EY756715

Overview
NameEY756715
Unique NameEY756715
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length714
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756715 vs. ExPASy Swiss-Prot
Match: PSMD3_TOBAC (Probable 26S proteasome non-ATPase regulatory subunit 3 OS=Nicotiana tabacum GN=21D7 PE=2 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 1.450e-58
Identity = 115/139 (82.73%), Postives = 118/139 (84.89%), Query Frame = 3
Query:    6 RPRHNVIRTGLRNISISYSRISLADVAKKLRLDSANPVADAESIVSKAIRDGAIDATVDHANGWMVSKETGDIYSTNEPQLAFNSRIAFCLNMHNEAVRALRFPPNSHXXXXXXXXXXXXXXXXXXLAKHIAEEDDDEF 422
            R RHNVIRTGLRNISISYSRISL DVAKKLRLDS NPVADAESIVSKAIRDGAIDAT+DHANGWMVSKETGDIYSTNEPQ+AFNSRIAFCLNMHNEAVRALRFPPNSH                  LAKHIAEEDDD+F
Sbjct:  350 RLRHNVIRTGLRNISISYSRISLVDVAKKLRLDSPNPVADAESIVSKAIRDGAIDATLDHANGWMVSKETGDIYSTNEPQIAFNSRIAFCLNMHNEAVRALRFPPNSHKEKESAEKRRERQQQEQELAKHIAEEDDDDF 488          
BLAST of EY756715 vs. ExPASy Swiss-Prot
Match: PSMD3_DAUCA (Probable 26S proteasome non-ATPase regulatory subunit 3 OS=Daucus carota GN=21D7 PE=1 SV=2)

HSP 1 Score: 222.631 bits (566), Expect = 1.603e-57
Identity = 114/139 (82.01%), Postives = 116/139 (83.45%), Query Frame = 3
Query:    6 RPRHNVIRTGLRNISISYSRISLADVAKKLRLDSANPVADAESIVSKAIRDGAIDATVDHANGWMVSKETGDIYSTNEPQLAFNSRIAFCLNMHNEAVRALRFPPNSHXXXXXXXXXXXXXXXXXXLAKHIAEEDDDEF 422
            R RHNVIRTGLRNISISYSRISL DVA+KLRLDS NPVADAESIVSKAIRDGAIDAT+DHANGWMVSKETGDIYSTNEPQ AFNSRIAFCLNMHNEAVRALRFP NSH                  LAKHIAEEDDDEF
Sbjct:  351 RLRHNVIRTGLRNISISYSRISLVDVARKLRLDSPNPVADAESIVSKAIRDGAIDATIDHANGWMVSKETGDIYSTNEPQAAFNSRIAFCLNMHNEAVRALRFPANSHKDKESAEKRRERQQQEQELAKHIAEEDDDEF 489          
BLAST of EY756715 vs. ExPASy Swiss-Prot
Match: PSD31_ARATH (Probable 26S proteasome non-ATPase regulatory subunit 3a OS=Arabidopsis thaliana GN=EMB2719 PE=1 SV=3)

HSP 1 Score: 213.001 bits (541), Expect = 1.270e-54
Identity = 109/139 (78.42%), Postives = 115/139 (82.73%), Query Frame = 3
Query:    6 RPRHNVIRTGLRNISISYSRISLADVAKKLRLDSANPVADAESIVSKAIRDGAIDATVDHANGWMVSKETGDIYSTNEPQLAFNSRIAFCLNMHNEAVRALRFPPNSHXXXXXXXXXXXXXXXXXXLAKHIAEEDDDEF 422
            R RHNVIRTGLRNISISYSRISL DVAKKLRL+S NPVADAESIV+KAIRDGAIDAT+DH NG MVSKETGDIYSTNEPQ AFNSRIAFCLNMHNEAVRALRFPPN+H                  LAKH+AEEDDD+F
Sbjct:  350 RLRHNVIRTGLRNISISYSRISLPDVAKKLRLNSENPVADAESIVAKAIRDGAIDATIDHKNGCMVSKETGDIYSTNEPQTAFNSRIAFCLNMHNEAVRALRFPPNTHKEKESDEKRRERKQQEEELAKHMAEEDDDDF 488          
BLAST of EY756715 vs. ExPASy Swiss-Prot
Match: PSD32_ARATH (Probable 26S proteasome non-ATPase regulatory subunit 3b OS=Arabidopsis thaliana GN=At1g75990 PE=2 SV=2)

HSP 1 Score: 211.075 bits (536), Expect = 4.828e-54
Identity = 108/139 (77.70%), Postives = 116/139 (83.45%), Query Frame = 3
Query:    6 RPRHNVIRTGLRNISISYSRISLADVAKKLRLDSANPVADAESIVSKAIRDGAIDATVDHANGWMVSKETGDIYSTNEPQLAFNSRIAFCLNMHNEAVRALRFPPNSHXXXXXXXXXXXXXXXXXXLAKHIAEEDDDEF 422
            R RHNVIRTGLRNISISYSRISL DVA+KLRL+SANPVADAESIV+KAIRDGAIDAT+DH NG MVSKETGDIYSTNEPQ AFNSRIAFCLNMHNEAVRALRFPPN+H                  LAK++AEEDDD+F
Sbjct:  349 RLRHNVIRTGLRNISISYSRISLQDVAQKLRLNSANPVADAESIVAKAIRDGAIDATIDHKNGCMVSKETGDIYSTNEPQTAFNSRIAFCLNMHNEAVRALRFPPNTHREKESEEKRREMKQQEEELAKYMAEEDDDDF 487          
BLAST of EY756715 vs. ExPASy Swiss-Prot
Match: PSMD3_MOUSE (26S proteasome non-ATPase regulatory subunit 3 OS=Mus musculus GN=Psmd3 PE=2 SV=2)

HSP 1 Score: 145.206 bits (365), Expect = 3.253e-34
Identity = 77/140 (55.00%), Postives = 100/140 (71.43%), Query Frame = 3
Query:    6 RPRHNVIRTGLRNISISYSRISLADVAKKLRLDSANPVADAESIVSKAIRDGAIDATVDHANGWMVSKETGDIYSTNEPQLAFNSRIAFCLNMHNEAVRALRFPPNSH-XXXXXXXXXXXXXXXXXXLAKHIAEEDDDEF 422
            R RHNVI+TG+R IS+SYSRISLAD+A+KL+LDS     DAE IV+KAIRDG I+A+++H  G++ SKE  DIYST EPQLAF+ RI+FCL++HN +V+A+RFPP S+                    AK +AE+DDD F
Sbjct:  393 RLRHNVIKTGVRMISLSYSRISLADIAQKLQLDSPE---DAEFIVAKAIRDGVIEASINHEKGYVQSKEMIDIYSTREPQLAFHQRISFCLDIHNMSVKAMRFPPKSYNKDLESAEERREREQQDLEFAKEMAEDDDDSF 529          
BLAST of EY756715 vs. ExPASy Swiss-Prot
Match: PSMD3_HUMAN (26S proteasome non-ATPase regulatory subunit 3 OS=Homo sapiens GN=PSMD3 PE=1 SV=2)

HSP 1 Score: 145.206 bits (365), Expect = 3.253e-34
Identity = 77/140 (55.00%), Postives = 100/140 (71.43%), Query Frame = 3
Query:    6 RPRHNVIRTGLRNISISYSRISLADVAKKLRLDSANPVADAESIVSKAIRDGAIDATVDHANGWMVSKETGDIYSTNEPQLAFNSRIAFCLNMHNEAVRALRFPPNSH-XXXXXXXXXXXXXXXXXXLAKHIAEEDDDEF 422
            R RHNVI+TG+R IS+SYSRISLAD+A+KL+LDS     DAE IV+KAIRDG I+A+++H  G++ SKE  DIYST EPQLAF+ RI+FCL++HN +V+A+RFPP S+                    AK +AE+DDD F
Sbjct:  397 RLRHNVIKTGVRMISLSYSRISLADIAQKLQLDSPE---DAEFIVAKAIRDGVIEASINHEKGYVQSKEMIDIYSTREPQLAFHQRISFCLDIHNMSVKAMRFPPKSYNKDLESAEERREREQQDLEFAKEMAEDDDDSF 533          
BLAST of EY756715 vs. ExPASy Swiss-Prot
Match: PSMD3_BOVIN (26S proteasome non-ATPase regulatory subunit 3 OS=Bos taurus GN=PSMD3 PE=2 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 3.253e-34
Identity = 77/140 (55.00%), Postives = 100/140 (71.43%), Query Frame = 3
Query:    6 RPRHNVIRTGLRNISISYSRISLADVAKKLRLDSANPVADAESIVSKAIRDGAIDATVDHANGWMVSKETGDIYSTNEPQLAFNSRIAFCLNMHNEAVRALRFPPNSH-XXXXXXXXXXXXXXXXXXLAKHIAEEDDDEF 422
            R RHNVI+TG+R IS+SYSRISLAD+A+KL+LDS     DAE IV+KAIRDG I+A+++H  G++ SKE  DIYST EPQLAF+ RI+FCL++HN +V+A+RFPP S+                    AK +AE+DDD F
Sbjct:  397 RLRHNVIKTGVRMISLSYSRISLADIAQKLQLDSPE---DAEFIVAKAIRDGVIEASINHEKGYVQSKEMIDIYSTREPQLAFHQRISFCLDIHNMSVKAMRFPPKSYNKDLESAEERREREQQDLEFAKEMAEDDDDSF 533          
BLAST of EY756715 vs. ExPASy Swiss-Prot
Match: PSMD3_DROME (Probable 26S proteasome non-ATPase regulatory subunit 3 OS=Drosophila melanogaster GN=Rpn3 PE=1 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 9.466e-34
Identity = 77/140 (55.00%), Postives = 99/140 (70.71%), Query Frame = 3
Query:    6 RPRHNVIRTGLRNISISYSRISLADVAKKLRLDSANPVADAESIVSKAIRDGAIDATVDHANGWMVSKETGDIYSTNEPQLAFNSRIAFCLNMHNEAVRALRFPPNSH-XXXXXXXXXXXXXXXXXXLAKHIAEEDDDEF 422
            R RHNVI+T +R+I +SYSRIS  D+AK+L LDSA    DAE IVSKAIRDG I+AT+D A  +M SKE+ DIYST EPQLAF+ RI+FCLN+HN++V+A+R+PP S+                   LAK +AE+D+D F
Sbjct:  358 RLRHNVIKTAIRSIGLSYSRISPQDIAKRLMLDSAE---DAEFIVSKAIRDGVIEATLDPAQNFMRSKESTDIYSTREPQLAFHERISFCLNLHNQSVKAMRYPPKSYGKDLESAEERREREQQDLELAKEMAEDDEDGF 494          
BLAST of EY756715 vs. ExPASy Swiss-Prot
Match: PSMD3_ANOST (Probable 26S proteasome non-ATPase regulatory subunit 3 OS=Anopheles stephensi GN=DOXA2 PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.109e-33
Identity = 75/140 (53.57%), Postives = 99/140 (70.71%), Query Frame = 3
Query:    6 RPRHNVIRTGLRNISISYSRISLADVAKKLRLDSANPVADAESIVSKAIRDGAIDATVDHANGWMVSKETGDIYSTNEPQLAFNSRIAFCLNMHNEAVRALRFPPNSH-XXXXXXXXXXXXXXXXXXLAKHIAEEDDDEF 422
            R RHNVI+T +R+I ++YSRIS  D+A+KL LDS     DAE IV+KAIRDG IDAT+D   G+M +KE+ DIYST EPQLAF+ RI+FCL++HN++V+A+R+PP S+                   LAK +AEEDDD+F
Sbjct:  364 RLRHNVIKTAIRSIGLAYSRISPQDIARKLGLDSPE---DAEFIVAKAIRDGVIDATLDPEKGYMRTKESTDIYSTREPQLAFHQRISFCLDLHNQSVKAMRYPPKSYGKELESAEERREREQQDLELAKEMAEEDDDDF 500          
BLAST of EY756715 vs. ExPASy Swiss-Prot
Match: PSMD3_ANOGA (Probable 26S proteasome non-ATPase regulatory subunit 3 OS=Anopheles gambiae GN=Dox-A2 PE=3 SV=2)

HSP 1 Score: 140.584 bits (353), Expect = 8.013e-33
Identity = 75/140 (53.57%), Postives = 98/140 (70.00%), Query Frame = 3
Query:    6 RPRHNVIRTGLRNISISYSRISLADVAKKLRLDSANPVADAESIVSKAIRDGAIDATVDHANGWMVSKETGDIYSTNEPQLAFNSRIAFCLNMHNEAVRALRFPPNSH-XXXXXXXXXXXXXXXXXXLAKHIAEEDDDEF 422
            R RHNVI+T +R+I ++YSRIS  D+A+KL LDS     DAE IV+KAIRDG I+AT+D   G+M SKE+ DIYST EPQLAF+ RI+FCL++HN++V+A+R+PP S+                   LAK +AEEDDD F
Sbjct:  360 RLRHNVIKTAIRSIGLAYSRISPQDIARKLGLDSPE---DAEFIVAKAIRDGVIEATLDPEKGYMRSKESTDIYSTREPQLAFHQRISFCLDLHNQSVKAMRYPPKSYGKELESAEERREREQQDLELAKEMAEEDDDGF 496          
The following BLAST results are available for this feature:
BLAST of EY756715 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
PSMD3_TOBAC1.450e-5882.73Probable 26S proteasome non-ATPase regulatory subu... [more]
PSMD3_DAUCA1.603e-5782.01Probable 26S proteasome non-ATPase regulatory subu... [more]
PSD31_ARATH1.270e-5478.42Probable 26S proteasome non-ATPase regulatory subu... [more]
PSD32_ARATH4.828e-5477.70Probable 26S proteasome non-ATPase regulatory subu... [more]
PSMD3_MOUSE3.253e-3455.0026S proteasome non-ATPase regulatory subunit 3 OS=... [more]
PSMD3_HUMAN3.253e-3455.0026S proteasome non-ATPase regulatory subunit 3 OS=... [more]
PSMD3_BOVIN3.253e-3455.0026S proteasome non-ATPase regulatory subunit 3 OS=... [more]
PSMD3_DROME9.466e-3455.00Probable 26S proteasome non-ATPase regulatory subu... [more]
PSMD3_ANOST2.109e-3353.57Probable 26S proteasome non-ATPase regulatory subu... [more]
PSMD3_ANOGA8.013e-3353.57Probable 26S proteasome non-ATPase regulatory subu... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-011-H02-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756715 ID=EY756715; Name=EY756715; organism=Citrus sinensis; type=EST; length=714bp
CCACGCGTCCGCGGCATAATGTCATTAGGACTGGGTTGCGGAACATCAGC
ATCTCGTATTCTCGCATCTCACTTGCTGATGTTGCCAAGAAGCTGAGATT
GGACTCTGCCAATCCTGTTGCTGATGCTGAGAGTATTGTTTCCAAGGCAA
TCCGAGATGGTGCGATTGATGCAACAGTGGATCATGCAAATGGCTGGATG
GTGTCAAAGGAGACAGGAGACATCTACTCTACAAACGAACCTCAGCTTGC
ATTCAATTCAAGGATTGCTTTCTGCCTCAATATGCATAACGAGGCAGTTC
GTGCACTTCGTTTTCCCCCAAATTCCCACAAGGAAAAGGAAAGTGCCGAG
AAGAGGAGGGAGAGACAGCAGCAGGAACAAGAGCTTGCAAAACACATTGC
TGAGGAGGATGACGATGAGTTTTAAATTAGTTATCTGCAAGCACATCTTT
TTTTCCCTACAGAATGCTTTCATCTAGTTCCGCACCTTCCTCTGAAATAC
TTCTGTTAAAGCATTCTGATTTTCGTCTTCTGGTTGACCATTATATTTGA
TAGGTCTTGCTCTTAGTTCATGTCTTAGGCTTTCTTTGTTAAACTTGAGG
AACCGCTGCATTATTGTTTTGAAGTAACCCTCCGGTTGCTCGTCTTAATC
TTTGTTTTTGTCATTGCAGACCATGGCCATTTGATTCAAAAAAAAAAAAA
AAAAAAAAAAAAAA
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