FC922177

Overview
NameFC922177
Unique NameFC922177
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length587
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC922177 vs. ExPASy Swiss-Prot
Match: FABH1_CUPWR (3-oxoacyl-[acyl-carrier-protein] synthase 3 A, chloroplastic OS=Cuphea wrightii GN=KAS3A PE=2 SV=2)

HSP 1 Score: 144.436 bits (363), Expect = 3.838e-34
Identity = 70/78 (89.74%), Postives = 73/78 (93.59%), Query Frame = 2
Query:    2 LLLHQANQRIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEAVRSGKVKPGHTIAAAGFGAGLTWGSAILRWG 235
            LLLHQANQRIIDAVA RL+VP ER+ISNLANYGNTSAASIPLALDEAVRSG VKPGH IA AGFGAGLTWGSAI+RWG
Sbjct:  323 LLLHQANQRIIDAVATRLEVPQERIISNLANYGNTSAASIPLALDEAVRSGNVKPGHVIATAGFGAGLTWGSAIIRWG 400          
BLAST of FC922177 vs. ExPASy Swiss-Prot
Match: FABH2_CUPWR (3-oxoacyl-[acyl-carrier-protein] synthase 3 B, chloroplastic OS=Cuphea wrightii GN=KAS3B PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 3.249e-33
Identity = 70/78 (89.74%), Postives = 72/78 (92.31%), Query Frame = 2
Query:    2 LLLHQANQRIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEAVRSGKVKPGHTIAAAGFGAGLTWGSAILRWG 235
            LLLHQANQRIIDAVA RL+VP ERVISNLANYGNTSAASIPLALDEAVR GKVK GH IA AGFGAGLTWGSAI+RWG
Sbjct:  325 LLLHQANQRIIDAVATRLEVPQERVISNLANYGNTSAASIPLALDEAVRGGKVKAGHLIATAGFGAGLTWGSAIVRWG 402          
BLAST of FC922177 vs. ExPASy Swiss-Prot
Match: FABH_SPIOL (3-oxoacyl-[acyl-carrier-protein] synthase III, chloroplastic OS=Spinacia oleracea PE=1 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 7.237e-33
Identity = 68/78 (87.18%), Postives = 74/78 (94.87%), Query Frame = 2
Query:    2 LLLHQANQRIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEAVRSGKVKPGHTIAAAGFGAGLTWGSAILRWG 235
            LLLHQANQRIIDAVA RL+VP ERV+SNLANYGNTSAASIPLALDEAVRSGKVKPG+ IA +GFGAGLTWGS+I+RWG
Sbjct:  328 LLLHQANQRIIDAVATRLEVPSERVLSNLANYGNTSAASIPLALDEAVRSGKVKPGNIIATSGFGAGLTWGSSIIRWG 405          
BLAST of FC922177 vs. ExPASy Swiss-Prot
Match: FABH_ARATH (3-oxoacyl-[acyl-carrier-protein] synthase III, chloroplastic OS=Arabidopsis thaliana GN=At1g62640 PE=2 SV=2)

HSP 1 Score: 140.198 bits (352), Expect = 7.237e-33
Identity = 69/77 (89.61%), Postives = 72/77 (93.51%), Query Frame = 2
Query:    2 LLLHQANQRIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEAVRSGKVKPGHTIAAAGFGAGLTWGSAILRW 232
            LLLHQANQRIID+VA RL  P ERVISNLANYGNTSAASIPLALDEAVRSGKVKPGHTIA +GFGAGLTWGSAI+RW
Sbjct:  327 LLLHQANQRIIDSVATRLHFPPERVISNLANYGNTSAASIPLALDEAVRSGKVKPGHTIATSGFGAGLTWGSAIMRW 403          
BLAST of FC922177 vs. ExPASy Swiss-Prot
Match: FABH_ANAVT (3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=fabH PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 4.855e-29
Identity = 60/78 (76.92%), Postives = 68/78 (87.18%), Query Frame = 2
Query:    2 LLLHQANQRIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEAVRSGKVKPGHTIAAAGFGAGLTWGSAILRWG 235
            LLLHQANQRI+D VA RL++P  +VISNLANYGNTSAASIPLALDEAVR GK+KP   IA +GFGAGLTWG+AI +WG
Sbjct:  252 LLLHQANQRILDTVAQRLNIPAHKVISNLANYGNTSAASIPLALDEAVREGKIKPNDIIATSGFGAGLTWGAAIFQWG 329          
BLAST of FC922177 vs. ExPASy Swiss-Prot
Match: FABH_ANASP (3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Anabaena sp. (strain PCC 7120) GN=fabH PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 4.855e-29
Identity = 60/78 (76.92%), Postives = 68/78 (87.18%), Query Frame = 2
Query:    2 LLLHQANQRIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEAVRSGKVKPGHTIAAAGFGAGLTWGSAILRWG 235
            LLLHQANQRI+D VA RL++P  +VISNLANYGNTSAASIPLALDEAVR GK+KP   IA +GFGAGLTWG+AI +WG
Sbjct:  252 LLLHQANQRILDTVAQRLNIPAHKVISNLANYGNTSAASIPLALDEAVREGKIKPNDIIATSGFGAGLTWGAAIFQWG 329          
BLAST of FC922177 vs. ExPASy Swiss-Prot
Match: FABH_ACAM1 (3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Acaryochloris marina (strain MBIC 11017) GN=fabH PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 3.147e-28
Identity = 59/77 (76.62%), Postives = 68/77 (88.31%), Query Frame = 2
Query:    2 LLLHQANQRIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEAVRSGKVKPGHTIAAAGFGAGLTWGSAILRW 232
            LLLHQANQRI+DAVA RL VP E+VISN+ANYGNTSAA+IPLALD  VR G +KPG TIAA+GFGAGL+WG+AI +W
Sbjct:  254 LLLHQANQRILDAVAKRLKVPAEKVISNIANYGNTSAATIPLALDATVRKGHIKPGDTIAASGFGAGLSWGAAIFQW 330          
BLAST of FC922177 vs. ExPASy Swiss-Prot
Match: FABH_MICAN (3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Microcystis aeruginosa (strain NIES-843) GN=fabH PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 7.010e-28
Identity = 60/78 (76.92%), Postives = 68/78 (87.18%), Query Frame = 2
Query:    2 LLLHQANQRIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEAVRSGKVKPGHTIAAAGFGAGLTWGSAILRWG 235
            L+LHQANQRI+DAV+ RL +P E+VISNL+ YGNTSAASIPLALDEAVRSGKVK G  IA++GFGAGLTWG  I RWG
Sbjct:  255 LVLHQANQRIMDAVSERLKLPPEKVISNLSEYGNTSAASIPLALDEAVRSGKVKKGDIIASSGFGAGLTWGGIIFRWG 332          
BLAST of FC922177 vs. ExPASy Swiss-Prot
Match: FABH_TRIEI (3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Trichodesmium erythraeum (strain IMS101) GN=fabH PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 1.562e-27
Identity = 59/77 (76.62%), Postives = 67/77 (87.01%), Query Frame = 2
Query:    2 LLLHQANQRIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEAVRSGKVKPGHTIAAAGFGAGLTWGSAILRW 232
            LLLHQANQRI+DAVANRL++P E+VISNL NYGNTSAASIPLALDE VR G VK G  IAA+GFGAGL+WG+ I +W
Sbjct:  252 LLLHQANQRILDAVANRLNIPPEKVISNLRNYGNTSAASIPLALDEVVREGLVKSGDIIAASGFGAGLSWGAVIFQW 328          
BLAST of FC922177 vs. ExPASy Swiss-Prot
Match: FABH_SYNP6 (3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=fabH PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 2.664e-27
Identity = 55/78 (70.51%), Postives = 70/78 (89.74%), Query Frame = 2
Query:    2 LLLHQANQRIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEAVRSGKVKPGHTIAAAGFGAGLTWGSAILRWG 235
            LLLHQANQRI+DAVA+RLD+  +RV+SNL NYGNTS+A+IPL LDEAV++GK++ G  IAA+GFGAGL+WG+A+ RWG
Sbjct:  255 LLLHQANQRILDAVADRLDISRDRVLSNLVNYGNTSSATIPLVLDEAVKAGKIQSGDLIAASGFGAGLSWGAALFRWG 332          
The following BLAST results are available for this feature:
BLAST of FC922177 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 390
Match NameE-valueIdentityDescription
FABH1_CUPWR3.838e-3489.743-oxoacyl-[acyl-carrier-protein] synthase 3 A, chl... [more]
FABH2_CUPWR3.249e-3389.743-oxoacyl-[acyl-carrier-protein] synthase 3 B, chl... [more]
FABH_SPIOL7.237e-3387.183-oxoacyl-[acyl-carrier-protein] synthase III, chl... [more]
FABH_ARATH7.237e-3389.613-oxoacyl-[acyl-carrier-protein] synthase III, chl... [more]
FABH_ANAVT4.855e-2976.923-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Ana... [more]
FABH_ANASP4.855e-2976.923-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Ana... [more]
FABH_ACAM13.147e-2876.623-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Aca... [more]
FABH_MICAN7.010e-2876.923-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Mic... [more]
FABH_TRIEI1.562e-2776.623-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Tri... [more]
FABH_SYNP62.664e-2770.513-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Syn... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM1DH05RM1 SLH Citrus sinensis cDNA clone KN0AAM1DH05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC922177 ID=FC922177; Name=FC922177; organism=Citrus sinensis; type=EST; length=587bp
GTTACTTCTTCATCAGGCAAACCAGAGGATCATAGATGCAGTTGCAAACC
GTTTAGATGTCCCAATGGAACGTGTTATATCAAACTTGGCAAATTATGGT
AACACAAGTGCTGCATCCATTCCGCTAGCATTAGATGAAGCAGTTCGAAG
TGGGAAGGTCAAGCCAGGTCATACTATTGCTGCTGCGGGTTTTGGTGCTG
GTCTAACTTGGGGTTCTGCTATTCTTAGATGGGGATGAGAATTTACTATC
AATGACCAGTACCGAAGAGAAAGGAAAATATGTTACAGTGAGATGTGCTT
GAATCCATGCTCCCCGATACATATGTATTGTGGTTAATTGGGGAGGTTGC
AGTCTCATAATCTCCATCAGCTCCATCCTGTTCGTTTGAAGCATCAGCTC
CATCCTGTTTGTTTGAAGTTTGTTACTTCGCAAATGGCGCTCCTAATAAC
TTATTAATTTTTTTTTTCCCAGTCAGTCTTGAGCTTCCCTAATTTCCATT
TTTCAGCGGGTTATGAATAATTGCAGTGTGAACAGCGTCCACAAAATGTG
GTAAAAACTTAAAATATTTACAAGAAAAAAAAAAAAA
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