EY684230

Overview
NameEY684230
Unique NameEY684230
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1013
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684230 vs. ExPASy Swiss-Prot
Match: RFS6_ARATH (Probable galactinol--sucrose galactosyltransferase 6 OS=Arabidopsis thaliana GN=RFS6 PE=2 SV=2)

HSP 1 Score: 245.743 bits (626), Expect = 3.096e-64
Identity = 119/169 (70.41%), Postives = 132/169 (78.11%), Query Frame = 2
Query:   11 DGVKVDVLLRLETLGAGLCGTLELTRQYHQALDASVARNFPDNGCIACMSHNTDALYCSKQTAIVRASDDFYPRDPTSHTIHIAAVAYNSVFLGEIMRPDWDMFHSLHPAAEYHGSARAISGGPIYDRDAPGKHKL*GC*RNYCCQMGQFFQDACLGRPTHDLPLLGPS 517
            DGVKVDV   LETLG GL G +ELTRQ+HQALD+SVA+NFPDNGCIACMSHNTDALYCSKQ A++RASDDFYPRDP SHTIHIA+VAYNSVFLGE M+PDWDMFHS+HPAAEYH SARAISGGP+Y  D+PGKH      R      G   +    GRPT D     P+
Sbjct:  378 DGVKVDVQCVLETLGGGLGGRVELTRQFHQALDSSVAKNFPDNGCIACMSHNTDALYCSKQAAVIRASDDFYPRDPVSHTIHIASVAYNSVFLGEFMQPDWDMFHSVHPAAEYHASARAISGGPLYVSDSPGKHNF-ELLRKLVLPDGSILRARLPGRPTRDCLFADPA 545          
BLAST of EY684230 vs. ExPASy Swiss-Prot
Match: RFS2_ARATH (Probable galactinol--sucrose galactosyltransferase 2 OS=Arabidopsis thaliana GN=RFS2 PE=2 SV=2)

HSP 1 Score: 217.624 bits (553), Expect = 9.030e-56
Identity = 108/169 (63.91%), Postives = 121/169 (71.60%), Query Frame = 2
Query:   11 DGVKVDVLLRLETLGAGLCGTLELTRQYHQALDASVARNFPDNGCIACMSHNTDALYCSKQTAIVRASDDFYPRDPTSHTIHIAAVAYNSVFLGEIMRPDWDMFHSLHPAAEYHGSARAISGGPIYDRDAPGKHKL*GC*RNYCCQMGQFFQDACLGRPTHDLPLLGPS 517
            DGVKVDV   +ETLGAGL G + LTR Y QAL+AS+ARNF DNGCI+CM HNTD LY +KQTAIVRASDDFYPRDP SHTIHIA+VAYNS+FLGE M+PDWDMFHSLHP AEYH +ARA+ G  IY  D PG H      R      G   +    GRPT D     P+
Sbjct:  380 DGVKVDVQNIIETLGAGLGGRVSLTRSYQQALEASIARNFTDNGCISCMCHNTDGLYSAKQTAIVRASDDFYPRDPASHTIHIASVAYNSLFLGEFMQPDWDMFHSLHPTAEYHAAARAVGGCAIYVSDKPGNHNF-DLLRKLVLPDGSVLRAKLPGRPTRDCLFADPA 547          
BLAST of EY684230 vs. ExPASy Swiss-Prot
Match: RFS1_ARATH (Probable galactinol--sucrose galactosyltransferase 1 OS=Arabidopsis thaliana GN=RFS1 PE=2 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 8.451e-54
Identity = 101/162 (62.35%), Postives = 123/162 (75.93%), Query Frame = 2
Query:   11 DGVKVDVLLRLETLGAGLCGTLELTRQYHQALDASVARNFPDNGCIACMSHNTDALYCSKQTAIVRASDDFYPRDPTSHTIHIAAVAYNSVFLGEIMRPDWDMFHSLHPAAEYHGSARAISGGPIYDRDAPGKHKL*GC*RNYCCQMGQFFQDACLGRPTHD 496
            DGVKVDV   LETLGAG  G ++L ++YHQAL+AS++RNFPDNG I+CMSHNTD LY +K+TA++RASDDF+PRDP SHTIHIA+VAYN++FLGE M+PDWDMFHSLHP AEYH +ARA+ G  IY  D PG+H      R    + G   +    GRPT D
Sbjct:  384 DGVKVDVQNILETLGAGHGGRVKLAKKYHQALEASISRNFPDNGIISCMSHNTDGLYSAKKTAVIRASDDFWPRDPASHTIHIASVAYNTLFLGEFMQPDWDMFHSLHPMAEYHAAARAVGGCAIYVSDKPGQHDF-NLLRKLVLRDGSILRAKLPGRPTSD 544          
BLAST of EY684230 vs. ExPASy Swiss-Prot
Match: RFS5_ARATH (Probable galactinol--sucrose galactosyltransferase 5 OS=Arabidopsis thaliana GN=RFS5 PE=1 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 4.371e-26
Identity = 62/143 (43.36%), Postives = 86/143 (60.14%), Query Frame = 2
Query:   11 DGVKVDVLLRLETLGAGLCGTLELTRQYHQALDASVARNFPDNGCIACMSHNTDALYCSKQT-AIVRASDDFYPRDPTSHT--------IHIAAVAYNSVFLGEIMRPDWDMFHSLHPAAEYHGSARAISGGPIYDRDAPGKH 412
            DGVKVDV+  LE L     G ++L + Y +AL +SV ++F  NG IA M H  D ++   +  ++ R  DDF+  DP+            H+   AYNS+++G  ++PDWDMF S HP AE+H ++RAISGGPIY  D  GKH
Sbjct:  408 DGVKVDVIHILEMLCQKYGGRVDLAKAYFKALTSSVNKHFNGNGVIASMEHCNDFMFLGTEAISLGRVGDDFWCTDPSGDPNGTFWLQGCHMVHCAYNSLWMGNFIQPDWDMFQSTHPCAEFHAASRAISGGPIYISDCVGKH 550          
BLAST of EY684230 vs. ExPASy Swiss-Prot
Match: RFS_PEA (Galactinol--sucrose galactosyltransferase OS=Pisum sativum GN=RFS PE=1 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 9.737e-26
Identity = 62/143 (43.36%), Postives = 85/143 (59.44%), Query Frame = 2
Query:   11 DGVKVDVLLRLETLGAGLCGTLELTRQYHQALDASVARNFPDNGCIACMSHNTDA-LYCSKQTAIVRASDDFYPRDPTSHT--------IHIAAVAYNSVFLGEIMRPDWDMFHSLHPAAEYHGSARAISGGPIYDRDAPGKH 412
            DGVKVDV+  LE L     G +EL + Y++AL +SV ++F  NG IA M H  D  L  ++  ++ R  DDF+  DP+            H+   AYNS+++G  + PDWDMF S HP AE+H ++RAISGGP+Y  D  G H
Sbjct:  421 DGVKVDVIHLLELLSEEYGGRVELAKAYYKALTSSVNKHFKGNGVIASMEHCNDFFLLGTEAISLGRVGDDFWCCDPSGDPNGTYWLQGCHMVHCAYNSLWMGNFIHPDWDMFQSTHPCAEFHAASRAISGGPVYVSDCVGNH 563          
BLAST of EY684230 vs. ExPASy Swiss-Prot
Match: RFS_ORYSJ (Galactinol--sucrose galactosyltransferase OS=Oryza sativa subsp. japonica GN=RFS PE=1 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 4.091e-24
Identity = 61/143 (42.66%), Postives = 81/143 (56.64%), Query Frame = 2
Query:   11 DGVKVDVLLRLETLGAGLCGTLELTRQYHQALDASVARNFPDNGCIACMSHNTD-ALYCSKQTAIVRASDDFYPRDPTSHT--------IHIAAVAYNSVFLGEIMRPDWDMFHSLHPAAEYHGSARAISGGPIYDRDAPGKH 412
            DGVKVDV+  LE +     G +EL + Y   L  SV R+F  NG IA M H  D  L  ++  A+ R  DDF+  DP+            H+   AYNS+++G  + PDWDMF S HP A +H ++RA+SGGP+Y  DA G H
Sbjct:  406 DGVKVDVIHLLEMVCEEYGGRVELAKAYFAGLTESVRRHFNGNGVIASMEHCNDFMLLGTEAVALGRVGDDFWCTDPSGDPDGTFWLQGCHMVHCAYNSLWMGAFIHPDWDMFQSTHPCAAFHAASRAVSGGPVYVSDAVGCH 548          
BLAST of EY684230 vs. ExPASy Swiss-Prot
Match: STSYN_PEA (Stachyose synthase OS=Pisum sativum GN=STS1 PE=1 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 4.523e-23
Identity = 56/142 (39.44%), Postives = 84/142 (59.15%), Query Frame = 2
Query:   14 GVKVDVLLRLETLGAGLCGTLELTRQYHQALDASVARNFPDNGCIACMSHNTDALYC-SKQTAIVRASDDFYPRDPTSHT--------IHIAAVAYNSVFLGEIMRPDWDMFHSLHPAAEYHGSARAISGGPIYDRDAPGKH 412
            GVKVDV+  LE +     G ++L + Y++ L  S+ +NF  NG IA M H  D  +  +KQ ++ R  DDF+ +DP            +H+   +YNS+++G++++PDWDMF S H  A++H  +RAI GGPIY  D  G H
Sbjct:  477 GVKVDVIHSLEYVCDEYGGRVDLAKVYYEGLTKSIVKNFNGNGMIASMQHCNDFFFLGTKQISMGRVGDDFWFQDPNGDPMGSFWLQGVHMIHCSYNSLWMGQMIQPDWDMFQSDHVCAKFHAGSRAICGGPIYVSDNVGSH 618          
BLAST of EY684230 vs. ExPASy Swiss-Prot
Match: RFS4_ARATH (Probable galactinol--sucrose galactosyltransferase 4 OS=Arabidopsis thaliana GN=RFS4 PE=2 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 4.233e-21
Identity = 54/141 (38.30%), Postives = 80/141 (56.74%), Query Frame = 2
Query:   14 GVKVDVLLRLETLGAGLCGTLELTRQYHQALDASVARNFPDNGCIACMSHNTDALY-CSKQTAIVRASDDFYPRDPTSHT--------IHIAAVAYNSVFLGEIMRPDWDMFHSLHPAAEYHGSARAISGGPIYDRDAPGK 409
            G K+DV   LE+L     G +EL + Y+  L  S+ +NF     IA M    +  +  +KQ +I R  DDF+ +DP            +H+   +YNS+++G++++PDWDMF S H  AEYH ++RAI GGP+Y  D  GK
Sbjct:  493 GAKIDVFQTLESLAEEHGGRVELAKAYYDGLTESMIKNFNGTDVIASMQQCNEFFFLATKQISIGRVGDDFWWQDPYGDPQGVYWLQGVHMIHCSYNSIWMGQMIQPDWDMFQSDHVCAEYHAASRAICGGPVYLSDHLGK 633          
The following BLAST results are available for this feature:
BLAST of EY684230 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
RFS6_ARATH3.096e-6470.41Probable galactinol--sucrose galactosyltransferase... [more]
RFS2_ARATH9.030e-5663.91Probable galactinol--sucrose galactosyltransferase... [more]
RFS1_ARATH8.451e-5462.35Probable galactinol--sucrose galactosyltransferase... [more]
RFS5_ARATH4.371e-2643.36Probable galactinol--sucrose galactosyltransferase... [more]
RFS_PEA9.737e-2643.36Galactinol--sucrose galactosyltransferase OS=Pisum... [more]
RFS_ORYSJ4.091e-2442.66Galactinol--sucrose galactosyltransferase OS=Oryza... [more]
STSYN_PEA4.523e-2339.44Stachyose synthase OS=Pisum sativum GN=STS1 PE=1 S... [more]
RFS4_ARATH4.233e-2138.30Probable galactinol--sucrose galactosyltransferase... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-650-054-F02-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684230 ID=EY684230; Name=EY684230; organism=Citrus sinensis; type=EST; length=1013bp
CACGCTTCCGGACGGTGTTAAGGTGGACGTCCTTTTAAGATTGGAGACGC
TTGGTGCTGGCTTATGTGGCACCCTTGAGTTGACCAGACAGTATCATCAA
GCGCTTGATGCGTCGGTTGCCAGGAACTTCCCTGATAATGGGTGCATTGC
GTGCATGAGTCACAATACTGATGCACTCTACTGCTCAAAACAAACTGCTA
TAGTGAGAGCATCAGATGATTTCTACCCACGTGATCCGACATCACACACC
ATTCATATTGCAGCTGTCGCATACAACAGTGTGTTCTTGGGAGAAATCAT
GCGGCCTGATTGGGACATGTTCCACTCCCTTCATCCAGCTGCTGAGTATC
ACGGATCGGCCCGTGCTATAAGTGGTGGGCCCATTTACGATCGTGATGCG
CCCGGGAAACACAAACTTTGAGGCTGCTAAAGAAATTATTGCTGCCAGAT
GGGTCAATTCTTCCAGGACGCTTGCCTGGGAAGGCCCACACACGATTTGC
CTCTTCTCGGACCCAGCCCCGTGATCGTGTCAACTTGTTGAAGATATGGA
AAAATGTAATAATAACACGGGGGTGCTGGGGTGTTTTAAATATGCAAAAG
GAACGGCTTGGAAAATAAAATTGAAAGGGAATAAACTATTTTCCTCCAAA
ACCCTCAATAGAAGCCAATAACAGGGGGCAAAAATAAGGGCCCGTGTAAA
TGTCACCACTCATTAGCTTAATACTTGCCCACGAACCCCCAAATTGAGAA
AGGGGAAGTGGAGCTCATCCACTTTGTCACCGAAATCAGATGAAAACCAC
CCTACCCCTACACATATCCTTATGAACAAACAATACCAGCAATGACCCCT
TTATAAAATCATTTTACAAACAGAAAAACATCCCTCCAATGGCCATGCCC
ACCTAATATTATTTTTTAATACCCCACGGAAATGTAATGAATTTTAGCGC
GACAATAGGGGGGGATTCGGGCATCGACAGGGAGTGATGAACCAGATGGG
GTGGGCGGAGCGG
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