DR405595

Overview
NameDR405595
Unique NameDR405595
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length768
Libraries
Library NameType
Developing fruit flavedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR405595 vs. ExPASy Swiss-Prot
Match: CP20B_ARATH (Peptidyl-prolyl cis-trans isomerase CYP20-2, chloroplastic OS=Arabidopsis thaliana GN=CYP20-2 PE=1 SV=1)

HSP 1 Score: 240.35 bits (612), Expect = 8.579e-63
Identity = 115/149 (77.18%), Postives = 129/149 (86.58%), Query Frame = 1
Query:  325 VRASAEVA-DLQSKVTNKVYFDVSIGNPVGKLAGRIVIGLYGDDVPQTAENFRALCTGEKGFGSKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVL 768
            V+++AEV  + QSK+T+KVYFD+S+GNPVGKLAGRIVIGLYGDDVPQT ENFRALCTGEKGFG KGSTFHRVI+DFMIQ             S+YGRTFKDENFKLSH+GPGV+SMANAGPNTNGSQFFICT+KT WLD RHVVFGQV+
Sbjct:   74 VQSNAEVVTEPQSKITHKVYFDISVGNPVGKLAGRIVIGLYGDDVPQTVENFRALCTGEKGFGYKGSTFHRVIRDFMIQGGDFEKGNGTGGKSVYGRTFKDENFKLSHVGPGVLSMANAGPNTNGSQFFICTIKTSWLDGRHVVFGQVI 222          
BLAST of DR405595 vs. ExPASy Swiss-Prot
Match: CP20C_ARATH (Peptidyl-prolyl cis-trans isomerase CYP20-3, chloroplastic OS=Arabidopsis thaliana GN=CYP20-3 PE=1 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 2.589e-51
Identity = 98/151 (64.90%), Postives = 116/151 (76.82%), Query Frame = 1
Query:  316 RSLVRASAEVADLQSKVTNKVYFDVSIGNPVGKLAGRIVIGLYGDDVPQTAENFRALCTGEKGFGSKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVL 768
            +S+     EV + Q+KVTNKVYFDV IG   G++AGRIV+GL+G+ VP+T ENFRALCTGEK +G KGS+FHR+IKDFMIQ             SIYG  F+DENF L H GPG++SMANAGPNTNGSQFFICTVKT WLD +HVVFGQV+
Sbjct:   77 KSMAAEEEEVIEPQAKVTNKVYFDVEIG---GEVAGRIVMGLFGEVVPKTVENFRALCTGEKKYGYKGSSFHRIIKDFMIQGGDFTEGNGTGGISIYGAKFEDENFTLKHTGPGILSMANAGPNTNGSQFFICTVKTSWLDNKHVVFGQVI 224          
BLAST of DR405595 vs. ExPASy Swiss-Prot
Match: CYPB_VICFA (Peptidyl-prolyl cis-trans isomerase, chloroplastic OS=Vicia faba PE=1 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 4.570e-48
Identity = 92/146 (63.01%), Postives = 111/146 (76.03%), Query Frame = 1
Query:  331 ASAEVADLQSKVTNKVYFDVSIGNPVGKLAGRIVIGLYGDDVPQTAENFRALCTGEKGFGSKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVL 768
            A  EVA+LQ+KVT+K++FD+ IG   G+ AGRIVIGL+GD VP+T ENF+ L TG KG+G +GS FHR+I +FMIQ             SIYG  F+DE+F L H+GPGV+SMANAGPNTNGSQFFICTV TPWLD RHVVFG V+
Sbjct:   69 AQGEVAELQAKVTSKIFFDIEIG---GESAGRIVIGLFGDAVPKTVENFKTLSTGAKGYGYQGSFFHRIIPNFMIQGGDFTEGNGTGGVSIYGSKFEDESFDLKHVGPGVLSMANAGPNTNGSQFFICTVPTPWLDNRHVVFGHVI 211          
BLAST of DR405595 vs. ExPASy Swiss-Prot
Match: PPIB_ORPSP (Peptidyl-prolyl cis-trans isomerase B OS=Orpinomyces sp. (strain PC-2) GN=CYPB PE=1 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.521e-43
Identity = 90/141 (63.83%), Postives = 101/141 (71.63%), Query Frame = 1
Query:  346 ADLQSKVTNKVYFDVSIGNPVGKLAGRIVIGLYGDDVPQTAENFRALCTGEKGFGSKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVL 768
            A    KVTNKVYFD+  G+   K  GRIV+GLYG+ VP+T ENFRAL TGEKG+G K S FHRVIKDFMIQ             SIYG  F DENFKL H GPG++SMANAG +TNGSQFFI TV T WLD RHVVFG+V+
Sbjct:   22 ASTNPKVTNKVYFDIKQGD---KDLGRIVLGLYGEVVPKTVENFRALATGEKGYGYKNSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGERFADENFKLRHTGPGILSMANAGRDTNGSQFFITTVTTSWLDGRHVVFGKVI 159          
BLAST of DR405595 vs. ExPASy Swiss-Prot
Match: PPIB_EMENI (Peptidyl-prolyl cis-trans isomerase B OS=Emericella nidulans GN=cpr2 PE=3 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 4.426e-43
Identity = 88/136 (64.71%), Postives = 100/136 (73.53%), Query Frame = 1
Query:  361 KVTNKVYFDVSIGNPVGKLAGRIVIGLYGDDVPQTAENFRALCTGEKGFGSKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVL 768
            K+TNKVYFD+  G+   +  GRIV+GLYG  VP+TAENFRAL TGEKGFG +GS FHRVIKDFMIQ             SIYG  FKDENFKL H   G++SMANAG +TNGSQFFI T  TPWLD +HVVFG+VL
Sbjct:   31 KITNKVYFDIQHGD---ESLGRIVLGLYGKTVPETAENFRALATGEKGFGYEGSNFHRVIKDFMIQGGDFTRGDGTGGKSIYGAKFKDENFKLRHTKTGLLSMANAGKDTNGSQFFITTAVTPWLDGKHVVFGEVL 163          
BLAST of DR405595 vs. ExPASy Swiss-Prot
Match: PPIB_ASPNG (Peptidyl-prolyl cis-trans isomerase B OS=Aspergillus niger GN=cypB PE=3 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 4.426e-43
Identity = 88/136 (64.71%), Postives = 101/136 (74.26%), Query Frame = 1
Query:  361 KVTNKVYFDVSIGNPVGKLAGRIVIGLYGDDVPQTAENFRALCTGEKGFGSKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVL 768
            K+T+KV+FD+  G+   K  GR+V+GLYG  VP+TAENFRAL TGEKGFG +GSTFHRVIKDFMIQ             SIYG  F DENFKL H   G++SMANAG +TNGSQFFI TV TPWLD RHVVFG+VL
Sbjct:   32 KITSKVFFDIEHGD---KPLGRVVLGLYGKTVPKTAENFRALATGEKGFGYEGSTFHRVIKDFMIQGGDFTRGDGTGGKSIYGEKFADENFKLRHTRKGLLSMANAGKDTNGSQFFITTVPTPWLDGRHVVFGEVL 164          
BLAST of DR405595 vs. ExPASy Swiss-Prot
Match: PPIF_HUMAN (Peptidyl-prolyl cis-trans isomerase, mitochondrial OS=Homo sapiens GN=PPIF PE=1 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 5.781e-43
Identity = 90/157 (57.32%), Postives = 101/157 (64.33%), Query Frame = 1
Query:  295 PTRKMGTRSLVRASAEVADLQSKVTNKVYFDVSIGNPVGKLAGRIVIGLYGDDVPQTAENFRALCTGEKGFGSKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 765
            P R    R+  + S + +   S     VY DV      GK  GR+V+ L  D VP+TAENFRALCTGEKGFG KGSTFHRVI  FM Q             SIYG  F DENF L H+GPGV+SMANAGPNTNGSQFFICT+KT WLD +HVVFG V
Sbjct:   21 PLRLPAARACSKGSGDPSSSSSSGNPLVYLDVDAN---GKPLGRVVLELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYGSRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHV 174          
BLAST of DR405595 vs. ExPASy Swiss-Prot
Match: PPIB_ASPFU (Peptidyl-prolyl cis-trans isomerase B OS=Aspergillus fumigatus GN=cpr2 PE=3 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 9.861e-43
Identity = 91/150 (60.67%), Postives = 104/150 (69.33%), Query Frame = 1
Query:  319 SLVRASAEVADLQSKVTNKVYFDVSIGNPVGKLAGRIVIGLYGDDVPQTAENFRALCTGEKGFGSKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVL 768
            +LV A         K+T+KV+FD+  G+   K  GRIV+GLYG  VP+TAENFRAL TGEKGFG +GSTFHRVIK FMIQ             SIYG  F DENFKL H   G++SMANAG +TNGSQFFI TV TPWLD RHVVFG+VL
Sbjct:   19 ALVHAEETKEPRGPKITSKVFFDIEHGD---KPLGRIVLGLYGKTVPKTAENFRALATGEKGFGYEGSTFHRVIKSFMIQGGDFTRGDGTGGKSIYGEKFADENFKLRHTRKGLLSMANAGKDTNGSQFFITTVPTPWLDGRHVVFGEVL 165          
BLAST of DR405595 vs. ExPASy Swiss-Prot
Match: PPIB_CRYNE (Peptidyl-prolyl cis-trans isomerase B OS=Cryptococcus neoformans GN=CPR2 PE=3 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.288e-42
Identity = 89/141 (63.12%), Postives = 101/141 (71.63%), Query Frame = 1
Query:  364 VTNKVYFDVSIGNPVGKLAGRIVIGLYGDDVPQTAENFRALCTGEK------GFGSKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVL 768
            +TNKVYFD+  G   GK  GRIV+GLYG  VP+TAENFRAL TG+       G+G +GS+FHR+IK+FMIQ             SIYG  F DENFKL H GPGV+SMANAG +TNGSQFFICTVKT WLD RHVVFG VL
Sbjct:   43 ITNKVYFDIEHG---GKPLGRIVMGLYGKTVPKTAENFRALATGKNSDGEDLGYGYEGSSFHRIIKNFMIQGGDFTKGDGTGGKSIYGSKFPDENFKLKHTGPGVLSMANAGRDTNGSQFFICTVKTAWLDNRHVVFGHVL 180          
BLAST of DR405595 vs. ExPASy Swiss-Prot
Match: PPIB_ASPOR (Peptidyl-prolyl cis-trans isomerase B OS=Aspergillus oryzae GN=cpr2 PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 2.869e-42
Identity = 90/149 (60.40%), Postives = 105/149 (70.47%), Query Frame = 1
Query:  325 VRASAEVADLQ-SKVTNKVYFDVSIGNPVGKLAGRIVIGLYGDDVPQTAENFRALCTGEKGFGSKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVL 768
            +R++ E+   Q S     VYFD+  GN   K  GR+V+GLYG  VP+TAENFRAL TGEKGFG +GSTFHRVIK+FMIQ             SIYG  FKDENFK+ H   G++SMANAG +TNGSQFFI TV TPWLD RHVVFG+VL
Sbjct:    4 LRSAEEITSQQYSSGLATVYFDIEHGN---KPLGRVVLGLYGKTVPKTAENFRALATGEKGFGYEGSTFHRVIKEFMIQGGDFTRGDGTGGKSIYGEKFKDENFKIRHTKKGLLSMANAGKDTNGSQFFITTVATPWLDGRHVVFGEVL 149          
The following BLAST results are available for this feature:
BLAST of DR405595 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 225
Match NameE-valueIdentityDescription
CP20B_ARATH8.579e-6377.18Peptidyl-prolyl cis-trans isomerase CYP20-2, chlor... [more]
CP20C_ARATH2.589e-5164.90Peptidyl-prolyl cis-trans isomerase CYP20-3, chlor... [more]
CYPB_VICFA4.570e-4863.01Peptidyl-prolyl cis-trans isomerase, chloroplastic... [more]
PPIB_ORPSP1.521e-4363.83Peptidyl-prolyl cis-trans isomerase B OS=Orpinomyc... [more]
PPIB_EMENI4.426e-4364.71Peptidyl-prolyl cis-trans isomerase B OS=Emericell... [more]
PPIB_ASPNG4.426e-4364.71Peptidyl-prolyl cis-trans isomerase B OS=Aspergill... [more]
PPIF_HUMAN5.781e-4357.32Peptidyl-prolyl cis-trans isomerase, mitochondrial... [more]
PPIB_ASPFU9.861e-4360.67Peptidyl-prolyl cis-trans isomerase B OS=Aspergill... [more]
PPIB_CRYNE1.288e-4263.12Peptidyl-prolyl cis-trans isomerase B OS=Cryptococ... [more]
PPIB_ASPOR2.869e-4260.40Peptidyl-prolyl cis-trans isomerase B OS=Aspergill... [more]

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Properties
Property NameValue
Genbank descriptionCSAD-PNP1242P03 Developing fruit flavedo at 165 DAFB Citrus sinensis cDNA clone CSAD-PNP1242P03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR405595 ID=DR405595; Name=DR405595; organism=Citrus sinensis; type=EST; length=768bp
GGGGACACTTCTTAGCTCTTATCTATCGGTAGTAACAATCTTTTATCTGA
ATCTCTCCACACACCGACTCTGAGGCACTTGTCCATTCCATCAATGGCGG
CAGCGGCTTCATTCGCAGCCCAGATAAATGTAGGCTGGGTCTCAGGCCCA
CTTCAACTGAACAAAGCTCTCAGTCCCTCGCGTAATGCAATCGAGATACC
CAGAAAATCTTCTTCATTCCTATCAAATGCTTCATCATCCTGCTCCAGCT
TCTTCTCCCGTCCGTTGACTCCCGTTCCCCCTCTCACTCATTTTCCCACC
AGGAAAATGGGTACGCGTAGCCTTGTTCGGGCCAGTGCTGAGGTAGCTGA
TTTACAATCGAAAGTTACCAATAAAGTTTATTTCGACGTGAGCATTGGGA
ATCCAGTAGGAAAGCTTGCTGGAAGAATCGTGATTGGATTGTACGGTGAT
GATGTGCCCCAAACGGCAGAGAACTTCCGTGCTTTATGCACAGGAGAGAA
GGGCTTTGGTTCCAAAGGTTCCACATTCCATCGTGTTATCAAAGATTTCA
TGATCCAAGGAGGAGACTTTGATAAAGGCAATGGAACTGGAGGTAAAAGT
ATATACGGCCGTACATTCAAAGATGAGAACTTCAAATTGTCGCATATTGG
ACCAGGAGTAGTTAGTATGGCAAATGCAGGTCCCAACACTAATGGCAGCC
AATTTTTCATTTGTACGGTCAAGACACCATGGCTAGATCAGAGGCATGTT
GTCTTTGGGCAAGTTTTG
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