FC868539

Overview
NameFC868539
Unique NameFC868539
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length676
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig17 contig Ccv1_Contig17:112..787. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC868539 vs. ExPASy Swiss-Prot
Match: ACSF1_ANASP (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase 1 OS=Anabaena sp. (strain PCC 7120) GN=acsF1 PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 2.252e-42
Identity = 85/149 (57.05%), Postives = 112/149 (75.17%), Query Frame = 3
Query:  222 KTAIKETLLTPRFYTTDFDEMETLFNTEINKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFVTKARKYTF 668
            KT  KET+LTPRFYTTDF   ET  N +++ + N  E +A+L E + DYN+ HFVR++ F+++ + + G  RQ F+E+LERSC +EFSGFLL+KEL R+LK  +PV+AE+F LM+RDEARHAGFLNK + DF  +LDL  VTK R YTF
Sbjct:   11 KTPSKETVLTPRFYTTDF---ETAANLDLSAQEN--ELQAMLAEMRADYNRHHFVRDEAFEQSWEHIDGEARQAFIEYLERSCISEFSGFLLFKELSRKLKNRSPVLAEMFQLMARDEARHAGFLNKAMGDFKLSLDLATVTKTRTYTF 154          
BLAST of FC868539 vs. ExPASy Swiss-Prot
Match: ACSF2_THEEB (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase 2 OS=Thermosynechococcus elongatus (strain BP-1) GN=acsF2 PE=3 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 3.252e-41
Identity = 79/146 (54.11%), Postives = 107/146 (73.29%), Query Frame = 3
Query:  231 IKETLLTPRFYTTDFDEMETLFNTEINKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFVTKARKYTF 668
            I+E LLTPRFYTTDF++       +++    Q + EA+L E + DYN+ HFVR+  FK   D +    R+ F+++LERSC +EFSGFLL+KEL R+LK  NP++AEIF LM+RDEARHAGFLNK + DF +A+DLG+++K R YTF
Sbjct:   17 IRENLLTPRFYTTDFEQA-----AKLDLSRQQEQLEAMLAEMRADYNRHHFVRDDSFKGTWDLLDAQTRKAFIDYLERSCVSEFSGFLLFKELSRKLKDRNPLLAEIFHLMARDEARHAGFLNKAMMDFGHAMDLGYLSKTRTYTF 157          
BLAST of FC868539 vs. ExPASy Swiss-Prot
Match: ACSF_GLOVI (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase OS=Gloeobacter violaceus GN=acsF PE=3 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 2.753e-40
Identity = 81/145 (55.86%), Postives = 105/145 (72.41%), Query Frame = 3
Query:  234 KETLLTPRFYTTDFDEMETLFNTEINKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFVTKARKYTF 668
            +ETLLTPRFYTTDF+ +      +++    +A+FEALL EF+ DYN+ HF R+  F E A ++    R + +EFLERSCT+EFSGFLLYKE+ RRLK  NP++AE F  MSRDEARHAGFLNK + D++  LDL  + K +KYTF
Sbjct:   17 RETLLTPRFYTTDFEAL-----AKLDISAMEADFEALLAEFQADYNREHFQRDAGFVEQAHQIDPQWRALMLEFLERSCTSEFSGFLLYKEISRRLKAANPLLAECFKAMSRDEARHAGFLNKAMGDYDLGLDLSNLAKQKKYTF 156          
BLAST of FC868539 vs. ExPASy Swiss-Prot
Match: ACSF_BRASB (Aerobic magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=acsF PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 1.911e-33
Identity = 73/149 (48.99%), Postives = 104/149 (69.80%), Query Frame = 3
Query:  222 KTAIKETLLTPRFYTTDFDEMETLFNTEINKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFVTKARKYTF 668
            K A+++T+LTPRFYTTDF  M+ L     N  L + E++A++ E + D+N+ HFVR  EF++  +++   LR  F +FL  S TAEFSG +LY E+ +R+  TNP + E+FS MSRDEARHAGF+N+ L D    +DLGF+TK +KYT+
Sbjct:   14 KMALEDTILTPRFYTTDFAAMDRL-----NVDLVRREWDAVMAELRADHNRKHFVRTPEFEKDLNELPEALRLEFKDFLVSSLTAEFSGCVLYAEIKKRI--TNPDIRELFSYMSRDEARHAGFINEILKDHGIGVDLGFLTKVKKYTY 155          
BLAST of FC868539 vs. ExPASy Swiss-Prot
Match: ACSF_BRASO (Aerobic magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase OS=Bradyrhizobium sp. (strain ORS278) GN=acsF PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 5.560e-33
Identity = 72/149 (48.32%), Postives = 102/149 (68.46%), Query Frame = 3
Query:  222 KTAIKETLLTPRFYTTDFDEMETLFNTEINKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFVTKARKYTF 668
            K A+++T+LTPRFYTTDF  M+ L     N  L + E++A++ E + D+N+ HFVR  EF +  +++   LR  F +FL  S TAEFSG +LY E+ +R+  TNP + E+F  MSRDEARHAGF+N+ L D    +DLGF+TK +KYT+
Sbjct:   14 KMALEDTILTPRFYTTDFAAMDRL-----NVDLVRREWDAVMAELRADHNRKHFVRTPEFDKDLNELPEALRAEFKDFLVSSLTAEFSGCVLYAEIKKRI--TNPDIRELFQFMSRDEARHAGFINEILKDHGIGVDLGFLTKTKKYTY 155          
BLAST of FC868539 vs. ExPASy Swiss-Prot
Match: ACSF_RHOP2 (Aerobic magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase OS=Rhodopseudomonas palustris (strain HaA2) GN=acsF PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 3.051e-31
Identity = 70/148 (47.30%), Postives = 101/148 (68.24%), Query Frame = 3
Query:  228 AIKETLLTPRFYTTDFDEMETLFNTEINKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEA-ADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFVTKARKYTF 668
            A ++T+LTPRFYTTD+  M+ L     +  L ++E+  ++ E + DYN++HF +N EF E+  DK+   LR  F +FL  S TAEFSG +LY E+ +R+K  NP + E+F L+SRDEARHAGF+N+ L D    +DL F+TK +KYT+
Sbjct:   28 AKEDTILTPRFYTTDYAAMDKL-----DVSLVRSEWNVMMNEMRADYNKSHFKKNDEFLESDLDKLPPALRAEFKDFLVSSLTAEFSGCVLYAEIKKRIK--NPEIRELFGLLSRDEARHAGFINEILKDHGIGVDLSFLTKVKKYTY 168          
BLAST of FC868539 vs. ExPASy Swiss-Prot
Match: ACSF_RHOPT (Aerobic magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase OS=Rhodopseudomonas palustris (strain TIE-1) GN=acsF PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.159e-30
Identity = 70/148 (47.30%), Postives = 100/148 (67.57%), Query Frame = 3
Query:  228 AIKETLLTPRFYTTDFDEMETLFNTEINKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEA-ADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFVTKARKYTF 668
            A ++T+LTPRFYTTD+  M+ L     +  L +AE+ A++ E + DYN++HF +  EF  +  DK+   LR  F +FL  S TAEFSG +LY E+ +R+K  NP + E+F L+SRDEARHAGF+N+ L D    +DL F+TK +KYT+
Sbjct:   28 AKQDTILTPRFYTTDYAAMDKL-----DVSLVRAEWTAMMNELRADYNKSHFKKTDEFLNSDLDKLPPELRAEFKDFLVSSLTAEFSGCVLYAEIKKRIK--NPEIRELFGLLSRDEARHAGFINEILKDHGIGVDLSFLTKVKKYTY 168          
BLAST of FC868539 vs. ExPASy Swiss-Prot
Match: ACSF_RHOPA (Aerobic magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase OS=Rhodopseudomonas palustris GN=acsF PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.159e-30
Identity = 70/148 (47.30%), Postives = 100/148 (67.57%), Query Frame = 3
Query:  228 AIKETLLTPRFYTTDFDEMETLFNTEINKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEA-ADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFVTKARKYTF 668
            A ++T+LTPRFYTTD+  M+ L     +  L +AE+ A++ E + DYN++HF +  EF  +  DK+   LR  F +FL  S TAEFSG +LY E+ +R+K  NP + E+F L+SRDEARHAGF+N+ L D    +DL F+TK +KYT+
Sbjct:   28 AKQDTILTPRFYTTDYAAMDKL-----DVSLVRAEWTAMMNELRADYNKSHFKKTDEFVNSDLDKLPPELRAEFKDFLVSSLTAEFSGCVLYAEIKKRIK--NPEIRELFGLLSRDEARHAGFINEILKDHGIGVDLSFLTKVKKYTY 168          
BLAST of FC868539 vs. ExPASy Swiss-Prot
Match: ACSF_RHOPS (Aerobic magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase OS=Rhodopseudomonas palustris (strain BisB5) GN=acsF PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 5.754e-30
Identity = 69/148 (46.62%), Postives = 99/148 (66.89%), Query Frame = 3
Query:  228 AIKETLLTPRFYTTDFDEMETLFNTEINKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEA-ADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFVTKARKYTF 668
            A ++T+LTPRFYTTD+  M+ L     +  L ++E+ A++ E + DYN+ HF +  EF E+  DK+   L   F +FL  S TAEFSG +LY E+ +R+K  NP + E+F L+SRDEARHAGF+N+ L D    +DL F+TK +KYT+
Sbjct:   30 AKEDTILTPRFYTTDYAAMDKL-----DVSLVRSEWNAMMNEMRADYNKAHFKKTDEFLESDLDKLPPELLIEFKDFLVSSLTAEFSGCVLYSEIKKRIK--NPEIRELFGLLSRDEARHAGFINEILKDHGIGVDLSFLTKVKKYTY 170          
BLAST of FC868539 vs. ExPASy Swiss-Prot
Match: ACSF_RHOGE (Aerobic magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase OS=Rhodocyclus gelatinosus GN=acsF PE=3 SV=2)

HSP 1 Score: 109.383 bits (272), Expect = 1.793e-23
Identity = 61/153 (39.87%), Postives = 97/153 (63.40%), Query Frame = 3
Query:  222 KTAIKETLLTPRFYTTDFDEMETLFNTEINKKLNQAEFEALLQEFKTDYNQTHFVRNKEF-KEAADK---MQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFVTKARKYTF 668
            + A + TLL+PRFYTTD+  M  +  + I     +AE++A+L E++ D N  HF R  EF +E A++   +   LRQ F++FL  S T+EFSG +LY E+ + ++  NP V  +   M+R+E+RHAGF+N+ L DF   ++LG + + + YT+
Sbjct:   15 RRAKESTLLSPRFYTTDYAAMNAIDVSSI-----RAEWDAMLAEYEGDNNHDHFQRTPEFAQEVAERFSQVSPELRQEFLDFLVSSVTSEFSGCVLYNEIQKNVE--NPDVKALMRYMARNESRHAGFINQALRDFGLGINLGGLKRTKAYTY 160          
The following BLAST results are available for this feature:
BLAST of FC868539 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
ACSF1_ANASP2.252e-4257.05Magnesium-protoporphyrin IX monomethyl ester [oxid... [more]
ACSF2_THEEB3.252e-4154.11Magnesium-protoporphyrin IX monomethyl ester [oxid... [more]
ACSF_GLOVI2.753e-4055.86Magnesium-protoporphyrin IX monomethyl ester [oxid... [more]
ACSF_BRASB1.911e-3348.99Aerobic magnesium-protoporphyrin IX monomethyl est... [more]
ACSF_BRASO5.560e-3348.32Aerobic magnesium-protoporphyrin IX monomethyl est... [more]
ACSF_RHOP23.051e-3147.30Aerobic magnesium-protoporphyrin IX monomethyl est... [more]
ACSF_RHOPT1.159e-3047.30Aerobic magnesium-protoporphyrin IX monomethyl est... [more]
ACSF_RHOPA1.159e-3047.30Aerobic magnesium-protoporphyrin IX monomethyl est... [more]
ACSF_RHOPS5.754e-3046.62Aerobic magnesium-protoporphyrin IX monomethyl est... [more]
ACSF_RHOGE1.793e-2339.87Aerobic magnesium-protoporphyrin IX monomethyl est... [more]

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Properties
Property NameValue
Genbank descriptionC31001F08EF AbioticL1 Citrus clementina cDNA clone C31001F08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868539 ID=FC868539; Name=FC868539; organism=Citrus clementina; type=EST; length=676bp
ACTCTCTAGTTCCTCCCCTGGTTCCAGAAATGGCAGCTGAGATGGCACTG
GTCAAACCGATTAGCAAATTCAGCACCATCGCCACCACTACTAAGCCTAG
GTTCAGCTACCCGAAAGCAACATGTACATCTCTGAGCACAAGATTTTGTA
CAATCAAAATGTCAGCAACTTCAGAGCAAGCGGCTGCTGCCACTGCCCAA
AAGCCAAGCAAGAAATCAAACAAAACTGCTATCAAGGAGACCCTTCTGAC
ACCAAGGTTTTATACAACAGATTTTGATGAAATGGAGACCCTTTTCAACA
CTGAGATCAACAAGAAGCTCAACCAGGCTGAATTTGAGGCATTGCTTCAA
GAATTCAAGACTGATTATAACCAGACTCACTTTGTGAGGAACAAGGAGTT
CAAGGAAGCTGCTGACAAGATGCAAGGCCCTCTCAGGCAGATCTTTGTTG
AGTTCTTGGAGAGGTCTTGCACTGCTGAGTTCTCTGGTTTCCTTCTTTAC
AAAGAGCTCGGAAGGAGACTCAAGAAAACCAACCCAGTGGTAGCTGAGAT
TTTCTCTCTGATGTCCAGGGATGAAGCCAGGCATGCCGGGTTTCTGAACA
AGGGGCTATCTGATTTCAATTATGCATTGGACTTGGGCTTCGTGACNAAA
GCTAGGAAATACACATTTGTCAGCCA
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