FC868554

Overview
NameFC868554
Unique NameFC868554
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length666
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9492 contig Ccv1_Contig9492:111..776. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC868554 vs. ExPASy Swiss-Prot
Match: PER2_ARAHY (Cationic peroxidase 2 OS=Arachis hypogaea GN=PNC2 PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 2.196e-34
Identity = 82/208 (39.42%), Postives = 116/208 (55.77%), Query Frame = 2
Query:   41 GLVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCP 649
            G  + FY  TCP+AE I++  V+         A   LR  FHDC VQ CD S+L+       +EK    + G+R +  I++ K  +E  CPGVVSCADIL L+ RD VV  GG    + TGRRDGR S+A  +   LP  +DS+ V  ++FAA G++   LV L+G H++G + C    +RL+        DPA++P  V ++   CP
Sbjct:   31 GTRVGFYSRTCPRAESIVRSTVRSHVNSDPTLAAKILRMHFHDCFVQGCDGSILISGPA---TEKTAFANLGLRGYEIIDDAKTQLEAACPGVVSCADILALAARDSVVLSGGLSWQVPTGRRDGRVSQASDVSN-LPAPSDSVDVQKQKFAAKGLNTQDLVTLVGGHTIGTSECQFFSNRLFNFNGTAAADPAIDPSFVSNLQALCP 234          
BLAST of FC868554 vs. ExPASy Swiss-Prot
Match: PER3_ARATH (Peroxidase 3 OS=Arabidopsis thaliana GN=PER3 PE=1 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 2.869e-34
Identity = 80/208 (38.46%), Postives = 121/208 (58.17%), Query Frame = 2
Query:   44 LVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEV-----DPALNPDHVPHM-LHKCP 649
            L MNFY ++CP AE I+++ V        + A + +R  FHDC V+ CD S+L++ST    +E++   +  +R F +I+ IK  +E +CPG+VSCADI+ L+ RD VV  GGP   + TGRRDGR S A      +P    +++ +   FA  G+D   LV L G+H++G +HC    +RLY        DPAL+ ++  ++   KCP
Sbjct:   26 LQMNFYANSCPNAEKIVQDFVSNHVSNAPSLAAALIRMHFHDCFVRGCDGSVLINSTSGN-AERDATPNLTVRGFGFIDAIKSVLEAQCPGIVSCADIIALASRDAVVFTGGPNWSVPTGRRDGRISNAAEALANIPPPTSNITNLQTLFANQGLDLKDLVLLSGAHTIGVSHCSSFTNRLYNFTGRGGQDPALDSEYAANLKSRKCP 232          
BLAST of FC868554 vs. ExPASy Swiss-Prot
Match: PER41_ARATH (Peroxidase 41 OS=Arabidopsis thaliana GN=PER41 PE=2 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 3.747e-34
Identity = 77/194 (39.69%), Postives = 113/194 (58.25%), Query Frame = 2
Query:   38 PGLVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLL--DSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALN 613
            P L  ++Y+ TCP    I++E V     +   TA   LR  FHDC ++ CDAS+L+  +S  K   + +++ S     F  +  IK A+E  CPGVVSCADIL  + RD V  +GGP+  +K GR+DG +S+A  ++  LP  N S+  +L  F   G     LVAL G H++G +HC +  +R++P+VDP LN
Sbjct:   24 PNLTKDYYQKTCPDFNKIVRETVTPKQGQQPTTAAGTLRLFFHDCFMEGCDASVLIATNSFNKAERDDDLNESLPGDAFDIVTRIKTALELSCPGVVSCADILAQATRDLVTMVGGPFYEVKLGRKDGFESKAHKVKGNLPLANQSVPDMLSIFKKNGFTLKELVALSGGHTIGFSHCKEFSNRIFPKVDPELN 217          
BLAST of FC868554 vs. ExPASy Swiss-Prot
Match: PER27_ARATH (Peroxidase 27 OS=Arabidopsis thaliana GN=PER27 PE=1 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 3.747e-34
Identity = 83/215 (38.60%), Postives = 118/215 (54.88%), Query Frame = 2
Query:   17 LASNEEDPGLVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKC 646
            L +     GL + FY  TCPQ E I+K+ V     +        LR  FHDC V+ CD S+LLD       EK    +  +R F  I++ K A+E+ CPG+VSC+DIL L  RD +VAL GP   ++TGRRDGR S   I E  LP   D+++ ++  F + G++   LV L G H++G  HC  L +RLY      + DP+L+ ++   +  KC
Sbjct:   17 LFAQANSQGLKVGFYSKTCPQLEGIVKKVVFDAMNKAPTLGAPLLRMFFHDCFVRGCDGSVLLDKPNNQ-GEKSAVPNLSLRGFGIIDDSKAALEKVCPGIVSCSDILALVARDAMVALEGPSWEVETGRRDGRVS--NINEVNLPSPFDNITKLISDFRSKGLNEKDLVILSGGHTIGMGHCPLLTNRLYNFTGKGDSDPSLDSEYAAKLRKKC 228          
BLAST of FC868554 vs. ExPASy Swiss-Prot
Match: PER1_ARATH (Peroxidase 1/2 OS=Arabidopsis thaliana GN=PER1 PE=1 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 4.893e-34
Identity = 74/207 (35.75%), Postives = 117/207 (56.52%), Query Frame = 2
Query:   44 LVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCP 649
            L +++Y+  CP+AE+I++        R K  A   LR  FHDC V+ CD S+LL S +   +E++   +  ++ +  ++  K A+ER+CP ++SCAD+L L  RD V  +GGP+ P+  GRRDGR S+       LP     +  + + FA  G++A  LV L G H++G + C  +  RLY      + DP++NP +V  +  KCP
Sbjct:   26 LDLDYYRSKCPKAEEIVRGVTVQYVSRQKTLAAKLLRMHFHDCFVRGCDGSVLLKSAKND-AERDAVPNLTLKGYEVVDAAKTALERKCPNLISCADVLALVARDAVAVIGGPWWPVPLGRRDGRISKLNDALLNLPSPFADIKTLKKNFANKGLNAKDLVVLSGGHTIGISSCALVNSRLYNFTGKGDSDPSMNPSYVRELKRKCP 231          
BLAST of FC868554 vs. ExPASy Swiss-Prot
Match: PER66_ARATH (Peroxidase 66 OS=Arabidopsis thaliana GN=PER66 PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.090e-33
Identity = 77/210 (36.67%), Postives = 115/210 (54.76%), Query Frame = 2
Query:   35 DPGLVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRL-----YPEVDPALNPDHVPHMLHKCP 649
            +  L  ++Y  +CP AE II E V+             LR  FHDC ++ CDAS+LLDSTR   +EK+   +  +R+F  IE+ K  +E+ CP  VSCAD++ ++ RD V   GGPY  +  GR+DG  SRA      LP    ++S +++ FAA G+    +V L G H++G +HC     RL     + ++DP++N      +  KCP
Sbjct:   23 EAALDAHYYDQSCPAAEKIILETVRNATLYDPKVPARLLRMFFHDCFIRGCDASILLDSTRSNQAEKDGPPNISVRSFYVIEDAKRKLEKACPRTVSCADVIAIAARDVVTLSGGPYWSVLKGRKDGTISRANETRN-LPPPTFNVSQLIQSFAARGLSVKDMVTLSGGHTIGFSHCSSFESRLQNFSKFHDIDPSMNYAFAQTLKKKCP 231          
BLAST of FC868554 vs. ExPASy Swiss-Prot
Match: PER26_ARATH (Probable peroxidase 26 OS=Arabidopsis thaliana GN=PER26 PE=2 SV=2)

HSP 1 Score: 143.28 bits (360), Expect = 1.090e-33
Identity = 83/209 (39.71%), Postives = 119/209 (56.94%), Query Frame = 2
Query:   44 LVMNFYK--DTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCP 649
            L  ++YK  +TC  AE+ ++ QV++ YK  K+ A   LR ++ DC V  CDAS+LL+      SEK   ++ G+  F  I+ IK  +E+ CPGVVSCADIL L+ RD V   G P  P+ TGRRDG  S  + ++  LP  + S    +  F + G++   +  LLGSHS+GRTHC  +V RLY      +  P +N   +  M  +CP
Sbjct:   35 LTWHYYKVYNTCENAENFVRHQVEIFYKNDKSIAPKLLRLLYSDCFVSGCDASVLLEGPN---SEKMAPQNRGLGGFVLIDKIKIVLEQRCPGVVSCADILNLATRDAVHLAGAPSYPVFTGRRDGLTSDKQTVD--LPSPSISWDQAMSYFKSRGLNVLDMATLLGSHSMGRTHCSYVVDRLYNYNKTGKPSPTMNKYFLSEMAKQCP 238          
BLAST of FC868554 vs. ExPASy Swiss-Prot
Match: PER4_VITVI (Peroxidase 4 OS=Vitis vinifera GN=GSVIVT00023967001 PE=1 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.424e-33
Identity = 75/197 (38.07%), Postives = 105/197 (53.30%), Query Frame = 2
Query:   14 ALASNEEDPGLVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKE-MDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVD 601
            AL +      L  NFY  TCP+  D +K  V+    + +    S LR  FHDC V  CDAS+LLD T     E+  +     +R    I+NIK  VE  CPGVVSCADI+ ++ RD VV LGGP   +K GRRD + +        +P    S+S ++ +F A G+    +VAL G+H++G+  C     R+Y E +
Sbjct:   17 ALFAGSSSAQLSTNFYSKTCPKVFDTVKSGVQSAVSKERRMGASLLRLFFHDCFVNGCDASVLLDDTSSFTGEQTAVPNKNSIRGLNVIDNIKSQVESVCPGVVSCADIIAIAARDSVVILGGPDWDVKLGRRDSKTASLSGANNNIPPPTSSLSNLISKFQAQGLSTRDMVALSGAHTIGQARCTSFRARIYNETN 213          
BLAST of FC868554 vs. ExPASy Swiss-Prot
Match: PER36_ARATH (Peroxidase 36 OS=Arabidopsis thaliana GN=PER36 PE=2 SV=2)

HSP 1 Score: 142.51 bits (358), Expect = 1.859e-33
Identity = 80/204 (39.22%), Postives = 110/204 (53.92%), Query Frame = 2
Query:   56 FYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSF-GMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCP 649
            FY+++CP A+ I++  V   Y      A S LR  FHDC V  CDAS+LLDS+    SEK  + +    R F  I+ IK A+E ECP  VSCAD+L L  RD +V  GGP   +  GRRD R++      + +P    ++  +L  F   G+D   LVALLGSH++G + C+    RLY      + D  LN D+   +   CP
Sbjct:   45 FYENSCPNAQAIVQSYVANAYFNDPRMAASILRLHFHDCFVNGCDASVLLDSSGTMESEKRSNANRDSARGFEVIDEIKSALENECPETVSCADLLALVARDSIVICGGPSWEVYLGRRDAREASLIGSMENIPSPESTLQTILTMFNFQGLDLTDLVALLGSHTIGNSRCIGFRQRLYNHTGNNDPDQTLNQDYASMLQQGCP 248          
BLAST of FC868554 vs. ExPASy Swiss-Prot
Match: PER49_ARATH (Peroxidase 49 OS=Arabidopsis thaliana GN=PER49 PE=2 SV=2)

HSP 1 Score: 142.124 bits (357), Expect = 2.428e-33
Identity = 77/208 (37.02%), Postives = 108/208 (51.92%), Query Frame = 2
Query:   44 LVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMD-RSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPE-----VDPALNPDHVPHMLHKCP 649
            L   +Y  +CPQ  +I++  V     R    A S LR  FHDC VQ CD SLLLDS+ +  +EK  +  S   R F  ++ IK  +E++CPG VSCAD+L L+ RD  V  GGP   +  GRRD R +        +P  N++   +L +F   G+D   LVAL GSH++G + C     RLY +      D  L      ++  +CP
Sbjct:   30 LFPGYYAHSCPQVNEIVRSVVAKAVARETRMAASLLRLHFHDCFVQGCDGSLLLDSSGRVATEKNSNPNSKSARGFDVVDQIKAELEKQCPGTVSCADVLTLAARDSSVLTGGPSWVVPLGRRDSRSASLSQSNNNIPAPNNTFQTILSKFNRQGLDITDLVALSGSHTIGFSRCTSFRQRLYNQSGNGSPDMTLEQSFAANLRQRCP 237          
The following BLAST results are available for this feature:
BLAST of FC868554 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
PER2_ARAHY2.196e-3439.42Cationic peroxidase 2 OS=Arachis hypogaea GN=PNC2 ... [more]
PER3_ARATH2.869e-3438.46Peroxidase 3 OS=Arabidopsis thaliana GN=PER3 PE=1 ... [more]
PER41_ARATH3.747e-3439.69Peroxidase 41 OS=Arabidopsis thaliana GN=PER41 PE=... [more]
PER27_ARATH3.747e-3438.60Peroxidase 27 OS=Arabidopsis thaliana GN=PER27 PE=... [more]
PER1_ARATH4.893e-3435.75Peroxidase 1/2 OS=Arabidopsis thaliana GN=PER1 PE=... [more]
PER66_ARATH1.090e-3336.67Peroxidase 66 OS=Arabidopsis thaliana GN=PER66 PE=... [more]
PER26_ARATH1.090e-3339.71Probable peroxidase 26 OS=Arabidopsis thaliana GN=... [more]
PER4_VITVI1.424e-3338.07Peroxidase 4 OS=Vitis vinifera GN=GSVIVT0002396700... [more]
PER36_ARATH1.859e-3339.22Peroxidase 36 OS=Arabidopsis thaliana GN=PER36 PE=... [more]
PER49_ARATH2.428e-3337.02Peroxidase 49 OS=Arabidopsis thaliana GN=PER49 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC31001H01EF AbioticL1 Citrus clementina cDNA clone C31001H01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868554 ID=FC868554; Name=FC868554; organism=Citrus clementina; type=EST; length=666bp
GTCTCTGAGGTCTGCTTTGGCATCAAATGAAGAGGACCCAGGTCTTGTTA
TGAATTTTTACAAGGATACATGCCCTCAGGCCGAGGACATTATCAAGGAA
CAAGTTAAGCTTCTGTACAAGCGCCACAAGAACACTGCATTTTCTTGGCT
TAGAAACATTTTCCATGACTGTGCTGTCCAGTCTTGTGATGCTTCACTGC
TTCTGGACTCGACAAGAAAGACCTTGTCTGAGAAGGAAATGGACAGGAGC
TTTGGTATGAGGAACTTCAGGTACATTGAGAACATCAAAGAAGCTGTTGA
AAGAGAGTGCCCTGGTGTTGTTTCCTGTGCTGATATTCTTGTCCTGTCCG
GTAGAGATGGCGTTGTTGCGCTTGGAGGCCCTTACATTCCTCTCAAGACA
GGAAGAAGAGATGGTAGAAAAAGCAGAGCAGAGATACTTGAGCAGTATCT
CCCAGATCACAATGACAGCATGTCTGTTGTTCTTGAGAGGTTTGCAGCCA
TTGGCATTGACGCCCCTGGACTTGTTGCTCTGCTAGGATCTCACAGTGTT
GGCAGAACTCATTGTGTGAAGCTGGTGCACCGTCTGTACCCAGAAGTTGA
CCCTGCACTGAACCCTGACCACGTTCCGCATATGCTCCATAAGTGTCCTG
ATGCAATCCCAGACCC
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