EY727267

Overview
NameEY727267
Unique NameEY727267
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length871
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY727267 vs. ExPASy Swiss-Prot
Match: SRG1_ARATH (Protein SRG1 OS=Arabidopsis thaliana GN=SRG1 PE=2 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 1.361e-62
Identity = 120/264 (45.45%), Postives = 172/264 (65.15%), Query Frame = 1
Query:   52 MEAKATVIGSSLVEPSILDLANNQPLTTVPPRFVRLEIDHPLIRNDDTSTQQLPVIDMHRLLSGD--DSELEKLDNTCKEWGFFQLINHGVSSSLVEKVKAEIQDFFNLPIDEKKKFWQQPGDSEGFGQHFIASEEQKLDWGYGFTMVTLPTXXXXXXXXXXXXXXXXDDLEVYSTEIKNLTLKILDQMAKALRMDPNDMEELFE--NXMQAFRMNYYPPCLQPEKVVGHNSHCDASALTVLLQIMRWMASKLKKKEKGCWVNP 831
            MEAK     SS++ PS+ ++   + +TTVPPR+VR + D   + +D     ++P+IDM RL S    DSE+EKLD  CKEWGFFQL+NHG+ SS ++KVK+EIQDFFNLP++EKKKFWQ+P + EGFGQ F+ SE+QKLDW   F     P                 D LE+YS+E++++   ++ +MA+AL + P ++E+LF+  + +Q+ RMNYYPPC QP++V+G   H D+  LTVL+Q+      ++KK  K   V P
Sbjct:    1 MEAKGAAQWSSILVPSVQEMVKEKTITTVPPRYVRSDQDKTEVDDDFDVKIEIPIIDMKRLCSSTTMDSEVEKLDFACKEWGFFQLVNHGIDSSFLDKVKSEIQDFFNLPMEEKKKFWQRPDEIEGFGQAFVVSEDQKLDWADLFFHTVQPVELRKPHLFPKLPLPFRDTLEMYSSEVQSVAKILIAKMARALEIKPEELEKLFDDVDSVQSMRMNYYPPCPQPDQVIGLTPHSDSVGLTVLMQVNDVEGLQIKKDGKWVPVKP 264          
BLAST of EY727267 vs. ExPASy Swiss-Prot
Match: NCS1_COPJA (S-norcoclaurine synthase 1 OS=Coptis japonica GN=NCS1 PE=1 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 2.265e-33
Identity = 87/262 (33.21%), Postives = 132/262 (50.38%), Query Frame = 1
Query:   52 MEAKATVIGSSLVEPSILDLANNQPLTTVPPRFVRLEIDHPLIRNDDTSTQQLPVIDMHRLLSGDDS--ELEKLDNTCKEWGFFQLINHGVSSSLVEKVKAEIQDFFNLPIDEKKKFWQQPGDSEGFGQHFIASEEQKLDWGYGFTMVTLPTXXXXXXXXXXXXXXXXDDLEVYSTEIKNLTLKILDQMAKALRMDPNDMEELFENXMQAFRMNYYPPCLQPEKVVGHNSHCDASALTVLLQIMRWMASKLKKKEKGCWVNP 831
            M    T +G SL   ++  LA  + L  +P R+VR E++H  +   D S + +PVID+ RLL    +  EL K  + C +WGFFQLINHGV   ++EK+K + +DFF LP  EK  + Q P   EG+GQ F+ SEEQKLDW     ++T P                 + +E YS E++ + + +   MAK L ++   + +              P      + +G + H DA+ LT+L+Q+       +KK EK   + P
Sbjct:    1 MSKNLTGVGGSLPVENVQVLAGKE-LKNLPNRYVRPELEHDDVVPIDNSLE-IPVIDLSRLLDQQYACDELAKFHSACLDWGFFQLINHGVREEVIEKMKVDTEDFFRLPFKEKNAYRQLPNGMEGYGQAFVTSEEQKLDWADMHFLITKPVQERNMRFWPTSPTSFRETMEKYSMELQKVAMCLTGMMAKNLGLESEILTKPLRTVFNR-EDELLPSMSSCGEGLGLSPHSDATGLTLLIQVNEVNGLHIKKDEKWVPIKP 259          
BLAST of EY727267 vs. ExPASy Swiss-Prot
Match: GAOX3_ARATH (Gibberellin 20 oxidase 3 OS=Arabidopsis thaliana GN=20ox3 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.775e-23
Identity = 72/243 (29.63%), Postives = 113/243 (46.50%), Query Frame = 1
Query:   79 SSLVEPSILDLANNQPLTTVPPRFVRLEIDHPLIRNDDTSTQQLPVIDMHRLLSGDD---SELEKL-DNTCKEWGFFQLINHGVSSSLVEKVKAEIQDFFNLPIDEKKKFWQQPGDSEGFGQHFIASEEQKLDWGYGFTMVTLPTXXXXXXXXXXXXXXXXDD--------LEVYSTEIKNLTLKILDQMAKALRMDPNDMEELFENXMQAFRMNYYPPCLQPEKVVGHNSHCDASALTVLLQ 771
            SS+ +  +L    NQ    +P +FV  + + P   + D    Q+P+ID+   LSGD    SE  +L      + GFF + NHGV  SL+ +    +  FF  P  EK+K  ++ G+S G+   F+     KL W    +    P                  D         + Y+  +  L+LKI++ +  +L ++    +E FE+    FR+NYYP C QPE  +G   HCD ++LT+L Q
Sbjct:   22 SSIFDAKLL----NQHSHHIPQQFVWPDHEKP---STDVQPLQVPLIDLAGFLSGDSCLASEATRLVSKAATKHGFFLITNHGVDESLLSRAYLHMDSFFKAPACEKQKAQRKWGESSGYASSFVGRFSSKLPWKETLSFKFSPEEKIHSQTVKDFVSKKMGDGYEDFGKVYQEYAEAMNTLSLKIMELLGMSLGVERRYFKEFFEDSDSIFRLNYYPQCKQPELALGTGPHCDPTSLTILHQ 257          
BLAST of EY727267 vs. ExPASy Swiss-Prot
Match: GAO1D_WHEAT (Gibberellin 20 oxidase 1-D OS=Triticum aestivum GN=GA20ox1D PE=1 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.799e-22
Identity = 67/238 (28.15%), Postives = 117/238 (49.16%), Query Frame = 1
Query:   85 LVEPSILDLANNQPLTTVPPRFVRLEIDHPLIRNDDTSTQQLPVIDMHRLLSGDDS---ELEKL-DNTCKEWGFFQLINHGVSSSLVEKVKAEIQDFFNLPIDEKKKFWQQPGDSEGFGQHFIASEEQKLDWGYGFTMVTLPTXXXXXXXXXXXXXXXXDDL--EVYS---TEIKNLTLKILDQMAKALRMDPNDMEELFENXMQAFRMNYYPPCLQPEKVVGHNSHCDASALTVLLQ 771
            +V+P + D A       +P +F+  E + P    D      +P+ID+  +LSGD +   E+ +L    C+  GFFQ++NHG+ + L+      + +FF +P+ EK++  + PG+S G+   F      KL W    +  + P+                     EVY+   +E+  L+L+I++ + ++L +        FE      R+NYYPPC +P + +G   HCD ++LT+L Q
Sbjct:    1 MVQP-VFDAAVLSGRADIPSQFIWPEGESPT--PDAAEELHVPLIDIGGMLSGDPAAAAEVTRLVGEACERHGFFQVVNHGIDAELLADAHRCVDNFFTMPLPEKQRALRHPGESCGYASSFTGRFASKLPWKETLSFRSCPSDPALVVDYIVATLGEDHRRLGEVYARYCSEMSRLSLEIMEVLGESLGVGRAHYRRFFEGNDSIMRLNYYPPCQRPLETLGTGPHCDPTSLTILHQ 235          
BLAST of EY727267 vs. ExPASy Swiss-Prot
Match: GAO1B_WHEAT (Gibberellin 20 oxidase 1-B OS=Triticum aestivum GN=GA20ox1B PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.349e-22
Identity = 67/238 (28.15%), Postives = 117/238 (49.16%), Query Frame = 1
Query:   85 LVEPSILDLANNQPLTTVPPRFVRLEIDHPLIRNDDTSTQQLPVIDMHRLLSGDD---SELEKL-DNTCKEWGFFQLINHGVSSSLVEKVKAEIQDFFNLPIDEKKKFWQQPGDSEGFGQHFIASEEQKLDWGYGFTMVTLPTXXXXXXXXXXXXXXXXDDL--EVYS---TEIKNLTLKILDQMAKALRMDPNDMEELFENXMQAFRMNYYPPCLQPEKVVGHNSHCDASALTVLLQ 771
            +V+P + D A       +P +F+  E + P    D      +P+ID+  +LSGD    +E+ +L    C+  GFFQ++NHG+ + L+      +  FF +P+ EK++  ++PG+S G+   F      KL W    +  + P+                     EVY+   +E+  L+L+I++ + ++L +        FE      R+NYYPPC +P + +G   HCD ++LT+L Q
Sbjct:    1 MVQP-VFDAAVLSGRADIPSQFIWPEGESPT--PDAAEELHVPLIDIGGMLSGDPRATAEVTRLVGEACERHGFFQVVNHGIDAELLADAHRCVDAFFTMPLPEKQRALRRPGESCGYASSFTGRFASKLPWKETLSFRSCPSDPALVVDYIVATLGEDHRRLGEVYARYCSEMSRLSLEIMEVLGESLGVGRAHYRRFFEGNDSIMRLNYYPPCQRPMETLGTGPHCDPTSLTILHQ 235          
BLAST of EY727267 vs. ExPASy Swiss-Prot
Match: GAOX1_ARATH (Gibberellin 20 oxidase 1 OS=Arabidopsis thaliana GN=20ox1 PE=2 SV=2)

HSP 1 Score: 105.916 bits (263), Expect = 3.068e-22
Identity = 64/239 (26.78%), Postives = 112/239 (46.86%), Query Frame = 1
Query:   85 LVEPSILDLANNQPLTTVPPRFVRLEIDHPLIRNDDTSTQQLPVIDMHRLLSGDDSELEK---LDNTCKEWGFFQLINHGVSSSLVEKVKAEIQDFFNLPIDEKKKFWQQPGDSEGFGQHFIASEEQKLDWGYGFTM-------VTLPTXXXXXXXXXXXXXXXXDDLEVYSTEIKNLTLKILDQMAKALRMDPNDMEELFENXMQAFRMNYYPPCLQPEKVVGHNSHCDASALTVLLQ 771
            +  PS+L+L  N     +P +F+  + + P I   +     +P+ID+  LLS   S L+    +   CK+ GFF ++NHG+S  L+         FF++P+ EK++  ++ G+S G+   F      KL W    +         +                      + Y   + +L+LKI++ +  +L +  +   E FE      R+NYYPPC++P+  +G   HCD ++LT+L Q
Sbjct:   28 IFNPSMLNLQAN-----IPNQFIWPDDEKPSI---NVLELDVPLIDLQNLLSDPSSTLDASRLISEACKKHGFFLVVNHGISEELISDAHEYTSRFFDMPLSEKQRVLRKSGESVGYASSFTGRFSTKLPWKETLSFRFCDDMSRSKSVQDYFCDALGHGFQPFGKVYQEYCEAMSSLSLKIMELLGLSLGVKRDYFREFFEENDSIMRLNYYPPCIKPDLTLGTGPHCDPTSLTILHQ 258          
BLAST of EY727267 vs. ExPASy Swiss-Prot
Match: LDOX_PERFR (Leucoanthocyanidin dioxygenase OS=Perilla frutescens GN=ANS PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 8.927e-22
Identity = 69/243 (28.40%), Postives = 115/243 (47.33%), Query Frame = 1
Query:   94 PSILDLANNQPLTTVPPRFVRLE------IDHPLIRNDDTSTQQLPVIDMHRLLSGDDSELEK----LDNTCKEWGFFQLINHGVSSSLVEKVKAEIQDFFNLPIDEKKKFW--QQPGDSEGFGQHFIASEEQKLDWGYGFTMVTLPTXXXXXXXXXXXXXXXXDDLEVYSTEIKNLTLKILDQMAKALRMDPNDMEELF---ENXMQAFRMNYYPPCLQPEKVVGHNSHCDASALTVLLQIM 777
            P + +LA +  L T+P  +VR E      I + L     +   QLP ID+  + S D+   +K    L     +WG   LINHG+   L+++VKA  ++FF LP++EK+ +   Q  G+ +G+G     +   +L+W   F     P                      Y+ +++ L  KIL  ++  L ++   +E+     E+ +   ++N+YP C QPE  +G  +H D SALT +L  M
Sbjct:   10 PRVEELARSG-LDTIPKDYVRPEEELKSIIGNILAEEKSSEGPQLPTIDLEEMDSRDEEGRKKCHEELKKAATDWGVMHLINHGIPEELIDRVKAAGKEFFELPVEEKEAYANDQAAGNVQGYGSKLANNASGQLEWEDYFFHCVYPEHKTDLSIWPTKPPDYIPATSEYAKQLRALATKILSVLSIGLGLEKGRLEKEVGGAEDLIVQMKINFYPKCPQPELALGWEAHTDVSALTFILHNM 251          
BLAST of EY727267 vs. ExPASy Swiss-Prot
Match: GAO1A_WHEAT (Gibberellin 20 oxidase 1-A OS=Triticum aestivum GN=GA20ox1A PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 8.927e-22
Identity = 66/238 (27.73%), Postives = 118/238 (49.58%), Query Frame = 1
Query:   85 LVEPSILDLANNQPLTTVPPRFVRLEIDHPLIRNDDTSTQQLPVIDMHRLLSGDDS---ELEKL-DNTCKEWGFFQLINHGVSSSLVEKVKAEIQDFFNLPIDEKKKFWQQPGDSEGFGQHFIASEEQKLDWGYGFTMVTLPTXXXXXXXXXXXXXXXXDDL--EVYS---TEIKNLTLKILDQMAKALRMDPNDMEELFENXMQAFRMNYYPPCLQPEKVVGHNSHCDASALTVLLQ 771
            +V P + D A     + +P +F+  E + P    D      +P+I++  +LSGD +   E+ +L    C+  GFFQ++NHG+ + L+      + +FF +P+ EK++  ++PG+S G+   F      KL W    +  + P+                     EVY+   +E+  L+L+I++ + ++L +        FE      R+NYYPPC +P + +G   HCD ++LT+L Q
Sbjct:    1 MVRP-VFDAAVLSGRSDIPSQFIWPEGESPT--PDAAEELHVPLINIGGMLSGDAAAAAEVTRLVGEACERHGFFQVVNHGIDAELLADAHRCVDNFFTMPLPEKQRALRRPGESCGYASSFTGRFASKLPWKETLSFRSCPSDPALVVDYIVATLGEDHRRLGEVYARYCSEMSRLSLEIMEVLGESLGVGRAHYRRFFEGNDSIMRLNYYPPCQRPLETLGTGPHCDPTSLTILHQ 235          
BLAST of EY727267 vs. ExPASy Swiss-Prot
Match: LDOX_MALDO (Leucoanthocyanidin dioxygenase OS=Malus domestica GN=ANS PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.597e-21
Identity = 66/250 (26.40%), Postives = 117/250 (46.80%), Query Frame = 1
Query:   70 VIGSSLVEPSILDLANNQPLTTVPPRFVR-----LEIDHPLIRNDDTSTQQLPVIDMHRLLSGDDSEL----EKLDNTCKEWGFFQLINHGVSSSLVEKVKAEIQDFFNLPIDEKKKFW--QQPGDSEGFGQHFIASEEQKLDWGYGFTMVTLPTXXXXXXXXXXXXXXXXDDLEVYSTEIKNLTLKILDQMAKALRMDPNDMEEL---FENXMQAFRMNYYPPCLQPEKVVGHNSHCDASALTVLLQIM 777
            ++ S  V   +  LA +  ++T+P  ++R     + I     +  +    Q+P ID+  + S ++       EKL     +WG   L+NHG+S  L++KV+   + FF+LPI++K+K+   Q  G  +G+G     +   +L+W   F     P                 +    Y+ +++ L  K+L  ++  L +D   +E+     E  +   ++NYYP C QPE  +G  +H D SALT +L  M
Sbjct:    1 MVSSDSVNSRVETLAGSG-ISTIPKEYIRPKDELVNIGDIFEQEKNNEGPQVPTIDLKEIESDNEKVRAKCREKLKKAAVDWGVMHLVNHGISDELMDKVRKAGKAFFDLPIEQKEKYANDQASGKIQGYGSKLANNASGQLEWEDYFFHCVYPEDKRDLSIWPQTPADYIEATAEYAKQLRELATKVLKVLSLGLGLDEGRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHNM 249          
BLAST of EY727267 vs. ExPASy Swiss-Prot
Match: FNSI_PETCR (Flavone synthase OS=Petroselinum crispum GN=FNSI PE=1 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.597e-21
Identity = 60/216 (27.78%), Postives = 105/216 (48.61%), Query Frame = 1
Query:  148 FVRLEIDHPLIRNDDTSTQQLPVIDMHRLLSGDDSE------LEKLDNTCKEWGFFQLINHGVSSSLVEKVKAEIQDFFNLPIDEKKKFWQQPGDSEGFGQHFIASEEQKLDWGYGFTMVTLPTXXXXXXXXXXXXXXXXDDLEVYSTEIKNLTLKILDQMAKALRMDPNDMEELFENXMQAFRMNYYPPCLQPEKVVGHNSHCDASALTVLLQIM 777
            FVR E + P +  +  S + +P+I +  L   DDS+        K+   C++WG FQ+++HG+ S L+ ++    ++FF LP +EK ++    G   GF    +   +  +DW    T  + P                    EVYS ++  L  K+L+ +++A+ ++  D+ +   +  Q   +NYYP C QP+  +G   H D   +T+LLQ M
Sbjct:   19 FVRDEDERPKVAYNQFSNE-IPIISLAGL--DDDSDGRRPEICRKIVKACEDWGIFQVVDHGIDSGLISEMTRLSREFFALPAEEKLEYDTTGGKRGGFTISTVLQGDDAMDWREFVTYFSYPINARDYSRWPKKPEGWRSTTEVYSEKLMVLGAKLLEVLSEAMGLEKGDLTKACVDMEQKVLINYYPTCPQPDLTLGVRRHTDPGTITILLQDM 231          
The following BLAST results are available for this feature:
BLAST of EY727267 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 68
Match NameE-valueIdentityDescription
SRG1_ARATH1.361e-6245.45Protein SRG1 OS=Arabidopsis thaliana GN=SRG1 PE=2 ... [more]
NCS1_COPJA2.265e-3333.21S-norcoclaurine synthase 1 OS=Coptis japonica GN=N... [more]
GAOX3_ARATH2.775e-2329.63Gibberellin 20 oxidase 3 OS=Arabidopsis thaliana G... [more]
GAO1D_WHEAT1.799e-2228.15Gibberellin 20 oxidase 1-D OS=Triticum aestivum GN... [more]
GAO1B_WHEAT2.349e-2228.15Gibberellin 20 oxidase 1-B OS=Triticum aestivum GN... [more]
GAOX1_ARATH3.068e-2226.78Gibberellin 20 oxidase 1 OS=Arabidopsis thaliana G... [more]
LDOX_PERFR8.927e-2228.40Leucoanthocyanidin dioxygenase OS=Perilla frutesce... [more]
GAO1A_WHEAT8.927e-2227.73Gibberellin 20 oxidase 1-A OS=Triticum aestivum GN... [more]
LDOX_MALDO2.597e-2126.40Leucoanthocyanidin dioxygenase OS=Malus domestica ... [more]
FNSI_PETCR2.597e-2127.78Flavone synthase OS=Petroselinum crispum GN=FNSI P... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-703-068-B09-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY727267 ID=EY727267; Name=EY727267; organism=Citrus sinensis; type=EST; length=871bp
TCCGACCCACGCGTCCGAAGAAAACAAAAAGGTAATTTAAATCTACACAA
TATGGAGGCAAAAGCAACAGTGATTGGGAGTTCTCTCGTGGAGCCTTCGA
TTCTGGACCTGGCAAATAATCAGCCACTGACCACTGTTCCGCCACGTTTC
GTTCGCCTTGAGATAGACCATCCCTTGATTCGCAACGACGATACTTCAAC
ACAACAACTTCCAGTTATCGACATGCACAGGTTGCTCTCTGGAGATGACT
CAGAGCTTGAGAAGCTTGACAATACATGTAAAGAGTGGGGTTTCTTTCAG
TTGATTAATCATGGAGTTAGCAGTTCATTGGTGGAGAAAGTGAAAGCAGA
GATTCAAGACTTCTTTAATCTTCCAATTGATGAGAAAAAGAAGTTTTGGC
AACAACCAGGAGATAGTGAGGGATTTGGGCAGCACTTTATTGCGTCTGAA
GAGCAGAAGCTTGATTGGGGATACGGCTTTACTATGGTCACTCTCCCAAC
TCATCTGAGGAAACCCCACTTGTTCCCTAAGTTGCCTCTTCCATTCAGAG
ATGACTTGGAAGTTTACTCAACAGAAATTAAAAATCTTACCCTGAAAATC
CTTGACCAAATGGCTAAAGCTCTAAGAATGGATCCCAATGATATGGAAGA
GTTGTTTGAAAACNGGATGCAAGCATTCAGGATGAATTATTATCCTCCTT
GTCTGCAACCAGAAAAAGTTGTCGGGCATAATTCTCATTGTGATGCCTCC
GCACTCACCGTCCTCCTCCAAATCATGAGATGGATGGCCTCCAAATTAAA
AAAGAAGGAAAAGGGTTGCTGGGTAAACCCTTCCGCATGGCTTGGTGGCC
CACCTGGGGGGGCGTTATAGA
back to top