FC868539

Overview
NameFC868539
Unique NameFC868539
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length676
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig17 contig Ccv1_Contig17:112..787. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC868539 vs. ExPASy Swiss-Prot
Match: ACSF1_THEEB (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase 1 OS=Thermosynechococcus elongatus (strain BP-1) GN=acsF1 PE=3 SV=2)

HSP 1 Score: 196.052 bits (497), Expect = 1.456e-49
Identity = 94/149 (63.09%), Postives = 120/149 (80.54%), Query Frame = 3
Query:  222 KTAIKETLLTPRFYTTDFDEMETLFNTEINKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFVTKARKYTF 668
            K   KET+LTPRFYTTDF+ M  +  TE     N+AE EA+L+EF+ DYN+ HFVR++EF+++ D + G  R++F+EFLERSCTAEFSGFLLYKEL RRLK  NP++AE F+LMSRDEARHAGFLNK ++DFN +LDLGF+T+ R YT+
Sbjct:   18 KAPAKETILTPRFYTTDFEAMANMDITE-----NKAELEAILEEFRCDYNRHHFVRDEEFEQSWDHIDGETRRLFIEFLERSCTAEFSGFLLYKELSRRLKDRNPLLAECFALMSRDEARHAGFLNKAMADFNLSLDLGFLTQHRSYTY 161          
BLAST of FC868539 vs. ExPASy Swiss-Prot
Match: ACSF_PORYE (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase OS=Porphyra yezoensis GN=acsF PE=3 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 2.484e-49
Identity = 95/151 (62.91%), Postives = 120/151 (79.47%), Query Frame = 3
Query:  222 KTAIKETLLTPRFYTTDFDEMETLFNTEINKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFVTKARKYTFVS 674
            +T+ KETLLTPRFYTTDF+EM    N +I+   NQ +F A+L+EF+ DYN  HF+R++EF ++   ++   + +F+EFLERSCTAEFSGFLLYKEL R+LK  NPV+AE F LMSRDEARHAGFLNK + DFN +LDLGF+TK+RKYTF S
Sbjct:    9 QTSSKETLLTPRFYTTDFEEMA---NMDISG--NQEDFLAILEEFRADYNSEHFIRDEEFNQSWSNLEHKTKSLFIEFLERSCTAEFSGFLLYKELSRKLKDRNPVIAECFLLMSRDEARHAGFLNKAIGDFNLSLDLGFLTKSRKYTFFS 154          
BLAST of FC868539 vs. ExPASy Swiss-Prot
Match: ACSF_PORPU (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase OS=Porphyra purpurea GN=acsF PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 2.103e-48
Identity = 90/147 (61.22%), Postives = 116/147 (78.91%), Query Frame = 3
Query:  234 KETLLTPRFYTTDFDEMETLFNTEINKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFVTKARKYTFVS 674
            +ETLLTPRFYTTDF+EM ++  +E     N+ +F A+L+EF+ DYN  HF+R +EF ++   ++   + +F+EFLERSCTAEFSGFLLYKEL R+LK +NP++AE F LMSRDEARHAGFLNK + DFN +LDLGF+TK RKYTF S
Sbjct:   13 RETLLTPRFYTTDFEEMASMNISE-----NEQDFFAILEEFRADYNSQHFIRGEEFNQSWSNLETKTKSLFIEFLERSCTAEFSGFLLYKELSRKLKDSNPIIAECFLLMSRDEARHAGFLNKAIGDFNLSLDLGFLTKTRKYTFFS 154          
BLAST of FC868539 vs. ExPASy Swiss-Prot
Match: ACSF_SYNPX (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase OS=Synechococcus sp. (strain WH8102) GN=acsF PE=3 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 6.766e-47
Identity = 89/149 (59.73%), Postives = 116/149 (77.85%), Query Frame = 3
Query:  222 KTAIKETLLTPRFYTTDFDEMETLFNTEINKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFVTKARKYTF 668
            K  +K+T+LTPRFYTTDFD+M  +     + + N+AE EA+ +EF+ DYN+ HFVRN +F  AADK+    R++FVEFLE+SCT+EFSGFLLYKEL RR+K+ NP++AE F+ M+RDEARHAGFLNK +SDF   LDLGF+T  + YTF
Sbjct:   16 KDPVKDTILTPRFYTTDFDDMAAM-----DLRPNEAELEAICEEFRKDYNRHHFVRNDDFDGAADKLDPETRRVFVEFLEQSCTSEFSGFLLYKELSRRIKQQNPLLAECFAHMARDEARHAGFLNKAMSDFGMQLDLGFLTANKDYTF 159          
BLAST of FC868539 vs. ExPASy Swiss-Prot
Match: ACSF_SYNSC (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase OS=Synechococcus sp. (strain CC9605) GN=acsF PE=3 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 1.968e-46
Identity = 88/149 (59.06%), Postives = 116/149 (77.85%), Query Frame = 3
Query:  222 KTAIKETLLTPRFYTTDFDEMETLFNTEINKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFVTKARKYTF 668
            K  +K+T+LTPRFYTTDF+ M  +     + + N+AE EA+ +EF+ DYN+ HFVRN+EF+ AADK+    R++F+EFLE+SCT+EFSGFLLYKEL RR+K  NP++AE F+ M+RDEARHAGFLNK +SDF   LDLGF+T  + YTF
Sbjct:   16 KDPVKDTILTPRFYTTDFEAMAAM-----DLQPNEAELEAICEEFRKDYNRHHFVRNEEFEGAADKLDPETRKVFIEFLEQSCTSEFSGFLLYKELSRRIKAKNPLLAECFAHMARDEARHAGFLNKSMSDFGMQLDLGFLTANKDYTF 159          
BLAST of FC868539 vs. ExPASy Swiss-Prot
Match: ACSF_CYAME (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase OS=Cyanidioschyzon merolae GN=acsF PE=3 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 1.968e-46
Identity = 94/144 (65.28%), Postives = 113/144 (78.47%), Query Frame = 3
Query:  237 ETLLTPRFYTTDFDEMETLFNTEINKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFVTKARKYTF 668
            +TLLTPRFYTTDFD+M      +I+K  N+AE EA++ EF+ DYNQTHF+R+ EF +   +M    RQ F EFLERSCTAEFSGFLLYKEL RRLK TNP++AE F  MSRDEARHAGFLNK ++DF  +LDLGF+TK R+YTF
Sbjct:   12 QTLLTPRFYTTDFDQMAKY---DISK--NRAEIEAIVNEFRKDYNQTHFIRDDEFDQVWTQMPESKRQWFKEFLERSCTAEFSGFLLYKELSRRLKDTNPLLAEGFGYMSRDEARHAGFLNKAMADFGVSLDLGFLTKHRQYTF 150          
BLAST of FC868539 vs. ExPASy Swiss-Prot
Match: ACSF_SYNS3 (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase OS=Synechococcus sp. (strain CC9311) GN=acsF PE=3 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 4.385e-46
Identity = 89/149 (59.73%), Postives = 114/149 (76.51%), Query Frame = 3
Query:  222 KTAIKETLLTPRFYTTDFDEMETLFNTEINKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFVTKARKYTF 668
            K   K+T+LTPRFYTTDF+ M  +     + + N+AE EA+ +EF+ DYN+ HFVRN EF  AAD++    R++FVEFLE+SCT+EFSGFLLYKEL RR+K  NP++AE FS M+RDEARHAGFLNK +SDF   LDLGF+T ++ YTF
Sbjct:   20 KDPAKDTILTPRFYTTDFEAMAAM-----DLRPNEAELEAICEEFRKDYNRHHFVRNGEFDGAADQLDPETRKVFVEFLEQSCTSEFSGFLLYKELSRRIKTKNPLLAECFSHMARDEARHAGFLNKSMSDFGLQLDLGFLTSSKSYTF 163          
BLAST of FC868539 vs. ExPASy Swiss-Prot
Match: ACSF_SYNPW (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase OS=Synechococcus sp. (strain WH7803) GN=acsF PE=3 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 4.385e-46
Identity = 89/149 (59.73%), Postives = 114/149 (76.51%), Query Frame = 3
Query:  222 KTAIKETLLTPRFYTTDFDEMETLFNTEINKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFVTKARKYTF 668
            K   K+T+LTPRFYTTDF+ M  +     + + N+AE EA+ +EF+ DYN+ HFVRN EF+ AADK+    R++FVEFLE+SCT+EFSGFLLYKEL RR+K  NP++AE F+ M+RDEARHAGFLNK +SDF   LDLGF+T  + YTF
Sbjct:   20 KDPAKDTILTPRFYTTDFEAMAAM-----DLRPNEAELEAICEEFRKDYNRHHFVRNDEFEGAADKLDPETRRVFVEFLEQSCTSEFSGFLLYKELSRRIKTRNPLLAECFAHMARDEARHAGFLNKSMSDFGLQLDLGFLTANKSYTF 163          
BLAST of FC868539 vs. ExPASy Swiss-Prot
Match: ACSF_CYACA (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase OS=Cyanidium caldarium GN=acsF PE=3 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 9.769e-46
Identity = 91/149 (61.07%), Postives = 113/149 (75.84%), Query Frame = 3
Query:  222 KTAIKETLLTPRFYTTDFDEMETLFNTEINKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFVTKARKYTF 668
            K  IKETLL PRFYTTDFDE+     +  +   N  E EA++ EF++DYN+ HF+R++EF     ++    +Q+FVEFLERSCTAEFSGFLLYKEL R+LK+  PV+AE F LMSRDEARHAGFLNK ++DFN  LDLGF+TK R+YTF
Sbjct:   11 KKTIKETLLAPRFYTTDFDEI-----SRYDISSNFEEIEAIVNEFRSDYNKKHFIRDEEFDRHWSQIDAQTKQMFVEFLERSCTAEFSGFLLYKELARKLKEKMPVLAEGFLLMSRDEARHAGFLNKAMADFNLTLDLGFMTKNRRYTF 154          
BLAST of FC868539 vs. ExPASy Swiss-Prot
Match: ACSF_SYNR3 (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase OS=Synechococcus sp. (strain RCC307) GN=acsF PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 2.842e-45
Identity = 87/149 (58.39%), Postives = 113/149 (75.84%), Query Frame = 3
Query:  222 KTAIKETLLTPRFYTTDFDEMETLFNTEINKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFVTKARKYTF 668
            K  +K+T+LTPRFYTTDF+ M  +     + + NQ E EA+ +EF+ DYN+ HFVRN+ F  AADK+    R++FVEFLE+SCT+EFSGFLLYKEL RR+K+ NP++AE F+ M+RDEARHAGFLNK + DF   LDLGF+T  + YTF
Sbjct:   20 KDPVKDTILTPRFYTTDFEAMAAM-----DLRPNQEELEAICEEFRKDYNRHHFVRNEAFDGAADKLDPETRRVFVEFLEQSCTSEFSGFLLYKELSRRIKQKNPLLAECFAHMARDEARHAGFLNKAMGDFGVQLDLGFLTANKAYTF 163          
The following BLAST results are available for this feature:
BLAST of FC868539 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
ACSF1_THEEB1.456e-4963.09Magnesium-protoporphyrin IX monomethyl ester [oxid... [more]
ACSF_PORYE2.484e-4962.91Magnesium-protoporphyrin IX monomethyl ester [oxid... [more]
ACSF_PORPU2.103e-4861.22Magnesium-protoporphyrin IX monomethyl ester [oxid... [more]
ACSF_SYNPX6.766e-4759.73Magnesium-protoporphyrin IX monomethyl ester [oxid... [more]
ACSF_SYNSC1.968e-4659.06Magnesium-protoporphyrin IX monomethyl ester [oxid... [more]
ACSF_CYAME1.968e-4665.28Magnesium-protoporphyrin IX monomethyl ester [oxid... [more]
ACSF_SYNS34.385e-4659.73Magnesium-protoporphyrin IX monomethyl ester [oxid... [more]
ACSF_SYNPW4.385e-4659.73Magnesium-protoporphyrin IX monomethyl ester [oxid... [more]
ACSF_CYACA9.769e-4661.07Magnesium-protoporphyrin IX monomethyl ester [oxid... [more]
ACSF_SYNR32.842e-4558.39Magnesium-protoporphyrin IX monomethyl ester [oxid... [more]

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Properties
Property NameValue
Genbank descriptionC31001F08EF AbioticL1 Citrus clementina cDNA clone C31001F08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868539 ID=FC868539; Name=FC868539; organism=Citrus clementina; type=EST; length=676bp
ACTCTCTAGTTCCTCCCCTGGTTCCAGAAATGGCAGCTGAGATGGCACTG
GTCAAACCGATTAGCAAATTCAGCACCATCGCCACCACTACTAAGCCTAG
GTTCAGCTACCCGAAAGCAACATGTACATCTCTGAGCACAAGATTTTGTA
CAATCAAAATGTCAGCAACTTCAGAGCAAGCGGCTGCTGCCACTGCCCAA
AAGCCAAGCAAGAAATCAAACAAAACTGCTATCAAGGAGACCCTTCTGAC
ACCAAGGTTTTATACAACAGATTTTGATGAAATGGAGACCCTTTTCAACA
CTGAGATCAACAAGAAGCTCAACCAGGCTGAATTTGAGGCATTGCTTCAA
GAATTCAAGACTGATTATAACCAGACTCACTTTGTGAGGAACAAGGAGTT
CAAGGAAGCTGCTGACAAGATGCAAGGCCCTCTCAGGCAGATCTTTGTTG
AGTTCTTGGAGAGGTCTTGCACTGCTGAGTTCTCTGGTTTCCTTCTTTAC
AAAGAGCTCGGAAGGAGACTCAAGAAAACCAACCCAGTGGTAGCTGAGAT
TTTCTCTCTGATGTCCAGGGATGAAGCCAGGCATGCCGGGTTTCTGAACA
AGGGGCTATCTGATTTCAATTATGCATTGGACTTGGGCTTCGTGACNAAA
GCTAGGAAATACACATTTGTCAGCCA
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