CN188876
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188876 vs. ExPASy Swiss-Prot
Match: THI4_CITSI (Thiazole biosynthetic enzyme, chloroplastic OS=Citrus sinensis GN=THI1 PE=2 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 1.523e-29 Identity = 64/65 (98.46%), Postives = 64/65 (98.46%), Query Frame = -1 Query: 304 REVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLGQPNALDGTYVGGVPPELIL 498 REVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLGQPNALDGTYVGGV PELIL Sbjct: 281 REVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLGQPNALDGTYVGGVHPELIL 345
BLAST of CN188876 vs. ExPASy Swiss-Prot
Match: THI4_ALNGL (Thiazole biosynthetic enzyme, chloroplastic OS=Alnus glutinosa GN=THI4 PE=2 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 1.092e-27 Identity = 59/65 (90.77%), Postives = 63/65 (96.92%), Query Frame = -1 Query: 304 REVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLGQPNALDGTYVGGVPPELIL 498 RE+VPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALK+LG PNALDG+YVGG+ PELIL Sbjct: 277 REIVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGLPNALDGSYVGGIHPELIL 341
BLAST of CN188876 vs. ExPASy Swiss-Prot
Match: THI4_ARATH (Thiazole biosynthetic enzyme, chloroplastic OS=Arabidopsis thaliana GN=THI1 PE=1 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 8.650e-25 Identity = 55/65 (84.62%), Postives = 59/65 (90.77%), Query Frame = -1 Query: 304 REVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLGQPNALDGTYVGGVPPELIL 498 REVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKA LALK+LG PNA+DGT VG + PEL+L Sbjct: 274 REVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAGQLALKALGLPNAIDGTLVGNLSPELVL 338
BLAST of CN188876 vs. ExPASy Swiss-Prot
Match: THI41_MAIZE (Thiazole biosynthetic enzyme 1-1, chloroplastic OS=Zea mays GN=THI1-1 PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 4.747e-23 Identity = 53/65 (81.54%), Postives = 59/65 (90.77%), Query Frame = -1 Query: 304 REVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLGQPNALDGTYVGGVPPELIL 498 REVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALK+LG+PNA+DGT + EL++ Sbjct: 280 REVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGRPNAVDGTMSPPLREELMI 344
BLAST of CN188876 vs. ExPASy Swiss-Prot
Match: THI42_MAIZE (Thiazole biosynthetic enzyme 1-2, chloroplastic OS=Zea mays GN=THI1-2 PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.057e-22 Identity = 51/54 (94.44%), Postives = 54/54 (100.00%), Query Frame = -1 Query: 337 REVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLGQPNALDGT 498 REVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALK+LG+PNA+DGT Sbjct: 277 REVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGRPNAVDGT 330
BLAST of CN188876 vs. ExPASy Swiss-Prot
Match: THI4_UROFA (Thiazole biosynthetic enzyme, mitochondrial OS=Uromyces fabae GN=THI2 PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 3.770e-12 Identity = 32/57 (56.14%), Postives = 46/57 (80.70%), Query Frame = -1 Query: 328 REVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLGQPNALDGTYVG 498 RE++PG+IV GME++E DG+ RMGPTFGAM++SG++AA +AL+SL + +G VG Sbjct: 279 REILPGLIVGGMELSEFDGSARMGPTFGAMLLSGKRAAEVALQSLDRVKIEEGEVVG 335
BLAST of CN188876 vs. ExPASy Swiss-Prot
Match: THI4_FUSSH (Thiazole biosynthetic enzyme, mitochondrial OS=Fusarium solani subsp. phaseoli GN=STI35 PE=2 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 7.109e-11 Identity = 31/43 (72.09%), Postives = 38/43 (88.37%), Query Frame = -1 Query: 370 REVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALK 498 RE+VPG+IV GME++E+DGA RMGPTFGAM++SG KAA ALK Sbjct: 271 REIVPGLIVGGMELSEVDGANRMGPTFGAMVLSGLKAAEEALK 313 The following BLAST results are available for this feature:
BLAST of CN188876 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN188876 ID=CN188876; Name=CN188876; organism=Citrus sinensis; type=EST; length=498bpback to top |