EY679039

Overview
NameEY679039
Unique NameEY679039
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length615
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY679039 vs. ExPASy Swiss-Prot
Match: 21KD_DAUCA (21 kDa protein OS=Daucus carota PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 4.231e-34
Identity = 72/161 (44.72%), Postives = 109/161 (67.70%), Query Frame = 1
Query:    1 TSCSSTTYPTLCYKSLARHASLIQTSPKLLAHASLNVTLAMAKSTSAVMLKISKSLGMKPREAEAMQDCLEELSDSVDELRKSIGEMGLI---KASNFELTMNDIQTWVSAALTDETTCSDGFEKNTVNGKV---VRGQIVKIAHMTSNALALINSYASLH 465
            TSC+ TTYP +C +SL+ +A  IQ +P+ LA  +L V+L   +     M +++K  G+K R+  A+ DCLEE+ DS+D + +S  EM  +   K ++F   M++++TWVSAALTDETTC DGF    ++GK+   VR Q+V +A +TSNALAL+N++A+ H
Sbjct:   31 TSCTLTTYPAVCEQSLSAYAKTIQNNPQELASTALQVSLTRTQQAQTFMKRLNKFKGLKARQYAAIHDCLEEVEDSLDRVSRSCDEMKNLSHAKGNDFTFRMSNVETWVSAALTDETTCMDGFAGKGMDGKIKESVRAQVVAVARVTSNALALVNNFAAKH 191          
BLAST of EY679039 vs. ExPASy Swiss-Prot
Match: PME2_ARATH (Pectinesterase 2 OS=Arabidopsis thaliana GN=PME2 PE=2 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 1.012e-19
Identity = 58/154 (37.66%), Postives = 90/154 (58.44%), Query Frame = 1
Query:    7 CSSTTYPTLCYKSLARHASLIQTSPKLLAHASLNVTLAMAKSTS-AVMLKISKSLGMKPREAEAMQDCLEELSDSVDELRKSIGEMGLI-KASNFELTMNDIQTWVSAALTDETTCSDGFEKNTVNGKV----VRGQIVKIAHMTSNALALINS 450
            CSST YP LC+ ++A       TS K +  ASLN+T    K    AV   I+K  G+ PRE  A+ DCLE + +++DEL  ++ ++    K  +     +D++T +S+A+T++ TC DGF  +  + KV    ++GQ V + HM SNALA+I +
Sbjct:   66 CSSTLYPELCFSAVAATGGKELTSQKEVIEASLNLTTKAVKHNYFAVKKLIAKRKGLTPREVTALHDCLETIDETLDELHVAVEDLHQYPKQKSLRKHADDLKTLISSAITNQGTCLDGFSYDDADRKVRKALLKGQ-VHVEHMCSNALAMIKN 218          
BLAST of EY679039 vs. ExPASy Swiss-Prot
Match: PME3_ARATH (Pectinesterase/pectinesterase inhibitor 3 OS=Arabidopsis thaliana GN=PME3 PE=2 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 8.565e-19
Identity = 54/156 (34.62%), Postives = 90/156 (57.69%), Query Frame = 1
Query:    1 TSCSSTTYPTLCYKSLARHASLIQTSPKLLAHASLNVTLAMAKSTSAVMLK-ISKSLGMKPREAEAMQDCLEELSDSVDELRKSIGEMGLIKA-SNFELTMNDIQTWVSAALTDETTCSDGFEKNTVNGKV----VRGQIVKIAHMTSNALALINS 450
            +SCSST YP LC  ++     +  TS K +  AS+N+T+   +     + K I K  G+ PRE  A+ DCLE + +++DEL +++ ++ L            D++T +S+A+T++ TC DGF  +  + +V    ++GQI  + HM SNALA+I +
Sbjct:   61 SSCSSTRYPELCISAVVTAGGVELTSQKDVIEASVNLTITAVEHNYFTVKKLIKKRKGLTPREKTALHDCLETIDETLDELHETVEDLHLYPTKKTLREHAGDLKTLISSAITNQETCLDGFSHDDADKQVRKALLKGQI-HVEHMCSNALAMIKN 215          
BLAST of EY679039 vs. ExPASy Swiss-Prot
Match: PME3_CITSI (Pectinesterase 3 OS=Citrus sinensis PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.367e-16
Identity = 55/157 (35.03%), Postives = 87/157 (55.41%), Query Frame = 1
Query:    1 TSCSSTTYPTLCYKSLAR--HASLIQTSPKLLAHASLNVTLAMAKSTSAVMLKISKSLGMKPREAEAMQDCLEELSDSVDELRKSIGEM-GLIKASNFELTMNDIQTWVSAALTDETTCSDGFEKNTVNGKVVRGQI----VKIAHMTSNALALINS 450
            +SCSST YP LC+ ++A    AS   TS K +   SLN+T    +     + K+ K   +  RE  A+ DCLE + +++DEL K++ ++       +     +D++T +SAA+T++ TC DGF  +  N K VR  +    V +  M SNALA+I +
Sbjct:   71 SSCSSTRYPDLCFSAIAAVPEASKKVTSQKDVIEMSLNITTTAVEHNYFGIQKLLKRTNLTKREKVALHDCLETIDETLDELHKAVEDLEEYPNKKSLSQHADDLKTLMSAAMTNQGTCLDGFSHDDAN-KHVRDALSDGQVHVEKMCSNALAMIKN 226          
BLAST of EY679039 vs. ExPASy Swiss-Prot
Match: PME1_CITSI (Pectinesterase 1 OS=Citrus sinensis GN=PECS-1.1 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.367e-16
Identity = 55/157 (35.03%), Postives = 87/157 (55.41%), Query Frame = 1
Query:    1 TSCSSTTYPTLCYKSLAR--HASLIQTSPKLLAHASLNVTLAMAKSTSAVMLKISKSLGMKPREAEAMQDCLEELSDSVDELRKSIGEM-GLIKASNFELTMNDIQTWVSAALTDETTCSDGFEKNTVNGKVVRGQI----VKIAHMTSNALALINS 450
            +SCSST YP LC+ ++A    AS   TS K +   SLN+T    +     + K+ K   +  RE  A+ DCLE + +++DEL K++ ++       +     +D++T +SAA+T++ TC DGF  +  N K VR  +    V +  M SNALA+I +
Sbjct:   71 SSCSSTRYPDLCFSAIAAVPEASKKVTSQKDVIEMSLNITTTAVEHNYFGIQKLLKRTNLTKREKVALHDCLETIDETLDELHKAVEDLEEYPNKKSLSQHADDLKTLMSAAMTNQGTCLDGFSHDDAN-KHVRDALSDGQVHVEKMCSNALAMIKN 226          
BLAST of EY679039 vs. ExPASy Swiss-Prot
Match: PMEU1_SOLLC (Pectinesterase/pectinesterase inhibitor U1 OS=Solanum lycopersicum GN=PMEU1 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 3.979e-16
Identity = 52/156 (33.33%), Postives = 92/156 (58.97%), Query Frame = 1
Query:    1 TSCSSTTYPTLCYKSLARHASLIQ--TSPKLLAHASLNVTL-AMAKSTSAVMLKISKSLGMKPREAEAMQDCLEELSDSVDELRKSIGEMGLI-KASNFELTMNDIQTWVSAALTDETTCSDGFEKNTVNGKV----VRGQIVKIAHMTSNALALI 444
            ++CS+T +P LCY ++   +   +  TS K +   SLN+T+ A+ ++  AV   I    G+ PRE  A+ DCLE + +++DEL  ++ ++ L     + +  + D++T +S+A+T++ TC DGF  +  + KV    ++GQ   +  M SNALA+I
Sbjct:   68 SACSNTLHPELCYSAIVNVSDFSKKVTSQKDVIELSLNITVKAVRRNYYAVKELIKTRKGLTPREKVALHDCLETMDETLDELHTAVEDLELYPNKKSLKEHVEDLKTLISSAITNQETCLDGFSHDEADKKVRKVLLKGQ-KHVEKMCSNALAMI 222          
BLAST of EY679039 vs. ExPASy Swiss-Prot
Match: PME61_ARATH (Probable pectinesterase/pectinesterase inhibitor 61 OS=Arabidopsis thaliana GN=PME61 PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.851e-14
Identity = 46/150 (30.67%), Postives = 74/150 (49.33%), Query Frame = 1
Query:    4 SCSSTTYPTLCYKSLARHASLIQTSPKLLAHASLNVTLAMAKSTSAVMLKISKSLGMKPREAEAMQDCLEELSDSVDELRKSIGEMGLIKASNFELTMNDIQTWVSAALTDETTCSDGFEKNTVNGKVVRGQIV----KIAHMTSNALAL 441
            +CS + YP LC  +L      +      L H S N TL            I+ +  M PR   A   CLE L DSVD L +++  + ++       + +D+ TW+S+A+T+  TC+DGF++    G  V+ Q++     ++ M SN LA+
Sbjct:   78 TCSKSLYPNLCIDTLLDFPGSLTADENELIHISFNATLQKFSKALYTSSTITYTQ-MPPRVRSAYDSCLELLDDSVDALTRALSSVVVVSGDE---SHSDVMTWLSSAMTNHDTCTDGFDEIEGQGGEVKDQVIGAVKDLSEMVSNCLAI 223          
BLAST of EY679039 vs. ExPASy Swiss-Prot
Match: PME3_PHAVU (Pectinesterase 3 OS=Phaseolus vulgaris GN=MPE3 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 3.854e-11
Identity = 46/166 (27.71%), Postives = 77/166 (46.39%), Query Frame = 1
Query:    7 CSSTTYPTLCYKSLARHASLIQTSPKLLAHASLNVTLAMAKSTSAVMLKISKSLGMKPREAEAMQDCLEELSDSVDELRKSIGEMGLIKAS-NFELTMNDIQTWVSAALTDETTCSDGFEKNTVNGKVVRGQIVKI-------AHMTSNALALINSYASLHA*LET 480
            C +T YP+ C+ S++       T P+LL   SL V +      S+   K+  +     R  +A+  C     D++D L  SI  +G +        ++++++TW+SAALTD+ TC D      +N    RG + +I           SN+LA++     L +  ET
Sbjct:   81 CDTTRYPSSCFSSISSLPESNTTDPELLFKLSLRVAI---DELSSFPSKLRANAEQDARLQKAIDVCSSVFGDALDRLNDSISALGTVAGRIASSASVSNVETWLSAALTDQDTCLDAV--GELNSTAARGALQEIETAMRNSTEFASNSLAIVTKILGLLSRFET 241          
BLAST of EY679039 vs. ExPASy Swiss-Prot
Match: PME34_ARATH (Probable pectinesterase/pectinesterase inhibitor 34 OS=Arabidopsis thaliana GN=PME34 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.033e-11
Identity = 47/152 (30.92%), Postives = 74/152 (48.68%), Query Frame = 1
Query:    4 SCSSTTYPTLCYKSLARH-ASLIQTSPKLLAHASLNVTLAMAKSTSAVMLKISKSLGMKPREAEAMQDCLEELSDSVDELRKSIGEMGLIKASNFELTMNDIQTWVSAALTDETTCSDGFEKNTVNG--KVVRGQIVKIAHMTSNALALINS 450
            +C  T +P LC  SL     SL  +S K L H ++N+TL            +S  + M PR   A   C+E L DSVD L +++  +    A        D+ TW+SAALT+  TC++GF+     G    +   +  ++ + SN LA+ ++
Sbjct:   90 ACELTRFPELCVDSLMDFPGSLAASSSKDLIHVTVNMTLHHFSHALYSSASLS-FVDMPPRARSAYDSCVELLDDSVDALSRALSSVVSSSAKP-----QDVTTWLSAALTNHDTCTEGFDGVDDGGVKDHMTAALQNLSELVSNCLAIFSA 235          
The following BLAST results are available for this feature:
BLAST of EY679039 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
21KD_DAUCA4.231e-3444.7221 kDa protein OS=Daucus carota PE=2 SV=1[more]
PME2_ARATH1.012e-1937.66Pectinesterase 2 OS=Arabidopsis thaliana GN=PME2 P... [more]
PME3_ARATH8.565e-1934.62Pectinesterase/pectinesterase inhibitor 3 OS=Arabi... [more]
PME3_CITSI1.367e-1635.03Pectinesterase 3 OS=Citrus sinensis PE=1 SV=1[more]
PME1_CITSI1.367e-1635.03Pectinesterase 1 OS=Citrus sinensis GN=PECS-1.1 PE... [more]
PMEU1_SOLLC3.979e-1633.33Pectinesterase/pectinesterase inhibitor U1 OS=Sola... [more]
PME61_ARATH2.851e-1430.67Probable pectinesterase/pectinesterase inhibitor 6... [more]
PME3_PHAVU3.854e-1127.71Pectinesterase 3 OS=Phaseolus vulgaris GN=MPE3 PE=... [more]
PME34_ARATH5.033e-1130.92Probable pectinesterase/pectinesterase inhibitor 3... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-401-054-D06-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679039 ID=EY679039; Name=EY679039; organism=Citrus sinensis; type=EST; length=615bp
ACATCTTGCAGTTCAACAACCTATCCAACACTTTGCTATAAATCCCTTGC
TAGACATGCAAGCTTAATCCAAACAAGCCCTAAGCTCCTCGCCCATGCAT
CCCTCAACGTGACCCTTGCAATGGCTAAATCAACGTCAGCCGTCATGTTA
AAGATATCGAAAAGCCTTGGAATGAAGCCTAGAGAGGCGGAAGCCATGCA
AGATTGTTTGGAGGAGCTGAGTGATTCAGTTGATGAACTCAGAAAGTCTA
TTGGCGAAATGGGTCTGATCAAAGCTTCTAACTTTGAACTCACAATGAAT
GATATACAGACTTGGGTTAGTGCTGCTTTGACCGATGAGACTACTTGCAG
CGATGGATTTGAAAAAAATACGGTTAATGGGAAAGTCGTGAGAGGCCAGA
TTGTGAAGATTGCCCATATGACTAGCAATGCCTTGGCTTTGATCAATAGT
TATGCTTCGCTTCATGCTTAATTAGAAACTGTGATGATGATGAGCTTCAG
CATTAATGTTAACTCACATATGTGTATATTGTTAATCTTTTGTCCGGGAA
ATAAAATTCTATTTAATATTTACAAAAACATAAAAAATAATAAAATATAA
AAAAAAAAAAAAATT
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