame = 1
Query:  727 SQLVNDNLRAVGSKGVEDRLPPELSGGMKKKFA 825
            ++ V + L  V  +G++DR P +LSGG +++ A
Sbjct:  114 AEKVRELLALVKLEGMDDRYPAQLSGGQRQRIA 146          
BLAST of EY739244 vs. ExPASy Swiss-Prot
Match: MKL_MYCLE (Probable ribonucleotide transport ATP-binding protein mkl OS=Mycobacterium leprae GN=mkl PE=3 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 2.021e-15
Identity = 44/119 (36.97%), Postives = 64/119 (53.78%), Query Frame = 2
Query:  386 VLIDCRNVYKSFGEKHILRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDKGEVYIRGTKRAGLIXDE--EISGLRIGLVFXSAALFDSLTVRENVGFLLYENSNMRDEPIHSL 736
            V I+ + + KSFG   I   V+  I  GE   ++GPSGTGKS  LK + GLL P++G + I GT        E  EI  L  G++F   ALF S+ + +N  F L E++  ++  I  +
Sbjct:   14 VAIEVKGLTKSFGSSRIWEDVTLDIPAGEVSVLLGPSGTGKSVFLKSLIGLLRPERGSILIDGTDIIECSAKELYEIRTL-FGVLFQDGALFGSMNLYDNTAFPLREHTKKKESEIRDI 131          

HSP 2 Score: 30.4166 bits (67), Expect = 2.021e-15
Identity = 13/29 (44.83%), Postives = 20/29 (68.97%), Query Frame = 1
Query:  733 LVNDNLRAVGSKGVEDRLPPELSGGMKKK 819
            +V + L+ VG  G E + P E+SGGM+K+
Sbjct:  131 IVMEKLQLVGLGGDEKKFPGEISGGMRKR 159          
BLAST of EY739244 vs. ExPASy Swiss-Prot
Match: CYSA_CHLVU (Probable sulfate/thiosulfate import ATP-binding protein cysA OS=Chlorella vulgaris GN=cysA PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 5.835e-15
Identity = 40/95 (42.11%), Postives = 59/95 (62.11%), Query Frame = 2
Query:  404 NVYKSFGEKHILRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDKGEVYIRGTKRAGLIXDEEISGLRIGLVFXSAALFDSLTVRENVGF 688
            N+ K FG    L  V+ +I++G  VG++GPSG+GKST+L+++AGL  PD G +++ G     +    ++    IG VF + ALF  LTV ENV F
Sbjct:    7 NISKRFGSFQALDRVNLEIKNGSLVGLLGPSGSGKSTLLRVLAGLEKPDSGRIWLEGQDATQM----KLQDREIGFVFQNYALFPHLTVSENVAF 97          

HSP 2 Score: 22.3274 bits (46), Expect = 5.835e-15
Identity = 10/30 (33.33%), Postives = 18/30 (60.00%), Query Frame = 1
Query:  736 VNDNLRAVGSKGVEDRLPPELSGGMKKKFA 825
            VN+ L+ +  +   D  P +LSGG +++ A
Sbjct:  113 VNELLKLMQLEKFGDSYPNQLSGGQRQRVA 142          
BLAST of EY739244 vs. ExPASy Swiss-Prot
Match: CYSA_MESVI (Probable sulfate/thiosulfate import ATP-binding protein cysA OS=Mesostigma viride GN=cysA PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.268e-15
Identity = 42/101 (41.58%), Postives = 63/101 (62.38%), Query Frame = 2
Query:  386 VLIDCRNVYKSFGEKHILRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDKGEVYIRGTKRAGLIXDEEISGLRIGLVFXSAALFDSLTVRENVGF 688
            +LID  N+ K FG    L  ++ +I+ G  + ++GPSG+GKST+L+IIAGL  PD+G ++I G   +G      I    IG VF + ALF ++TV +N+ F
Sbjct:    3 ILID--NISKKFGNFQALNHINLEIKSGSIIALLGPSGSGKSTLLRIIAGLDTPDEGTIWISGKNASGY----SIQSRNIGFVFQNYALFKNMTVYDNIAF 97          
BLAST of EY739244 vs. ExPASy Swiss-Prot
Match: MKL_MYCTU (Probable ribonucleotide transport ATP-binding protein mkl OS=Mycobacterium tuberculosis GN=mkl PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 7.482e-15
Identity = 44/119 (36.97%), Postives = 63/119 (52.94%), Query Frame = 2
Query:  386 VLIDCRNVYKSFGEKHILRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDKGEVYIRGTKRAGLIXDE--EISGLRIGLVFXSAALFDSLTVRENVGFLLYENSNMRDEPIHSL 736
            V I+   + KSFG   I   V+  I  GE   ++GPSGTGKS  LK + GLL P++G + I GT        E  EI  L  G++F   ALF S+ + +N  F L E++  ++  I  +
Sbjct:   26 VSIEVNGLTKSFGSSRIWEDVTLTIPAGEVSVLLGPSGTGKSVFLKSLIGLLRPERGSIIIDGTDIIECSAKELYEIRTL-FGVLFQDGALFGSMNLYDNTAFPLREHTKKKESEIRDI 143          

HSP 2 Score: 29.6462 bits (65), Expect = 7.482e-15
Identity = 13/29 (44.83%), Postives = 19/29 (65.52%), Query Frame = 1
Query:  733 LVNDNLRAVGSKGVEDRLPPELSGGMKKK 819
            +V + L  VG  G E + P E+SGGM+K+
Sbjct:  143 IVMEKLALVGLGGDEKKFPGEISGGMRKR 171          
BLAST of EY739244 vs. ExPASy Swiss-Prot
Match: MKL_MYCBO (Probable ribonucleotide transport ATP-binding protein mkl OS=Mycobacterium bovis GN=mkl PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 7.482e-15
Identity = 44/119 (36.97%), Postives = 63/119 (52.94%), Query Frame = 2
Query:  386 VLIDCRNVYKSFGEKHILRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDKGEVYIRGTKRAGLIXDE--EISGLRIGLVFXSAALFDSLTVRENVGFLLYENSNMRDEPIHSL 736
            V I+   + KSFG   I   V+  I  GE   ++GPSGTGKS  LK + GLL P++G + I GT        E  EI  L  G++F   ALF S+ + +N  F L E++  ++  I  +
Sbjct:   26 VSIEVNGLTKSFGSSRIWEDVTLTIPAGEVSVLLGPSGTGKSVFLKSLIGLLRPERGSIIIDGTDIIECSAKELYEIRTL-FGVLFQDGALFGSMNLYDNTAFPLREHTKKKESEIRDI 143          

HSP 2 Score: 29.6462 bits (65), Expect = 7.482e-15
Identity = 13/29 (44.83%), Postives = 19/29 (65.52%), Query Frame = 1
Query:  733 LVNDNLRAVGSKGVEDRLPPELSGGMKKK 819
            +V + L  VG  G E + P E+SGGM+K+
Sbjct:  143 IVMEKLALVGLGGDEKKFPGEISGGMRKR 171          
BLAST of EY739244 vs. ExPASy Swiss-Prot
Match: MALK_MANSM (Maltose/maltodextrin import ATP-binding protein malK OS=Mannheimia succiniciproducens (strain MBEL55E) GN=malK PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.824e-14
Identity = 50/118 (42.37%), Postives = 71/118 (60.17%), Query Frame = 2
Query:  392 IDCRNVYKSFGEKHILRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDKGEVYIRGTKRAGLIXDEEISGLRIGLVFXSAALFDSLTVRENVGF---LLYENSNMRDEPIHSL 736
            +  RNV KS+G+ HI + ++ +I  GE V  +GPSG GKST+L++IAGL     GE+YI G K   L+ D E S   IG+VF S AL+  L V +N+ F   L     N RD+ ++ +
Sbjct:    4 VSLRNVGKSYGDVHISKDINLEINEGEFVVFVGPSGCGKSTLLRMIAGLEDITTGELYI-GEK---LMNDVEPSKRGIGMVFQSYALYPHLDVADNMSFGLKLAGVKKNERDQRVNQV 117          
BLAST of EY739244 vs. ExPASy Swiss-Prot
Match: POTA_MYCMS (Spermidine/putrescine import ATP-binding protein potA OS=Mycoplasma mycoides subsp. mycoides SC GN=potA PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.134e-14
Identity = 39/110 (35.45%), Postives = 61/110 (55.45%), Query Frame = 2
Query:  389 LIDCRNVYKSFGEKHILRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDKGEVYIRGTKRAGLIXDEEISGLRIGLVFXSAALFDSLTVRENVGFLLYENSNMRD 718
            +++ RNV K +  + +L+G+SF ++ GE + ++GPSG GK+TILKII G   P+ GE+          +    I+  +   +F S ALF  L V +NV F L      +D
Sbjct:    5 ILELRNVTKEYDGQVVLKGISFNVKEGEFITLLGPSGCGKTTILKIIGGSQKPNSGEILFEDKN----LIPIPINKRQFNTIFQSYALFPHLNVFDNVAFGLTIKKTKKD 110          

HSP 2 Score: 27.335 bits (59), Expect = 2.134e-14
Identity = 12/26 (46.15%), Postives = 18/26 (69.23%), Query Frame = 1
Query:  748 LRAVGSKGVEDRLPPELSGGMKKKFA 825
            +R VG +G E++   ELSGG K++ A
Sbjct:  120 IRQVGLEGYENKKIDELSGGQKQRIA 145          
BLAST of EY739244 vs. ExPASy Swiss-Prot
Match: FBPC_HAES1 (Fe(3+) ions import ATP-binding protein fbpC OS=Haemophilus somnus (strain 129Pt) GN=fbpC PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 2.135e-14
Identity = 35/96 (36.46%), Postives = 61/96 (63.54%), Query Frame = 2
Query:  401 RNVYKSFGEKHILRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDKGEVYIRGTKRAGLIXDEEISGLRIGLVFXSAALFDSLTVRENVGF 688
            +N+ KSFG+  ++  ++  I+ G  V ++GPSG GK+T+L+++AGL +P +GE++I G      +    I    I +VF S ALF  +++ +NVG+
Sbjct:    9 KNITKSFGKSVVIDNLNLSIKRGSMVTLLGPSGCGKTTVLRLVAGLESPTEGEIFIDGED----VTKSSIQNRDICIVFQSYALFPHMSIGDNVGY 100          

HSP 2 Score: 25.409 bits (54), Expect = 2.135e-14
Identity = 12/32 (37.50%), Postives = 18/32 (56.25%), Query Frame = 1
Query:  730 QLVNDNLRAVGSKGVEDRLPPELSGGMKKKFA 825
            Q V + L  V   G EDR   ++SGG +++ A
Sbjct:  114 QRVKEALELVDLAGFEDRYVDQISGGQQQRVA 145          
The following BLAST results are available for this feature:
BLAST of EY739244 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 228
Match NameE-valueIdentityDescription
AB13I_ARATH2.765e-6672.73Protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplast... [more]
CYSA_BACHD2.020e-1538.54Sulfate/thiosulfate import ATP-binding protein cys... [more]
MKL_MYCLE2.021e-1536.97Probable ribonucleotide transport ATP-binding prot... [more]
CYSA_CHLVU5.835e-1542.11Probable sulfate/thiosulfate import ATP-binding pr... [more]
CYSA_MESVI6.268e-1541.58Probable sulfate/thiosulfate import ATP-binding pr... [more]
MKL_MYCTU7.482e-1536.97Probable ribonucleotide transport ATP-binding prot... [more]
MKL_MYCBO7.482e-1536.97Probable ribonucleotide transport ATP-binding prot... [more]
MALK_MANSM1.824e-1442.37Maltose/maltodextrin import ATP-binding protein ma... [more]
POTA_MYCMS2.134e-1435.45Spermidine/putrescine import ATP-binding protein p... [more]
FBPC_HAES12.135e-1436.46Fe(3+) ions import ATP-binding protein fbpC OS=Hae... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-053-H12-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY739244 ID=EY739244; Name=EY739244; organism=Citrus sinensis; type=EST; length=878bp
CACGCGTCCGCGAAAACACTTTTTATGTGAACTTCCATTGATTATTTTAT
TTTTTTCATTTTGTGGTTTTTAGACCAAATATCAATCTGCGTCTGCTTTA
CAATTATAAACACCGAAAATGGTCTCTTTATCTTCATCTGGTTCACTGTT
ATTTCCTCTCGCAACAAAAAGTGTTAGTTCTCGATTATCTAGACTTGCTA
ATTCGGACAAAAAACCGGTCAATTCGTTCTGTTATAAGGCGAAAGAAGAA
CAGAGAAAAGTTGTTTGTGCTTGTGTAGCGCCTCCAAGGGACTTGGGCAC
TGATGGATTCCCTGCCACCAAATTCAATGATTCATCTAAATCAGAGAATG
TAAATACCTTATTCGAACCCGAGGATGATGGTGATGTTCTCATCGATTGT
CGGAATGTTTACAAGTCATTTGGGGAAAAGCATATATTGAGAGGTGTGAG
CTTCAAGATTAGACATGGTGAAGCTGTTGGTATAATAGGGCCTTCAGGCA
CTGGGAAATCAACGATTTTAAAGATTATTGCTGGGCTTCTTGCTCCAGAC
AAGGGAGAGGTTTACATTCGAGGTACGAAGAGAGCTGGTTTGATTANCGA
TGAGGAGATATCTGGTCTTCGGATTGGATTGGTTTTCCANAGTGCGGCTC
TTTTTGACTCATTGACTGTCCGGGAAAATGTTGGTTTCCTTCTGTATGAA
AATTCGAACATGCGTGATGAACCAATTCACAGCTTGTGAACGACAATTTG
CGTGCTGTTGGATCAAAGGGAGTTGAGGATCGCTTACCACCTGAGTTGTC
TGGTGGAATGAAAAAAAAATTCGCTAACTCCAACCAAAATTTCCATAACA
CAACCGATCCCTCGAACCCCAGGTGCGG
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