FC868542
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC868542 vs. ExPASy Swiss-Prot
Match: YME1_SCHPO (Protein YME1 homolog OS=Schizosaccharomyces pombe GN=SPCC965.04c PE=2 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.261e-32 Identity = 80/218 (36.70%), Postives = 119/218 (54.59%), Query Frame = 2 Query: 20 QTLNQLLTEMDGFEGNTG----IIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGXXXXXXXXXXXXXXGRRGKAAISSKEIDDSIDRIVAGME-GTVMTDGKSKSLVAYHEVGHAICGTLTPGHDPVQKVTLVPRGQARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFGGPEVT 658 QTLNQLL ++DGF N ++ I ATN + LD AL RPGRFDR + V +PD+RGR IL H + DV L +IA T GF+G + A+S ++++ S DRI+ G E + ++K + AYHE GHA+ T K T++PRG + G+T +P D ++++ A + +GGRAAEE+++G ++T Sbjct: 385 QTLNQLLVDLDGFSKNEDLAHPVVFIGATNFPESLDPALTRPGRFDRHIHVPLPDVRGRLAILLQHTRHVPLGKDVDLSIIARGTSGFAGADLANLINQAAVYASKNLSTAVSMRDLEWSKDRILMGAERKSAFITPENKLMTAYHEGGHALVALFTKNAMRPYKATIMPRGSSLGMTISLPDMDKDSWTREEYLAMLDVTMGGRAAEELLYGKDKIT 602
BLAST of FC868542 vs. ExPASy Swiss-Prot
Match: SPG7_RAT (Paraplegin OS=Rattus norvegicus GN=Spg7 PE=2 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.884e-28 Identity = 85/215 (39.53%), Postives = 111/215 (51.63%), Query Frame = 2 Query: 5 NDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSL--DVIAMRTPGFSGXXXXXXXXXXXXXXGRRGKAAISSKEIDDSIDRIVAGMEGTVMTDGKSKSLVAYHEVGHAICGTLTPGHDPVQKVTLVPR-GQARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIF 640 N E EQTLNQLL EMDG +IV+A+TNRAD+LD+AL+RPGR DR V +D+P ++ R EI + H K S +A TPGFSG K+ I SKE + +VA+HE GHA+ G L + V KV++ PR A G + +P D L +K+QLF R+ LGGRAAE + F Sbjct: 426 NTEEEQTLNQLLVEMDGMGTADHVIVLASTNRADVLDNALMRPGRLDRHVFIDLPTLQERREIFEQHLKGLKLTQPSSFYSQRLAELTPGFSGTAK---------------KSKILSKE---------------------EQRVVAFHESGHALVGWLLEHTEAVMKVSIAPRTNAALGFSQMLPRDQ-YLFTKEQLFERMCMALGGRAAEAISF 603
BLAST of FC868542 vs. ExPASy Swiss-Prot
Match: PSMR_AERPE (Proteasome-activating nucleotidase OS=Aeropyrum pernix GN=pan PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.914e-21 Identity = 53/131 (40.46%), Postives = 78/131 (59.54%), Query Frame = 2 Query: 2 GNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGXXXXXXXXXXXXXXGRRGKAAISSKEIDDSIDRIVAGME 394 G+ E ++T+ QLL E+DGF+ + VIAATNR D++D A+LRPGRFDR + V +P +RGR EIL +H K DV L+ IA T GFSG RRG I+ ++ +++++ A ++ Sbjct: 255 GDREVQRTMLQLLAELDGFDPLDNVKVIAATNRLDLIDPAVLRPGRFDRIIEVPLPSLRGRLEILGIHTRKAKMAPDVDLEAIAKLTEGFSGADLKAVVVEAGYNAIRRGSRVITMDDMIKAVEKVKAALD 385
BLAST of FC868542 vs. ExPASy Swiss-Prot
Match: FTSHC_ARATH (Cell division protease ftsH homolog 12, chloroplastic OS=Arabidopsis thaliana GN=FTSH12 PE=2 SV=2) HSP 1 Score: 100.908 bits (250), Expect = 6.491e-21 Identity = 69/233 (29.61%), Postives = 107/233 (45.92%), Query Frame = 2 Query: 14 REQTLNQLLTEMDGFEGNTGI---------IVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGXXXXXXXXXXXXXXGRRGKAAISSKEIDDSIDRIVAGMEGTVMTDG-----------KSKSLVAYHEVGHAICGTLTPGHDPVQKVTLVPRGQARGLTWFIPSDDPT---LISKQQLFARIVGGLGGRAAEEVIFG 643 R T L+ ++DG + TGI I I ATNR D LD +R GR DR++ + +PD + R +I VH + K D+ + RT GFSG R+G++ I ++I D +D+ + G ++T+ + K L+A HE GH + L P D L+P G+ ++ F P +D + + ++V GGR AE V+FG Sbjct: 607 RRATFEALIAQLDGEKEKTGIDRFSLRQAVIFICATNRPDELDLEFVRSGRIDRRLYIGLPDAKQRVQIFGVHSAGKNLAEDIDFGKLVFRTVGFSGADIRNLVNEAAIMSVRKGRSYIYQQDIVDVLDKQLLEGMGVLLTEEEQQKCEQSVSYEKKRLLAVHEAGHIVLAHLFPRFDWHAFSQLLPGGKETAVSVFYPREDMVDQGYTTFGYMKMQMVVAHGGRCAERVVFG 839
BLAST of FC868542 vs. ExPASy Swiss-Prot
Match: PSMR_SULIY (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=pan PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 8.478e-21 Identity = 52/126 (41.27%), Postives = 77/126 (61.11%), Query Frame = 2 Query: 2 GNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGXXXXXXXXXXXXXXGRRGKAAISSKEIDDSIDRI 379 G E ++TL QLL E+DGF + +IAATNR DILD ALLRPGRFDR + V +PD RGRTEI ++ K + +++L++++ + GFSG R G+ ++ K++ D+I +I Sbjct: 250 GEREIQRTLMQLLAELDGFNPLDNVKIIAATNRIDILDPALLRPGRFDRIIEVPLPDFRGRTEIFNIYLKKMKVEDNINLELLSQLSEGFSGADIKNVCVEAAYMAIRDGRNKVTMKDLVDAITKI 375
BLAST of FC868542 vs. ExPASy Swiss-Prot
Match: PSMR_SULIM (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=pan PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 8.478e-21 Identity = 52/126 (41.27%), Postives = 77/126 (61.11%), Query Frame = 2 Query: 2 GNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGXXXXXXXXXXXXXXGRRGKAAISSKEIDDSIDRI 379 G E ++TL QLL E+DGF + +IAATNR DILD ALLRPGRFDR + V +PD RGRTEI ++ K + +++L++++ + GFSG R G+ ++ K++ D+I +I Sbjct: 250 GEREIQRTLMQLLAELDGFNPLDNVKIIAATNRIDILDPALLRPGRFDRIIEVPLPDFRGRTEIFNIYLKKMKVEDNINLELLSQLSEGFSGADIKNVCVEAAYMAIRDGRNKVTMKDLVDAITKI 375
BLAST of FC868542 vs. ExPASy Swiss-Prot
Match: PSMR_SULIL (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=pan PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 8.478e-21 Identity = 52/126 (41.27%), Postives = 77/126 (61.11%), Query Frame = 2 Query: 2 GNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGXXXXXXXXXXXXXXGRRGKAAISSKEIDDSIDRI 379 G E ++TL QLL E+DGF + +IAATNR DILD ALLRPGRFDR + V +PD RGRTEI ++ K + +++L++++ + GFSG R G+ ++ K++ D+I +I Sbjct: 250 GEREIQRTLMQLLAELDGFNPLDNVKIIAATNRIDILDPALLRPGRFDRIIEVPLPDFRGRTEIFNIYLKKMKVEDNINLELLSQLSEGFSGADIKNVCVEAAYMAIRDGRNKVTMKDLVDAITKI 375
BLAST of FC868542 vs. ExPASy Swiss-Prot
Match: PSMR_SULIK (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=pan PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 8.478e-21 Identity = 52/126 (41.27%), Postives = 77/126 (61.11%), Query Frame = 2 Query: 2 GNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGXXXXXXXXXXXXXXGRRGKAAISSKEIDDSIDRI 379 G E ++TL QLL E+DGF + +IAATNR DILD ALLRPGRFDR + V +PD RGRTEI ++ K + +++L++++ + GFSG R G+ ++ K++ D+I +I Sbjct: 250 GEREIQRTLMQLLAELDGFNPLDNVKIIAATNRIDILDPALLRPGRFDRIIEVPLPDFRGRTEIFNIYLKKMKVEDNINLELLSQLSEGFSGADIKNVCVEAAYMAIRDGRNKVTMKDLVDAITKI 375
BLAST of FC868542 vs. ExPASy Swiss-Prot
Match: PSMR_SULIA (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain M.16.27) GN=pan PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 8.478e-21 Identity = 52/126 (41.27%), Postives = 77/126 (61.11%), Query Frame = 2 Query: 2 GNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGXXXXXXXXXXXXXXGRRGKAAISSKEIDDSIDRI 379 G E ++TL QLL E+DGF + +IAATNR DILD ALLRPGRFDR + V +PD RGRTEI ++ K + +++L++++ + GFSG R G+ ++ K++ D+I +I Sbjct: 250 GEREIQRTLMQLLAELDGFNPLDNVKIIAATNRIDILDPALLRPGRFDRIIEVPLPDFRGRTEIFNIYLKKMKVEDNINLELLSQLSEGFSGADIKNVCVEAAYMAIRDGRNKVTMKDLVDAITKI 375
BLAST of FC868542 vs. ExPASy Swiss-Prot
Match: PSMR_SULSO (Proteasome-activating nucleotidase OS=Sulfolobus solfataricus GN=pan PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.889e-20 Identity = 50/126 (39.68%), Postives = 78/126 (61.90%), Query Frame = 2 Query: 2 GNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGXXXXXXXXXXXXXXGRRGKAAISSKEIDDSIDRI 379 G E ++TL QLL E+DGF+ + +IAATNR DILD ALLRPGRFDR + V +PD +GRTEI ++ K + +++L++++ T GFSG R G+ ++ ++ ++I++I Sbjct: 250 GEREIQRTLMQLLAELDGFDPLDNVKIIAATNRIDILDPALLRPGRFDRIIEVPLPDFKGRTEIFNIYLKKMKIEDNINLELLSQLTEGFSGADIKNVCVEAAYMAIRDGRNKVTMNDLVEAINKI 375 The following BLAST results are available for this feature:
BLAST of FC868542 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 256
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868542 ID=FC868542; Name=FC868542; organism=Citrus clementina; type=EST; length=681bpback to top |