FC922190

Overview
NameFC922190
Unique NameFC922190
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length568
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC922190 vs. ExPASy Swiss-Prot
Match: DGDG2_ARATH (Digalactosyldiacylglycerol synthase 2, chloroplastic OS=Arabidopsis thaliana GN=DGD2 PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 3.278e-35
Identity = 72/128 (56.25%), Postives = 89/128 (69.53%), Query Frame = -1
Query:  185 NHPSNDFFKQFPNCRTYDDRNGFVXXXXXXXXXXXXXXXXAQRHQLSWESATERFLQVSELDQAVVXXXXXXXXKHFASTSLNLKKNMEEASAYVHFLASGFETSRRAFGAIPGSLHPDEELCKELGL 568
            NH SN FFKQFPNCRTYDD  GFV                 QRH+LSWE+AT+RF++VS+L++             FAS+S+++ KN+E+ SAY+HFLASGFE SR AFGAIPGSL PDEELC++LGL
Sbjct:  333 NHISNKFFKQFPNCRTYDDGQGFVRATLKALGEQPSQLTEQQRHELSWEAATQRFIKVSDLNRLSRADSNLSKRSVFASSSISVGKNLEDMSAYIHFLASGFEASRTAFGAIPGSLQPDEELCRDLGL 460          
BLAST of FC922190 vs. ExPASy Swiss-Prot
Match: DGDG2_SOYBN (Digalactosyldiacylglycerol synthase 2, chloroplastic OS=Glycine max GN=DGD2 PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 1.799e-33
Identity = 74/134 (55.22%), Postives = 90/134 (67.16%), Query Frame = -1
Query:  167 NHPSNDFFKQFPNCRTYDDRNGFVXXXXXXXXXXXXXXXXAQRHQLSWESATERFLQVSELDQAVVXXXXXXXXKHFASTSLNLKKNMEEASAYVHFLASGFETSRRAFGAIPGSLHPDEELCKELGLVTPMSK 568
            NHPSNDFFKQFPNC TYDD +GFV                AQRH LSWE+AT+RFL+ ++LD+ +          +F + SLNL++ ++EASAYVH +ASGFE SRR FGAIP SL PDEEL KELGL    +K
Sbjct:  331 NHPSNDFFKQFPNCWTYDDDDGFVKLTLKALAEQPAQPTDAQRHDLSWEAATKRFLKAADLDKPL-ERKLSRTTSNFLAASLNLQEKVDEASAYVHHVASGFEVSRRIFGAIPDSLQPDEELRKELGLTDASTK 463          
BLAST of FC922190 vs. ExPASy Swiss-Prot
Match: DGDG2_LOTJA (Digalactosyldiacylglycerol synthase 2, chloroplastic OS=Lotus japonicus GN=DGD2 PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 7.557e-32
Identity = 72/128 (56.25%), Postives = 86/128 (67.19%), Query Frame = -1
Query:  185 NHPSNDFFKQFPNCRTYDDRNGFVXXXXXXXXXXXXXXXXAQRHQLSWESATERFLQVSELDQAVVXXXXXXXXKHFASTSLNLKKNMEEASAYVHFLASGFETSRRAFGAIPGSLHPDEELCKELGL 568
            NH SN+FFKQFPNC T+D+  GFV                AQRH LSWE+ATERFL+ +ELD+            +  STSLNL++ +++ASAYVH +ASGFE SRR FGAIPGSL PDEEL KELGL
Sbjct:  331 NHCSNEFFKQFPNCWTFDESKGFVQLILKALAEEPAQLTDAQRHDLSWEAATERFLKAAELDKPFEKKLSRSTSIYM-STSLNLQQTVDDASAYVHHVASGFEISRRMFGAIPGSLKPDEELSKELGL 457          
BLAST of FC922190 vs. ExPASy Swiss-Prot
Match: DGDG1_SOYBN (Digalactosyldiacylglycerol synthase 1, chloroplastic OS=Glycine max GN=DGD1 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.691e-15
Identity = 47/138 (34.06%), Postives = 69/138 (50.00%), Query Frame = -1
Query:  176 NHPSNDFFKQFPNCRTYDDRNGFVXXXXXXXXXXXXXXXXAQRHQLSWESATERFLQVSELD-------QAVVXXXXXXXXKHFASTSLNLKKNMEEASAYVHFLASGFETSRRAFGAIPGSLHPDEELCKELGLVTP 568
            +HPSN+FF+ FPNC TY     FV                 QR+QLSWE+AT+RF++ SELD                      +++  NL + ++   A+ H+  +G E  R   GAIPG+   D++ CK+L L+ P
Sbjct:  637 DHPSNEFFRSFPNCLTYRTSEDFVTKVKEALENEPYPLTPEQRYQLSWEAATQRFMEYSELDGILNKENNGEKSRVDKGKLIAKSASMPNLTELVDGGLAFAHYCLTGNEFLRLCTGAIPGTRDYDKQHCKDLHLLPP 774          
BLAST of FC922190 vs. ExPASy Swiss-Prot
Match: DGDG1_LOTJA (Digalactosyldiacylglycerol synthase 1, chloroplastic OS=Lotus japonicus GN=DGD1 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 2.209e-15
Identity = 47/138 (34.06%), Postives = 69/138 (50.00%), Query Frame = -1
Query:  176 NHPSNDFFKQFPNCRTYDDRNGFVXXXXXXXXXXXXXXXXAQRHQLSWESATERFLQVSELDQAV------VXXXXXXXXKHFASTSL-NLKKNMEEASAYVHFLASGFETSRRAFGAIPGSLHPDEELCKELGLVTP 568
            +HPSN+FF+ FPNC TY     F                  QR+QLSWE+AT+RF++ SELD+ +                   S S+ NL + ++   A+ H+  +G E  R   GA PG+   D++ CK+L L+ P
Sbjct:  640 DHPSNEFFRSFPNCLTYKTPEDFAVKVKEALANEPYPLTPEQRYQLSWEAATQRFMEYSELDKVLNKEKDGAKPSKNNRKIMAKSASMPNLTELVDGGLAFAHYCLTGNEFLRLCTGATPGTRDYDKQHCKDLNLLPP 777          
BLAST of FC922190 vs. ExPASy Swiss-Prot
Match: DGDG1_ARATH (Digalactosyldiacylglycerol synthase 1, chloroplastic OS=Arabidopsis thaliana GN=DGD1 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.700e-13
Identity = 40/131 (30.53%), Postives = 66/131 (50.38%), Query Frame = -1
Query:  176 NHPSNDFFKQFPNCRTYDDRNGFVXXXXXXXXXXXXXXXXAQRHQLSWESATERFLQVSELDQAVVXXXXXXXXKHFASTSLNLKKNMEEASAYVHFLASGFETSRRAFGAIPGSLHPDEELCKELGLVTP 568
            +HPSN+FF+ FPNC TY     FV                 Q + LSWE+AT+RF++ S+LD+ ++           + +  +  + ++   A+ H++ +G +  R   GA P +   D + CK+L LV P
Sbjct:  670 DHPSNEFFRSFPNCLTYKTSEDFVSKVQEAMTKEPLPLTPEQMYNLSWEAATQRFMEYSDLDK-ILNNGEGGRKMRKSRSVPSFNEVVDGGLAFSHYVLTGNDFLRLCTGATPRTKDYDNQHCKDLNLVPP 799          
The following BLAST results are available for this feature:
BLAST of FC922190 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
DGDG2_ARATH3.278e-3556.25Digalactosyldiacylglycerol synthase 2, chloroplast... [more]
DGDG2_SOYBN1.799e-3355.22Digalactosyldiacylglycerol synthase 2, chloroplast... [more]
DGDG2_LOTJA7.557e-3256.25Digalactosyldiacylglycerol synthase 2, chloroplast... [more]
DGDG1_SOYBN1.691e-1534.06Digalactosyldiacylglycerol synthase 1, chloroplast... [more]
DGDG1_LOTJA2.209e-1534.06Digalactosyldiacylglycerol synthase 1, chloroplast... [more]
DGDG1_ARATH2.700e-1330.53Digalactosyldiacylglycerol synthase 1, chloroplast... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAM3CE08RM1 SLH Citrus sinensis cDNA clone KN0AAM3CE08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC922190 ID=FC922190; Name=FC922190; organism=Citrus sinensis; type=EST; length=568bp
TTTTTTTTTTTTTAGAAGAAAAGATTTTTCATTTGCAATTTCTAACTTCA
TTAGAACTTCAAGTACAAAAGAATTCAATGAACCCATACACGCTACACTT
TCTAGGCTTTCAAGTATACAATATTTGAACAAACTACTTTTTAGAACCAA
CATTTTTTCAGCCTTGCTTGCTCATAGGGGTTACCAACCCAAGTTCTTTG
CATAGCTCTTCGTCCGGATGCAAGCTCCCAGGAATTGCACCGAATGCTCT
TCTCGATGTTTCAAATCCAGATGCTAAAAAATGCACATAAGCTGAAGCCT
CCTCCATGTTTTTCTTCAAATTTAATGATGTGGATGCAAAGTGCTTTGAA
GGACTTTTCGATGGTTTCTTCACAACAGCCTGGTCCAGCTCAGAAACTTG
CAGAAACCGTTCTGTAGCAGACTCCCATGACAGTTGATGCCTCTGTGCTT
CAGTTGGTAGAGCAGGCTCTTCAGCAAGTGCTTTCAGTGTGGCTTCCACA
AACCCATTTCTGTCATCATAAGTTCGGCAATTTGGGAATTGCTTGAAGAA
GTCATTTGAGGGGTGGTT
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