FC868560
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868560 vs. ExPASy Swiss-Prot
Match: TDH_RHISN (L-threonine 3-dehydrogenase OS=Rhizobium sp. (strain NGR234) GN=tdh PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.204e-25 Identity = 71/194 (36.60%), Postives = 109/194 (56.19%), Query Frame = 1 Query: 118 LKIQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLG-SPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLGARAFGAPRIVIVDVDDYRLSV 696 L ++ + +P +GP DVL+R+K +CG+DVH + A + PMV+GHE G I +VGS V G+RV+ E I C +C C+ GR +LC + G+G + P G A V P +PD+V E A+ +P VH ++ E +VL+ G+GPIG++ L A+ GA ++VI D++ RL + Sbjct: 17 LWMERVPVPEVGPNDVLIRVKKSAICGTDVHIWNWDQWAQKTIPVPMVVGHEFMGEIAEVGSAVTKHHVGERVSGEGHIVCGKCRNCRAGRGHLCRNTLGVGVNRP--GSFAEFVCLPEYNVVTIPDDVPDEIAAIFDPFGNAVHTALSFDLVGE-DVLVTGAGPIGIMGALVAKRSGARKVVITDINPVRLDL 207
BLAST of FC868560 vs. ExPASy Swiss-Prot
Match: TDH_PSYIN (L-threonine 3-dehydrogenase OS=Psychromonas ingrahamii (strain 37) GN=tdh PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.054e-25 Identity = 63/188 (33.51%), Postives = 104/188 (55.32%), Query Frame = 1 Query: 133 LELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLGARAFGAPRIVIVDVDDYRLSV 696 ++ P G D+L+++ +CG+D+H + + PMV+GHE G + +G EV+ GDRV+ E I+C C C+ GR +LC + G+G G A +V PA FK+P +S + ++ +P VH+ ++ E +VLI G+GPIG++ A+ GA +VI D+++YRL + Sbjct: 20 VDKPEPGHNDLLIKIHKTAICGTDIHIYNWDEWSQNTIPVPMVVGHEYVGEVVGMGQEVRGFSVGDRVSGEGHITCGHCRNCRAGRTHLCRNTIGVGVNRT-GAFAEYLVIPAFNAFKIPAGISDDLASIFDPFGNAVHSALSFDVVGE-DVLITGAGPIGIMAAAVAKHAGARYVVITDINEYRLDL 205
BLAST of FC868560 vs. ExPASy Swiss-Prot
Match: TDH_MESSB (L-threonine 3-dehydrogenase OS=Mesorhizobium sp. (strain BNC1) GN=tdh PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.682e-25 Identity = 70/195 (35.90%), Postives = 106/195 (54.36%), Query Frame = 1 Query: 118 LKIQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVH--GCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLGARAFGAPRIVIVDVDDYRLSV 696 L ++ + LP +GP DVL++++ +CG+DVH A V P+V GHE G + VGS V G RV+ E I C C C+ GR +LC + G+G VH G A + P +PD+V E A+ +PL VH ++ E +VL+ G+GPIG++ L A+ GA ++VI D++ RL++ Sbjct: 17 LWMERVPLPEIGPNDVLIKVRKAAICGTDVHIWNWDEWARKTVPVPLVTGHEFVGEVVDVGSAVTEYRIGQRVSGEGHIVCGHCRNCRAGRGHLCRNTLGVG---VHRPGAFAEYISLPQHNVVAIPDDVPDEIAAIFDPLGNAVHTALSFDLVGE-DVLVTGAGPIGIMGALVAQCVGARKVVITDINPGRLAL 207
BLAST of FC868560 vs. ExPASy Swiss-Prot
Match: TDH_AGRRK (L-threonine 3-dehydrogenase OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) GN=tdh PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.503e-25 Identity = 66/194 (34.02%), Postives = 109/194 (56.19%), Query Frame = 1 Query: 118 LKIQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLG-SPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLGARAFGAPRIVIVDVDDYRLSV 696 L ++ + +P +GP DVL+R++ +CG+DVH + A + PMV+GHE G I ++GS V G+RV+ E I C +C C+ GR +LC + G+G + P G V P +PD++ E A+ +P VH ++ E +VL+ G+GPIG++ + A+ GA ++VI D++ RL++ Sbjct: 17 LWMEHVPVPEVGPNDVLIRVRKSAICGTDVHIWNWDQWAQKTIPVPMVVGHEFCGEIAEIGSAVTKYHVGERVSGEGHIVCGKCRNCRAGRGHLCRNTLGVGVNRP--GSFGEFVCIPESNVVPIPDDIPDEVAAIFDPFGNAVHTALSFDLVGE-DVLVTGAGPIGIMGAMVAKRSGARKVVITDINPNRLAL 207
BLAST of FC868560 vs. ExPASy Swiss-Prot
Match: TDH_SYMTH (L-threonine 3-dehydrogenase OS=Symbiobacterium thermophilum GN=tdh PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 5.975e-25 Identity = 66/191 (34.55%), Postives = 103/191 (53.93%), Query Frame = 1 Query: 124 IQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLGARAFGAPRIVIVDVDDYRLSV 696 +Q + +P++GP DVLV+++A +CG+D H + VK P+ IGHE AG + VG EV GD V+ E I C +C C G Y+LC +K LG G A V P + ++ E ++ EPL VH ++ +VLI G GPIG++++ A+ GA ++ +D+++YRL + Sbjct: 19 LQEVPIPTIGPRDVLVKVRAASICGTDYHIYTWDPWSAGRVKPPLTIGHELAGEVVAVGREVTACKVGDYVSAETHIVCNRCPRCHMGEYHLCENTKILG-VDTDGAFAEYVAVPEQNIWVNDKDIPFELQSIQEPLGNAVHTALNGDL-TARSVLITGCGPIGIMSVPVAKMAGAEIVMAMDINEYRLQL 207
BLAST of FC868560 vs. ExPASy Swiss-Prot
Match: TDH_RHIME (L-threonine 3-dehydrogenase OS=Rhizobium meliloti GN=tdh PE=3 SV=2) HSP 1 Score: 114.005 bits (284), Expect = 7.803e-25 Identity = 67/194 (34.54%), Postives = 109/194 (56.19%), Query Frame = 1 Query: 118 LKIQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLG-SPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLGARAFGAPRIVIVDVDDYRLSV 696 L ++ + +P +GP DVL+R++ +CG+DVH + A+ + PMV+GHE G + +VG V G+RV+ E I C +C C+ GR +LC + G+G + P G A V P +PD+V E A+ +P VH ++ E +VL+ G+GPIG++ + A+ GA ++VI D++ RL + Sbjct: 17 LWMERVPVPEIGPNDVLIRVRKSAICGTDVHIWNWDQWAEKTIPVPMVVGHEFMGEVVEVGPAVSKHHVGERVSGEGHIVCGKCRNCRAGRGHLCRNTLGVGVNRP--GSFAEFVCLPEYNVVSIPDDVPDEIAAIFDPFGNAVHTALSFDLVGE-DVLVTGAGPIGIMGAMVAKRCGARKVVITDINPVRLDL 207
BLAST of FC868560 vs. ExPASy Swiss-Prot
Match: TDH_SINMW (L-threonine 3-dehydrogenase OS=Sinorhizobium medicae (strain WSM419) GN=tdh PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.019e-24 Identity = 69/194 (35.57%), Postives = 108/194 (55.67%), Query Frame = 1 Query: 118 LKIQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLG-SPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLGARAFGAPRIVIVDVDDYRLSV 696 L ++ + +P +GP DVL+R++ +CG+DVH + A + PMV+GHE G I +VG V G+RV+ E I C +C C+ GR +LC + G+G + P G A V P +PD+V E A+ +P VH ++ E +VL+ G+GPIG++ L A+ GA ++VI D++ RL + Sbjct: 17 LWMERVPVPEVGPNDVLIRVRKSAICGTDVHIWNWDQWAQKTIPVPMVVGHEFMGEIVEVGPAVTKHHVGERVSGEGHIVCGKCRNCRAGRGHLCRNTLGVGVNRP--GSFAEFVCLPEYNVVSIPDDVPDEIAAIFDPFGNAVHTALSFDLVGE-DVLVTGAGPIGIMGALVAKRCGARKVVITDINPVRLDL 207
BLAST of FC868560 vs. ExPASy Swiss-Prot
Match: TDH_RHILO (L-threonine 3-dehydrogenase OS=Rhizobium loti GN=tdh PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.019e-24 Identity = 65/192 (33.85%), Postives = 104/192 (54.17%), Query Frame = 1 Query: 124 IQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLG-SPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLGARAFGAPRIVIVDVDDYRLSV 696 ++ + +P +GP DVL++++ +CG+DVH + A V PMV GHE G + G+ V G RV+ E I C C C+ GR +LC + G+G + P G + P +PD+V E A+ +PL VH ++ E +VL+ G+GPIG++ L A+ GA ++VI D++ RL++ Sbjct: 19 MEEVPVPEIGPNDVLIKIRKTAICGTDVHIYNWDQWAQKTVPVPMVTGHEFVGTVADFGAAVTEYKVGQRVSGEGHIVCGHCRNCRAGRGHLCRNTLGVGVNRP--GAFGEYLAIPQHNVVPIPDDVPDEIAAIFDPLGNAVHTALSFDLVGE-DVLVTGAGPIGIMGALVAQCVGARKVVITDINPVRLAL 207
BLAST of FC868560 vs. ExPASy Swiss-Prot
Match: TDH_SOLUE (L-threonine 3-dehydrogenase OS=Solibacter usitatus (strain Ellin6076) GN=tdh PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.331e-24 Identity = 69/194 (35.57%), Postives = 103/194 (53.09%), Query Frame = 1 Query: 118 LKIQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLG-SPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLGARAFGAPRIVIVDVDDYRLSV 696 L ++ + P++G DVL+R+ G+CG+DVH K A + PM IGHE G IE VGS V PGD V+ E + C +C C GR +LC ++ G+G + P G A + P ++ + + L+ A+ +P VH + E +VLI G+GPIG++ AR A VI D++ YRL + Sbjct: 13 LWLEEIPEPAIGINDVLIRVLRTGICGTDVHIYKWDEWARETIHVPMAIGHEFVGRIEAVGSNVADFFPGDIVSGEGHVVCGRCRNCFAGRRHLCAKTMGVGVNRP--GAFAEYIALPMTNIWRHHEGIDLDVAAIFDPFGNAVHTALSFPVLGE-DVLITGAGPIGIMAAAVARHAAARYTVITDLNPYRLEL 203
BLAST of FC868560 vs. ExPASy Swiss-Prot
Match: TDH_BACSU (L-threonine 3-dehydrogenase OS=Bacillus subtilis GN=tdh PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.738e-24 Identity = 61/184 (33.15%), Postives = 102/184 (55.43%), Query Frame = 1 Query: 139 LPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLGARAFGAPRIVIVDVDDYRL 690 +P + ++VL+++KA +CG+DVH + A +K P V GHE +G++E VG V ++ G+ V+ E I C +C C G+ ++C + +G GC A V PAD ++ P ++ ++ EPL VH + T +I G GPIGL+ + A+A GA +++ +D ++YRL Sbjct: 25 IPEIDKHEVLIKVKAASICGTDVHIYNWDQWARQRIKTPYVFGHEFSGIVEGVGENVSSVKVGEYVSAETHIVCGECVPCLTGKSHVCTNTAIIGVDTA-GCFAEYVKVPADNIWRNPADMDPSIASIQEPLGNAVHTVLESQPAGGTTAVI-GCGPIGLMAVAVAKAAGASQVIAIDKNEYRL 206 The following BLAST results are available for this feature:
BLAST of FC868560 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 320
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868560 ID=FC868560; Name=FC868560; organism=Citrus clementina; type=EST; length=697bpback to top |