FC868560

Overview
NameFC868560
Unique NameFC868560
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length697
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868560 vs. ExPASy Swiss-Prot
Match: ADHB_BACSU (Uncharacterized zinc-type alcohol dehydrogenase-like protein adhB OS=Bacillus subtilis GN=adhB PE=3 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 1.129e-15
Identity = 56/197 (28.43%), Postives = 95/197 (48.22%), Query Frame = 1
Query:  160 DVLVRMKAVGVCGSDVHFLKTLRLADFV--VKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQV-VHPADLC------------FKLPDNVSLEE-----GAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLGARAFGAPRIVIVDVDDYRL 690
            D+++++ +  +CGSD+H +       F+  ++E  VIGHE  G++E+VGS V  L  GDRV +   I+C +C +CK    + C +S   G    +   + Q   +P                FK+P+  S EE       + + ++ G  +   A +     V+++G GP+GL         GA R++ VD  +YRL
Sbjct:   27 DMIIKVTSTAICGSDLHLIH-----GFIPNMQEDYVIGHEPMGIVEEVGSGVTKLKKGDRVIIPFNIACGECFFCKNQLESQCDQSNDNGEMGAYFGYSGQTGGYPGGQAEYLRVPFANFTHFKIPE--SCEEPDEKLSVIADAMTTGFWSVDNAGVKKGDTVIVLGCGPVGLFAQKFCWLKGAKRVIAVDYVNYRL 216          
BLAST of FC868560 vs. ExPASy Swiss-Prot
Match: ADH7_RAT (Alcohol dehydrogenase class 4 mu/sigma chain OS=Rattus norvegicus GN=Adh7 PE=1 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 1.129e-15
Identity = 62/218 (28.44%), Postives = 100/218 (45.87%), Query Frame = 1
Query:   91 AAWLMGVNT-LKIQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPES----KGL-----------GSPPVH----GCLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGVHAC-RRANIGPETNVLIMGSGPIGLVTMLGARAFGAPRIVIVDVD 678
            AA L G N    I+ +E+      +V V++ A G+CG+D H +K   ++ F    P+++GHE  G++E VG EV T+ PGD+V       C +C+ C+    NLC  S    +G+           G P  H           V       K+      E+  +     S G  A  + A + P +   + G G +GL  ++G +A GA RI+ +D++
Sbjct:   12 AAVLWGTNQPFSIEDIEVAPPKAKEVRVKILATGICGTDDHVIKGTMVSKF----PVIVGHEAVGIVESVGEEVTTVRPGDKVIPLFLPQCRECNPCRNPEGNLCIRSDLTGRGVLADGTTRFTCKGKPVQHFMNTSTFTEYTVLDESSVAKIDAEAPPEKACLIGCGFSTGYGAAVKTAKVSPGSTCAVFGLGGVGLSVVMGCKAAGASRIIGIDIN 225          
BLAST of FC868560 vs. ExPASy Swiss-Prot
Match: YDJL_ECOLI (Uncharacterized zinc-type alcohol dehydrogenase-like protein ydjL OS=Escherichia coli (strain K12) GN=ydjL PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.516e-15
Identity = 55/191 (28.80%), Postives = 96/191 (50.26%), Query Frame = 1
Query:  142 PSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALE-PGISCWQCDYCKGGRYNLCPESKGLG--SPPVHGCLANQVVHPADLC-------FKLPDNVSLEEGAMCEPLSVGVHA-CRRANIGPETNVLIMGSGPIGLVTMLGARAFGAPRIVIVDVDD 681
            P  GP DV++ +KA  +CG+D+        +D   +   + GHE AG I +VG +VK    G RV  +  G  C  C  C+ G +  C E   LG  +    G  +   + P ++        +++PD V  E+ A+ +P+     +  +++   P  +V+++G+GP+GL ++  AR  GA  IV+V + +
Sbjct:   22 PMCGPEDVVIEIKAAAICGADMKHYNVDSGSD---EFNSIRGHEFAGCIAQVGEKVKDWKVGQRVVSDNSGHVCGVCPACEQGDFLCCTEKVNLGLDNNTWGGGFSKYCLVPGEILKIHRHALWEIPDGVDYEDAAVLDPICNAYKSIAQQSKFLPGQDVVVIGTGPLGLFSVQMARIMGAVNIVVVGLQE 209          
BLAST of FC868560 vs. ExPASy Swiss-Prot
Match: ADH_SCHPO (Alcohol dehydrogenase OS=Schizosaccharomyces pombe GN=adh1 PE=1 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 2.516e-15
Identity = 63/198 (31.82%), Postives = 101/198 (51.01%), Query Frame = 1
Query:  106 GVNTLKIQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVV--KEPMVIGHECAGVIEKVGSEVKTLVPGDRVALE-PGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGVHACRRANIGPETNVLIMGS-GPIGLVTMLGARAFGAPRIVIVDVDD 681
            G   +K + + +   G  +VLV +K  GVC +D+H L+     D+ +  K P++ GHE AGV+ KVG+ V  L  GDRV ++    SC  C+YC      +CP  + L    V G   +  +  A     +P++V LE  A  MC  ++    A + + +GP   + I G+ G +G + +  A+A  A R+V +D  D
Sbjct:   17 GPENVKFEEVPVAEPGQDEVLVNIKYTGVCHTDLHALQ----GDWPLPAKMPLIGGHEGAGVVVKVGAGVTRLKIGDRVGVKWMNSSCGNCEYCMKAEETICPHIQ-LSGYTVDGTFQHYCIANATHATIIPESVPLEVAAPIMCAGITC-YRALKESKVGPGEWICIPGAGGGLGHLAVQYAKAM-AMRVVAIDTGD 207          
BLAST of FC868560 vs. ExPASy Swiss-Prot
Match: DOIAD_STRRY (2-deoxy-scyllo-inosamine dehydrogenase OS=Streptomyces rimosus subsp. paromomycinus GN=parE PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.286e-15
Identity = 54/179 (30.17%), Postives = 85/179 (47.49%), Query Frame = 1
Query:  136 ELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLGARAFGAPRIVIVD 672
            ++P   P + LV++    +CGSD+ F K +         P+V GHE +G + + G     LV G  V  +  ++C  C +C  G+  LC + + LG      C A  +  P     +LP+ +SL E    EPL+V ++A  R  +     V I G+G IGL+     R  GA   V+ +
Sbjct:   18 DVPEPAPGEALVKLAYNSICGSDLSFYKGVWHG---FTYPVVPGHEWSGTVVEAGGGAADLV-GQNVVGDLTVACGSCRHCTVGKPTLCADLQELGFTRDGAC-AEYMTVPTGNLHRLPEGLSLREATQVEPLAVALNAVDRLAVTAGEKVAITGAGGIGLLLAQAVRLRGAEVTVLAE 191          
BLAST of FC868560 vs. ExPASy Swiss-Prot
Match: ADH1B_HUMAN (Alcohol dehydrogenase 1B OS=Homo sapiens GN=ADH1B PE=1 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 4.292e-15
Identity = 59/208 (28.37%), Postives = 97/208 (46.63%), Query Frame = 1
Query:  124 IQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSP----------------PVHGCL-----ANQVVHPADLCFKLPDNVSLEEGAM--CEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLGARAFGAPRIVIVDVD 678
            I+ +E+     Y+V ++M AVG+C +D H +      + V   P+++GHE AG++E VG  V T+ PGD+V       C +C  CK    N C ++  LG+P                P+H  L     +   V   +   K+     LE+  +  C   +    A   A + P +   + G G +GL  ++G +A GA RI+ VD++
Sbjct:   24 IEDVEVAPPKAYEVRIKMVAVGICRTDDHVVS----GNLVTPLPVILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKN-DLGNPRGTLQDGTRRFTCRGKPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDIN 226          
BLAST of FC868560 vs. ExPASy Swiss-Prot
Match: FADH_PICPA (S-(hydroxymethyl)glutathione dehydrogenase OS=Pichia pastoris GN=FLD1 PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 9.561e-15
Identity = 67/218 (30.73%), Postives = 105/218 (48.17%), Query Frame = 1
Query:   94 AWLMGVNTLKIQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLC-----PESKGL-----------GSPPVH--GCLA-NQVVHPADL-CFKLPDNVSLEEGAM--CEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLGARAFGAPRIVIVDVDD 681
            AW  G + L I+ +E+     ++V V+++  GVC +D +   TL  AD     P+V GHE AGV+E VG  V+++  GD V L     C +C +C  G+ NLC      + KGL           G    H  GC + +Q    AD+   K+ D    ++  +  C   +    A   A I     + + G+G IGL  + GA + GA  I+++D++D
Sbjct:   15 AWEAGKD-LSIEEIEVLPPRAHEVRVKVEFTGVCHTDAY---TLSGADAEGSFPVVFGHEGAGVVESVGEGVESVKVGDSVVLLYTPECRECKFCLSGKTNLCGKIRATQGKGLLPDGTSRFRCKGKDLFHYMGCSSFSQYTVVADISVVKVQDEAPKDKTCLLGCGVTTGYGAAINTAKISKGDKIGVFGAGCIGLSVIQGAVSKGASEIIVIDIND 228          
BLAST of FC868560 vs. ExPASy Swiss-Prot
Match: ADH1_NAJNA (Alcohol dehydrogenase 1 OS=Naja naja PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 9.561e-15
Identity = 64/218 (29.36%), Postives = 102/218 (46.79%), Query Frame = 1
Query:   94 AWLMGVNTLKIQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPE---SKGLGSPP------------VHGCLANQ------VVHPADLCFKLPDNVSLEEGAMCE-PLSVGVHAC-RRANIGPETNVLIMGSGPIGLVTMLGARAFGAPRIVIVDVD 678
            AW +    L I+ +E+     ++V +++ A GVC SD H +       F +  PMV+GHE AGV+E VG  V  + PGD+V       C +C  C+  + NLC     + G G  P            +H  ++        VVH   +  K+  +  LE+  +     S G  A  + A + P +   + G G +GL  ++G +A GA RI+ VD++
Sbjct:   14 AWELN-KPLSIEQIEVAPPKAHEVRIKILATGVCRSDEHVIS----GAFRMPLPMVLGHEAAGVVESVGEGVTCVKPGDKVIPLFAPQCGKCRACQSPKGNLCTSNDLNSGSGLMPDGTSRFTCKGKSIHHFISTSTFTEYTVVHENSV-VKIDPSAPLEKVCLIGCGFSTGYGAAMQTAKVEPGSICAVFGLGGVGLSVVMGCKAAGASRIIGVDIN 225          
BLAST of FC868560 vs. ExPASy Swiss-Prot
Match: DOIAD_STRLV (2-deoxy-scyllo-inosamine dehydrogenase OS=Streptomyces lividus GN=livE PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.249e-14
Identity = 58/171 (33.92%), Postives = 79/171 (46.20%), Query Frame = 1
Query:  136 ELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLGARAFG 648
            +LP   P + LVR+    VCGSD+ F K +         P+V GHE +G +  V      LV  D V  +   SC  C +C  G+  LC + + LG      C A  +  PA    +LP   SL      EPL+V ++A  R  + P   V I G+G IGL+  L  R  G
Sbjct:   18 DLPEPAPGEALVRLAYNSVCGSDLSFYKGVWHGSTY---PVVPGHEWSGTVVDVNGADSGLVGVDVVG-DLTCSCGTCRHCAEGKPTLCGDLQELGFTRDGAC-AEYMTIPAANLHRLPPGTSLRAACQVEPLAVALNAVDRLAVVPGEKVAITGAGGIGLLLALAVRQRG 183          
BLAST of FC868560 vs. ExPASy Swiss-Prot
Match: ADH_SULAC (NAD-dependent alcohol dehydrogenase OS=Sulfolobus acidocaldarius GN=adh PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.631e-14
Identity = 60/199 (30.15%), Postives = 99/199 (49.75%), Query Frame = 1
Query:  118 LKIQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTL---RLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHP-ADLCFKLPD-NVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGS-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV 696
            L+++ +++P +G   VLV++   GVC +D+         R++      P+VIGHE AG + ++G  V+     D+V ++P I    C YCK G    C   K LG   V+G     V+ P     FKL + + S      C  ++    A R AN+ P  +V+I+G+ G +G + +  A+A     I+ VDV +  L +
Sbjct:   13 LRLEDMDVPKVGVGQVLVKVDYAGVCHTDLSVRSGAIFNRISSSKPTLPLVIGHEIAGEVVELGGNVEGFKKSDKVLIDPWIGDGSCHYCKIGEDQYCDNPKWLGI-NVNGGYGEYVLVPDYRYMFKLRNLSTSTASPLACSGVT-AYRALRLANLDPSKSVMIIGAGGGLGSIAVQIAKAIHGSFIIGVDVSEEGLKL 209          
The following BLAST results are available for this feature:
BLAST of FC868560 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 320
Match NameE-valueIdentityDescription
ADHB_BACSU1.129e-1528.43Uncharacterized zinc-type alcohol dehydrogenase-li... [more]
ADH7_RAT1.129e-1528.44Alcohol dehydrogenase class 4 mu/sigma chain OS=Ra... [more]
YDJL_ECOLI2.516e-1528.80Uncharacterized zinc-type alcohol dehydrogenase-li... [more]
ADH_SCHPO2.516e-1531.82Alcohol dehydrogenase OS=Schizosaccharomyces pombe... [more]
DOIAD_STRRY3.286e-1530.172-deoxy-scyllo-inosamine dehydrogenase OS=Streptom... [more]
ADH1B_HUMAN4.292e-1528.37Alcohol dehydrogenase 1B OS=Homo sapiens GN=ADH1B ... [more]
FADH_PICPA9.561e-1530.73S-(hydroxymethyl)glutathione dehydrogenase OS=Pich... [more]
ADH1_NAJNA9.561e-1529.36Alcohol dehydrogenase 1 OS=Naja naja PE=1 SV=1[more]
DOIAD_STRLV1.249e-1433.922-deoxy-scyllo-inosamine dehydrogenase OS=Streptom... [more]
ADH_SULAC1.631e-1430.15NAD-dependent alcohol dehydrogenase OS=Sulfolobus ... [more]

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Properties
Property NameValue
Genbank descriptionC31001H08EF AbioticL1 Citrus clementina cDNA clone C31001H08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868560 ID=FC868560; Name=FC868560; organism=Citrus clementina; type=EST; length=697bp
GGCACTTGTGTTTTTGAAGAGTGCAAAGCAAATATGGGCAAGGGAGGGAT
GTCACAAGGAGAAAAGGAAGATGGAGAAGAAGTTAACATGGCAGCTTGGC
TTATGGGTGTCAACACCCTCAAGATTCAGCCTTTGGAGCTTCCTTCTCTG
GGACCTTATGATGTTTTAGTCAGGATGAAAGCCGTTGGTGTTTGTGGAAG
TGATGTGCATTTTCTCAAGACCTTGAGGCTTGCCGATTTTGTAGTGAAAG
AGCCTATGGTGATCGGGCATGAGTGTGCTGGGGTCATAGAGAAGGTGGGA
AGCGAGGTGAAGACTTTGGTGCCCGGTGACCGTGTGGCCCTGGAACCAGG
GATCAGCTGCTGGCAATGTGATTACTGCAAAGGAGGTCGATACAATTTGT
GTCCAGAGTCGAAAGGTCTTGGAAGTCCGCCAGTTCATGGTTGTCTGGCT
AATCAGGTGGTGCATCCTGCAGACCTATGTTTTAAGCTGCCCGACAATGT
CAGCCTGGAGGAAGGGGCTATGTGTGAGCCCTTGAGTGTTGGTGTTCATG
CCTGCCGCCGTGCCAATATCGGTCCTGAGACAAATGTGCTTATCATGGGA
TCAGGGCCCATAGGACTTGTCACAATGCTAGGAGCTCGTGCTTTTGGAGC
TCCTAGAATTGTCATTGTGGATGTGGATGACTATCGTTTATCTGTTG
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