FC868546
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC868546 vs. ExPASy Swiss-Prot
Match: GLGA_SALAR (Glycogen synthase OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=glgA PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 6.888e-11 Identity = 47/138 (34.06%), Postives = 67/138 (48.55%), Query Frame = 1 Query: 97 YQDNQLRFIVLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKAMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQE 510 Y DN LRF +L E L+ P+ V A+DWH L P YL A +P AK VF +HN+AYQG F + + LP + F + + G +I+++KAG+ +D + VSP YA+E Sbjct: 103 YTDNVLRFALLGWVGCEMACGLD---------PFWRPDVVHAHDWHAGLAPAYLAARGRP------AKSVFTVHNLAYQGMFYAKHIDDIELP------WSFFNMHGLEFNG-QISFLKAGLYYADHITAVSPTYARE 218
BLAST of FC868546 vs. ExPASy Swiss-Prot
Match: GLGA_CLOK5 (Glycogen synthase OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=glgA PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 6.888e-11 Identity = 48/152 (31.58%), Postives = 69/152 (45.39%), Query Frame = 1 Query: 97 YQDNQLRFIVLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKAMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQETVSGEDXGVELDNI 552 Y D+ RF +A L+ +N Y D++ NDWHT +IP K YK Y+ K VF IHN+ +QG F G L F + + + G +++MK+GI SD + TVS YA E + + G LD + Sbjct: 101 YYDDGERFAFFDRAVLDMLWQIN----------YKPDIIH-CNDWHTGMIPVLYKIQYKQSSFYRGVKFVFSIHNLLFQGNFDKNILGEL-----FNLDGSLYENGSVELNG-AVSFMKSGINYSDKISTVSRSYAFE-IQSPEYGENLDGL 234
BLAST of FC868546 vs. ExPASy Swiss-Prot
Match: GLGA_CLOK1 (Glycogen synthase OS=Clostridium kluyveri (strain NBRC 12016) GN=glgA PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 6.888e-11 Identity = 48/152 (31.58%), Postives = 69/152 (45.39%), Query Frame = 1 Query: 97 YQDNQLRFIVLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKAMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQETVSGEDXGVELDNI 552 Y D+ RF +A L+ +N Y D++ NDWHT +IP K YK Y+ K VF IHN+ +QG F G L F + + + G +++MK+GI SD + TVS YA E + + G LD + Sbjct: 101 YYDDGERFAFFDRAVLDMLWQIN----------YKPDIIH-CNDWHTGMIPVLYKIQYKQSSFYRGVKFVFSIHNLLFQGNFDKNILGEL-----FNLDGSLYENGSVELNG-AVSFMKSGINYSDKISTVSRSYAFE-IQSPEYGENLDGL 234
BLAST of FC868546 vs. ExPASy Swiss-Prot
Match: GLGA_BACLD (Glycogen synthase OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=glgA PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 6.888e-11 Identity = 51/171 (29.82%), Postives = 75/171 (43.86%), Query Frame = 1 Query: 16 FVDHPRFLAKVWGKTQSKIYGPRTGEDYQDNQLRFIVLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKAMYKPKGMYKSAKVVFCIHNIAYQGRF---AFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQETVS 519 F+DH + + +YG + D+ RF +A LEA LN ++ V +DWHT ++ LK Y+ K Y+ K VF IHN+ +QG F A D L++ +F IN+MK GI+ +D V TVSP Y E ++ Sbjct: 86 FLDHGYYF------NRDSLYG------HYDDGERFAFFSRAVLEALYALNFEAD-----------VIHTHDWHTGMVNYLLKEEYRKKPFYQHMKSVFTIHNLQFQGIFPKEAVHDLLGLDISHFTTEKLEFYG---------NINYMKGGIIAADQVTTVSPTYRDEILT 224
BLAST of FC868546 vs. ExPASy Swiss-Prot
Match: GLGA_MAGSA (Glycogen synthase OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=glgA PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 8.996e-11 Identity = 54/166 (32.53%), Postives = 76/166 (45.78%), Query Frame = 1 Query: 19 VDHPRFLAKVWGKTQSKIYGPRTGEDYQDNQLRFIVLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKAMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKS--SFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQE 510 VD P + G Q G D+ DN LRF +L + A + NS + V ANDW T L P YL A + P + VF IHNIAYQG+F + L P + + F++ D ++++K+G+ SD + TVSP YA+E Sbjct: 87 VDCPALFERAGGPYQDP-----QGRDWPDNALRFALL---SWTAAHLCTENSPVKW-----RPQVLHANDWQTGLAPAYLHA-WSPA---QRPATVFTIHNIAYQGQFPRDLVPRLGFPPEMYAMDGFEYYD---------TLSFLKSGLFYSDRITTVSPRYAKE 226 The following BLAST results are available for this feature:
BLAST of FC868546 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 135
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868546 ID=FC868546; Name=FC868546; organism=Citrus clementina; type=EST; length=552bpback to top |