FC871377

Overview
NameFC871377
Unique NameFC871377
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length703
Libraries
Library NameType
AbsCFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC871377 vs. ExPASy Swiss-Prot
Match: METC_ARATH (Cystathionine beta-lyase, chloroplastic OS=Arabidopsis thaliana GN=At3g57050 PE=1 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 9.588e-63
Identity = 133/231 (57.58%), Postives = 160/231 (69.26%), Query Frame = 2
Query:   26 HRAFISNTYTELTNSGSSIPLNSPTSFGFSK------RRIIFAKELKLNCSIDREKEIDVSTSALVDDVAXXXXXXXXXXXXPGVSTLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGAYDYTRSGNPTRDALESXXXXXXXXXXXXCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQI 700
            H +F+ + + +L++ G  I  NSPTS   SK      ++I      KLNC +  EK +D  T + V++                VSTLL+N  N+FDP+ A+STPLYQTATFKQPSA ENG YDYTRSGNPTRDALES            CFTSGMAAL+AVTHL+  GEEIVAGDD+YGG+DRLLS+V P++GVVVKRVNT  LDEVA+AIGP TKLVW+ESPTNPRQQI
Sbjct:    8 HSSFVPS-FADLSDRGL-ISKNSPTSVSISKVPTWEKKQISNRNSFKLNCVM--EKSVDGQTHSTVNNTTDSLNTMNIKEEA-SVSTLLVNLDNKFDPFDAMSTPLYQTATFKQPSAIENGPYDYTRSGNPTRDALESLLAKLDKADRAFCFTSGMAALSAVTHLIKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNTTKLDEVAAAIGPQTKLVWLESPTNPRQQI 233          
BLAST of FC871377 vs. ExPASy Swiss-Prot
Match: CBL_SCHPO (Cystathionine beta-lyase OS=Schizosaccharomyces pombe GN=str3 PE=2 SV=4)

HSP 1 Score: 117.857 bits (294), Expect = 5.495e-26
Identity = 65/148 (43.92%), Postives = 83/148 (56.08%), Query Frame = 2
Query:  260 VSTLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGAYDYTRSGNPTRDALESXXXXXXXXXXXXCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQIC 703
            V T L++     D Y A S P+YQ+ATFKQP     G +DYTRSGNPTR  L+               ++GM+AL  +     +   +VAG DLYGG+DRLLS    + G  V  V+T DL    +A+ P T LV +ESPTNPR  IC
Sbjct:    9 VDTELVHVEGNEDQYHASSVPIYQSATFKQPCLEHMGKFDYTRSGNPTRSVLQVHLAKLMKAKHAFVTSNGMSALDMILRCCKSNSHVVAGHDLYGGSDRLLSFNQRQYGFKVDNVDTSDLAAFEAALRPDTNLVLIESPTNPRISIC 156          
BLAST of FC871377 vs. ExPASy Swiss-Prot
Match: MCCB_BACSU (Cystathionine gamma-lyase OS=Bacillus subtilis GN=mccB PE=1 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.088e-25
Identity = 56/132 (42.42%), Postives = 85/132 (64.39%), Query Frame = 2
Query:  305 GALSTPLYQTATFKQPSATENGAYDYTRSGNPTRDALESXXXXXXXXXXXXCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQI 700
            GA+S P+YQ +T+KQP A ++  Y+Y+R+ NPTR ALE+             F+SGMAA+ AV  L  +G+ +V  DD+YGGT R++++V  + G+    V+T   +EV  AI P TK +++E+PTNP  +I
Sbjct:   19 GAVSVPIYQVSTYKQPKAGQHTGYEYSRTANPTRTALEALVTELESGEAGYAFSSGMAAITAVMMLFNSGDHVVLTDDVYGGTYRVMTKVLNRLGIESTFVDTSSREEVEKAIRPNTKAIYIETPTNPLLKI 150          
BLAST of FC871377 vs. ExPASy Swiss-Prot
Match: METB_HELPJ (Cystathionine gamma-synthase OS=Helicobacter pylori J99 GN=metB PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.015e-24
Identity = 56/138 (40.58%), Postives = 85/138 (61.59%), Query Frame = 2
Query:  287 NEFDPYGALSTPLYQTATFKQPSATENGAYDYTRSGNPTRDALESXXXXXXXXXXXXCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQI 700
            NE    GA+S P+YQT+T++Q +   +  Y+Y+RSGNPTR ALE              F SG+A + AV  LL +G+ ++ GDD+YGG  RL ++V  K G+    ++T DL ++  AI P TK +++E+P+NP  +I
Sbjct:   13 NEDATTGAVSVPIYQTSTYRQDAIGRHKGYEYSRSGNPTRFALEELIADLEGGVKGFAFASGLAGIHAVFSLLQSGDHVLLGDDVYGGNFRLFNKVLVKNGLSCTIIDTSDLSQIKKAIKPNTKALYLETPSNPLLKI 150          
BLAST of FC871377 vs. ExPASy Swiss-Prot
Match: METB_HELPY (Cystathionine gamma-synthase OS=Helicobacter pylori GN=metB PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.938e-24
Identity = 54/132 (40.91%), Postives = 84/132 (63.64%), Query Frame = 2
Query:  305 GALSTPLYQTATFKQPSATENGAYDYTRSGNPTRDALESXXXXXXXXXXXXCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQI 700
            GA+S P+YQT+T++Q +   +  Y+Y+RSGNPTR ALE              F SG+A + AV  LL +G+ ++ GDD+YGGT RL ++V  K G+    ++T D+ ++  AI P TK +++E+P+NP  +I
Sbjct:   19 GAVSVPIYQTSTYRQDAIGRHKGYEYSRSGNPTRFALEELIADLEGGVKGFAFASGLAGIHAVFSLLQSGDHVLLGDDVYGGTFRLFNQVLVKNGLSCTIIDTSDISQIKKAIKPNTKALYLETPSNPLLKI 150          
BLAST of FC871377 vs. ExPASy Swiss-Prot
Match: METC_LACLM (Cystathionine beta-lyase OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=metC PE=1 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.717e-24
Identity = 53/128 (41.41%), Postives = 79/128 (61.72%), Query Frame = 2
Query:  305 GALSTPLYQTATFKQPSATENGAYDYTRSGNPTRDALESXXXXXXXXXXXXCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNP 688
            GA+S P+YQT+T+KQ    +   Y+Y+RSGNPTR ALE              F+SG+A + AV  L   G+ I+  DD+YGGT RL+ +V  KTG++   V+  +LD++ +A    TK ++ E+P+NP
Sbjct:   20 GAVSVPIYQTSTYKQNGLGQPKEYEYSRSGNPTRHALEELIADLEGGVQGFAFSSGLAGIHAVLSLFSAGDHIILADDVYGGTFRLMDKVLTKTGIIYDLVDLSNLDDLKAAFKEETKAIYFETPSNP 147          
BLAST of FC871377 vs. ExPASy Swiss-Prot
Match: METC_LACLA (Cystathionine beta-lyase OS=Lactococcus lactis subsp. lactis GN=metC PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.717e-24
Identity = 53/128 (41.41%), Postives = 79/128 (61.72%), Query Frame = 2
Query:  305 GALSTPLYQTATFKQPSATENGAYDYTRSGNPTRDALESXXXXXXXXXXXXCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNP 688
            GA+S P+YQT+T+KQ    +   Y+Y+RSGNPTR ALE              F+SG+A + AV  L   G+ I+  DD+YGGT RL+ +V  KTG++   V+  +LD++ +A    TK ++ E+P+NP
Sbjct:   20 GAVSVPIYQTSTYKQNGLGQPKEYEYSRSGNPTRHALEELIADLEGGVQGFAFSSGLAGIHAVLSLFSAGDHIILADDVYGGTFRLMDKVLTKTGIIYDLVDLSNLDDLKAAFKEETKAIYFETPSNP 147          
BLAST of FC871377 vs. ExPASy Swiss-Prot
Match: METC_LACLC (Cystathionine beta-lyase OS=Lactococcus lactis subsp. cremoris GN=metC PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.954e-23
Identity = 53/128 (41.41%), Postives = 79/128 (61.72%), Query Frame = 2
Query:  305 GALSTPLYQTATFKQPSATENGAYDYTRSGNPTRDALESXXXXXXXXXXXXCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNP 688
            GA+S P+YQT+T+KQ    +   Y+Y+RSGNPTR ALE              F+SG+A + AV  L   G+ I+  DD+YGGT RL+ +V  KTG++   V+  +L+++ +A    TK V+ E+P+NP
Sbjct:   20 GAVSVPIYQTSTYKQNGLGQPKEYEYSRSGNPTRHALEELIADLEGGVQGFAFSSGLAGIHAVLSLFSAGDHIILADDVYGGTFRLVDKVLTKTGIIYDLVDLSNLEDLKAAFKAETKAVYFETPSNP 147          
BLAST of FC871377 vs. ExPASy Swiss-Prot
Match: CGL_HUMAN (Cystathionine gamma-lyase OS=Homo sapiens GN=CTH PE=1 SV=3)

HSP 1 Score: 108.227 bits (269), Expect = 4.354e-23
Identity = 51/131 (38.93%), Postives = 80/131 (61.07%), Query Frame = 2
Query:  308 ALSTPLYQTATFKQPSATENGAYDYTRSGNPTRDALESXXXXXXXXXXXXCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQI 700
            A+  P+  + TFKQ +  ++  ++Y+RSGNPTR+ LE              F SG+AA   +THLL  G++I+  DD+YGGT+R   +V  + G+ +  V+   +  + +AI P TKLVW+E+PTNP Q++
Sbjct:   36 AVVPPISLSTTFKQGAPGQHSGFEYSRSGNPTRNCLEKAVAALDGAKYCLAFASGLAATVTITHLLKAGDQIICMDDVYGGTNRYFRQVASEFGLKISFVDCSKIKLLEAAITPETKLVWIETPTNPTQKV 166          
BLAST of FC871377 vs. ExPASy Swiss-Prot
Match: METC_BACSU (Cystathionine beta-lyase metC OS=Bacillus subtilis GN=metC PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 4.814e-22
Identity = 53/128 (41.41%), Postives = 79/128 (61.72%), Query Frame = 2
Query:  305 GALSTPLYQTATFKQPSATENGAYDYTRSGNPTRDALESXXXXXXXXXXXXCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNP 688
            GA+S P+   +TF Q S  E GAYDY+RSG PTR ALE              F+SGMAA++    LL  G+ ++  +D+YGGT R+++ V  + G+    V+  D +EVA +I P TK++++E+P+NP
Sbjct:   24 GAVSVPIQHASTFHQSSFEEFGAYDYSRSGTPTRTALEETIAALEGGTRGFAFSSGMAAISTAFLLLSQGDHVLVTEDVYGGTFRMVTEVLTRFGIEHTFVDMTDRNEVARSIKPNTKVIYMETPSNP 151          
The following BLAST results are available for this feature:
BLAST of FC871377 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 28
Match NameE-valueIdentityDescription
METC_ARATH9.588e-6357.58Cystathionine beta-lyase, chloroplastic OS=Arabido... [more]
CBL_SCHPO5.495e-2643.92Cystathionine beta-lyase OS=Schizosaccharomyces po... [more]
MCCB_BACSU2.088e-2542.42Cystathionine gamma-lyase OS=Bacillus subtilis GN=... [more]
METB_HELPJ3.015e-2440.58Cystathionine gamma-synthase OS=Helicobacter pylor... [more]
METB_HELPY3.938e-2440.91Cystathionine gamma-synthase OS=Helicobacter pylor... [more]
METC_LACLM6.717e-2441.41Cystathionine beta-lyase OS=Lactococcus lactis sub... [more]
METC_LACLA6.717e-2441.41Cystathionine beta-lyase OS=Lactococcus lactis sub... [more]
METC_LACLC1.954e-2341.41Cystathionine beta-lyase OS=Lactococcus lactis sub... [more]
CGL_HUMAN4.354e-2338.93Cystathionine gamma-lyase OS=Homo sapiens GN=CTH P... [more]
METC_BACSU4.814e-2241.41Cystathionine beta-lyase metC OS=Bacillus subtilis... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAK2CE01FM1 AbsCFruit1 Citrus sinensis cDNA clone KN0AAK2CE01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC871377 ID=FC871377; Name=FC871377; organism=Citrus sinensis; type=EST; length=703bp
ACAAATGATGATTTTTTCTCTCCATCACAGGGCTTTCATCTCCAATACCT
ACACTGAACTCACCAACAGTGGTTCTTCAATACCTTTAAATTCCCCAACA
AGCTTTGGGTTTAGTAAAAGGCGGATAATATTTGCGAAGGAATTAAAACT
GAATTGCTCGATAGACAGGGAAAAGGAAATTGATGTCAGCACTTCAGCTC
TTGTGGATGATGTAGCTGAGTGTTTGGAAGAAGAAATGAGCGTGGAGGAG
GAGCCTGGTGTTTCTACATTATTGATGAATTTTTCTAATGAGTTTGATCC
TTATGGTGCGTTGAGCACTCCGCTTTATCAGACTGCGACATTTAAGCAAC
CTTCTGCGACAGAGAATGGCGCCTATGATTATACCAGAAGTGGAAATCCT
ACACGAGATGCCTTAGAAAGCCTCCTTGCAAAGCTTGATAAGGCCGACCA
AGCGCTTTGCTTCACCAGCGGAATGGCTGCTTTGGCTGCTGTTACTCATC
TTCTTGGAACTGGTGAAGAAATTGTTGCTGGAGATGACCTGTATGGTGGT
ACTGATCGTTTGTTATCACGAGTAACTCCTAAAACTGGGGTTGTAGTGAA
GCGTGTGAATACATGCGATCTAGATGAGGTTGCCTCTGCTATTGGTCCTT
GGACAAAGCTTGTCTGGGTGGAAAGTCCAACCAACCCTCGACAACAAATT
TGT
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