FC871180
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC871180 vs. ExPASy Swiss-Prot
Match: DXR_ARATH (1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplastic OS=Arabidopsis thaliana GN=DXR PE=2 SV=2) HSP 1 Score: 130.954 bits (328), Expect = 2.964e-30 Identity = 65/86 (75.58%), Postives = 71/86 (82.56%), Query Frame = 2 Query: 173 IAYAAGRAGGTMTGVLSATNENALEMFIDEKIGYLDIF*AEELT*DKHREYLLTSPSLEDIIHYDAWAREYAAGLQFSSGRSPVPA 430 +AYAAGRAGGTMTGVLSA NE A+EMFIDEKI YLDIF ELT DKHR L+TSPSLE+I+HYD WAREYAA +Q SSG PV A Sbjct: 392 LAYAAGRAGGTMTGVLSAANEKAVEMFIDEKISYLDIFKVVELTCDKHRNELVTSPSLEEIVHYDLWAREYAANVQLSSGARPVHA 477
BLAST of FC871180 vs. ExPASy Swiss-Prot
Match: DXR_ORYSJ (1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplastic OS=Oryza sativa subsp. japonica GN=DXR PE=2 SV=2) HSP 1 Score: 130.183 bits (326), Expect = 5.055e-30 Identity = 65/85 (76.47%), Postives = 71/85 (83.53%), Query Frame = 2 Query: 173 IAYAAGRAGGTMTGVLSATNENALEMFIDEKIGYLDIF*AEELT*DKHREYLLTSPSLEDIIHYDAWAREYAAGLQFSSGRSPVP 427 +AYAAGRAGGTMTGVLSA NE A+E+FIDEKIGYLDIF ELT D HR L+T PSLE+IIHYD WAREYAA LQ S+G SPVP Sbjct: 388 LAYAAGRAGGTMTGVLSAANEKAVELFIDEKIGYLDIFKVVELTCDAHRNELVTRPSLEEIIHYDLWAREYAASLQPSTGLSPVP 472
BLAST of FC871180 vs. ExPASy Swiss-Prot
Match: DXR_MENPI (1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplastic OS=Mentha piperita GN=DXR PE=2 SV=2) HSP 1 Score: 122.094 bits (305), Expect = 1.377e-27 Identity = 60/83 (72.29%), Postives = 68/83 (81.93%), Query Frame = 2 Query: 173 IAYAAGRAGGTMTGVLSATNENALEMFIDEKIGYLDIF*AEELT*DKHREYLLTSPSLEDIIHYDAWAREYAAGLQFSSGRSP 421 +AYAAGRAGGTMTGVLSA NE A+EMFIDEKIGYLDIF ELT DKHR + SPSLE+I+HYD WAR+YAA + S+G SP Sbjct: 385 LAYAAGRAGGTMTGVLSAANEKAVEMFIDEKIGYLDIFKVVELTCDKHRSEMAVSPSLEEIVHYDQWARDYAATVLKSAGLSP 467
BLAST of FC871180 vs. ExPASy Swiss-Prot
Match: DXR_PROMM (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Prochlorococcus marinus (strain MIT 9313) GN=dxr PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 1.478e-13 Identity = 42/88 (47.73%), Postives = 57/88 (64.77%), Query Frame = 2 Query: 173 IAYAAGRAGGTMTGVLSATNENALEMFIDEKIGYLDIF*AEELT*DKHREYLLTSPSLEDIIHYDAWAREYAAGLQFSSG--RSPVPA 430 +AYAAGRAGGTM VL+A NE A+ F++E+I +LDI E ++H+ L T P L+D++ DAWAR+ A Q G R P+PA Sbjct: 323 LAYAAGRAGGTMPAVLNAANEEAVAQFLEERIHFLDIPEVIEAACERHKPDLQTQPQLDDVLAVDAWARK-AVQEQVKRGTRRLPLPA 409
BLAST of FC871180 vs. ExPASy Swiss-Prot
Match: DXR_ANASP (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Anabaena sp. (strain PCC 7120) GN=dxr PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 1.478e-13 Identity = 49/113 (43.36%), Postives = 66/113 (58.41%), Query Frame = 2 Query: 65 LPAH*ALIFP*RV---WILSKLRYQRNILQTQIDIHQKI----IAYAAGRAGGTMTGVLSATNENALEMFIDEKIGYLDIF*AEELT*DKHREYLLTSPSLEDIIHYDAWARE 382 LP AL +P R+ W L N+ + D HQK +AYAAGRAGG+M VL+A NE + +F+DEKI +LDI EL D+H+ +PSL+DI+ D WAR+ Sbjct: 269 LPLLYALSWPERIYTDWERLNLVKAGNLTFREPD-HQKYPCMQLAYAAGRAGGSMPAVLNAANEQVVALFLDEKIKFLDIPRCIELVCDRHQNDNCANPSLDDILAADQWARQ 380
BLAST of FC871180 vs. ExPASy Swiss-Prot
Match: DXR_ANAVT (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=dxr PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.930e-13 Identity = 49/113 (43.36%), Postives = 66/113 (58.41%), Query Frame = 2 Query: 65 LPAH*ALIFP*RV---WILSKLRYQRNILQTQIDIHQKI----IAYAAGRAGGTMTGVLSATNENALEMFIDEKIGYLDIF*AEELT*DKHREYLLTSPSLEDIIHYDAWARE 382 LP AL +P R+ W L N+ + D HQK +AYAAGRAGG+M VL+A NE + +F+DEKI +LDI EL D+H+ +PSL+DI+ D WAR+ Sbjct: 268 LPLLYALSWPERIYTDWEPLNLVKAGNLTFREPD-HQKYPCMQLAYAAGRAGGSMPAVLNAANEQVVALFLDEKIKFLDIPRCIELVCDRHQNDNCANPSLDDILAADQWARQ 379
BLAST of FC871180 vs. ExPASy Swiss-Prot
Match: DXR_SYNPX (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Synechococcus sp. (strain WH8102) GN=dxr PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 3.292e-13 Identity = 41/90 (45.56%), Postives = 55/90 (61.11%), Query Frame = 2 Query: 173 IAYAAGRAGGTMTGVLSATNENALEMFIDEKIGYLDIF*AEELT*DKHREYLLTSPSLEDIIHYDAWAREYAAGLQFSSGRSPVPA*LLA 442 +AYAAGRAGGTM V++A NE A+ F++EKI +LDI E ++H+ L+ P LED++ D WAR A Q G + VP LA Sbjct: 320 LAYAAGRAGGTMPAVMNAANEEAVAQFLEEKIHFLDIPVVIEAACERHKADLIAHPQLEDVLAVDQWAR-MAVREQVKRGTTRVPLAALA 408
BLAST of FC871180 vs. ExPASy Swiss-Prot
Match: DXR_SYNS9 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Synechococcus sp. (strain CC9902) GN=dxr PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 7.334e-13 Identity = 37/85 (43.53%), Postives = 54/85 (63.53%), Query Frame = 2 Query: 173 IAYAAGRAGGTMTGVLSATNENALEMFIDEKIGYLDIF*AEELT*DKHREYLLTSPSLEDIIHYDAWAREYAAGLQFSSGRSPVP 427 +AYAAGRAGGTM V++A NE A+ F++E+I +LDI E ++H+ L+ P L+D++ D WAR A Q S G + +P Sbjct: 328 LAYAAGRAGGTMPAVMNAANEEAVAQFLEERIHFLDIPEVIEAACERHKPDLMAHPQLDDVLEVDQWART-AVREQVSRGTTRIP 411
BLAST of FC871180 vs. ExPASy Swiss-Prot
Match: DXR_CYAA5 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Cyanothece sp. (strain ATCC 51142) GN=dxr PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 9.578e-13 Identity = 37/70 (52.86%), Postives = 47/70 (67.14%), Query Frame = 2 Query: 173 IAYAAGRAGGTMTGVLSATNENALEMFIDEKIGYLDIF*AEELT*DKHREYLLTSPSLEDIIHYDAWARE 382 +AYAAG AGG M VL+A NE A+ +F+ EKI +LDI E T D R++ + PSLEDI+ D WARE Sbjct: 310 LAYAAGNAGGAMPAVLNAANEQAVALFLAEKIAFLDIPKVIEKTCDNFRDHNRSQPSLEDILEADKWARE 379
BLAST of FC871180 vs. ExPASy Swiss-Prot
Match: DXR_SYNP6 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=dxr PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.251e-12 Identity = 35/71 (49.30%), Postives = 49/71 (69.01%), Query Frame = 2 Query: 173 IAYAAGRAGGTMTGVLSATNENALEMFIDEKIGYLDIF*AEELT*DKHREYLLTSPSLEDIIHYDAWAREY 385 +AYAAGR GGTM VL+A NE A+ +F++E+I + DI E D+H+ PSL+DI+ YDAWAR++ Sbjct: 320 LAYAAGRKGGTMPAVLNAANEQAVALFLEEQIHFSDIPRLIERACDRHQTEWQQQPSLDDILAYDAWARQF 390 The following BLAST results are available for this feature:
BLAST of FC871180 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 24
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Sequences
The
following sequences are available for this feature:
EST sequence >FC871180 ID=FC871180; Name=FC871180; organism=Citrus sinensis; type=EST; length=494bpback to top |