FC868656

Overview
NameFC868656
Unique NameFC868656
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length710
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: HS71L_MACFA (Heat shock 70 kDa protein 1-like OS=Macaca fascicularis GN=HSPA1L PE=2 SV=1)

HSP 1 Score: 351.288 bits (900), Expect = 3.002e-96
Identity = 180/236 (76.27%), Postives = 203/236 (86.02%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYXGIDFLLTIT 710
            TVFDAK LIGR+F+D  VQ DMKLWPF+VI     KP + V+YKGE K F  EEISSMVL KM+E AEA+LG  + NAV+TVPAYFNDSQRQATKDAGVIAGLNV+RIINEPTAAAIAYGLDK     GE++VLIFDLGGGTFDVS+LTI++GIFEVKATAGDTHLGGEDFDNR+V+HFV+EFKRK+KKDIS N RA+RRLRTACERAKRTLSS+ Q  +EIDSLY GIDF  +IT
Sbjct:   68 TVFDAKRLIGRKFNDPVVQSDMKLWPFQVI-NEGGKPKVLVSYKGENKAFYPEEISSMVLTKMKETAEAFLGHPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAIAYGLDKGGR--GERHVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRLVSHFVEEFKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQANLEIDSLYEGIDFYTSIT 300          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: HSP70_PLAFA (Heat shock 70 kDa protein OS=Plasmodium falciparum PE=2 SV=2)

HSP 1 Score: 350.903 bits (899), Expect = 3.920e-96
Identity = 181/237 (76.37%), Postives = 206/237 (86.92%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNK-KDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYXGIDFLLTIT 710
            TVFDAK LIGR+F+++SVQ DMK WPF V +G  +KPMI V Y+GE+K F  EEISSMVL KM+E AEA+LG +IKNAV+TVPAYFNDSQRQATKDAG IAGLNVMRIINEPTAAAIAYGL KK    GEKN+LIFDLGGGTFDVSLLTIE+GIFEVKATAGDTHLGGEDFDNR+VN  V++FKRKN+ KD+S N RALRRLRT CERAKRTLSS+ Q TIEIDSL+ GID+ +T++
Sbjct:   77 TVFDAKRLIGRKFTESSVQSDMKHWPFTVKSGVDEKPMIEVTYQGEKKLFHPEEISSMVLQKMKENAEAFLGKSIKNAVITVPAYFNDSQRQATKDAGTIAGLNVMRIINEPTAAAIAYGLHKKGK--GEKNILIFDLGGGTFDVSLLTIEDGIFEVKATAGDTHLGGEDFDNRLVNFCVEDFKRKNRGKDLSKNSRALRRLRTQCERAKRTLSSSTQATIEIDSLFEGIDYSVTVS 311          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: HSP72_YEAST (Heat shock protein SSA2 OS=Saccharomyces cerevisiae GN=SSA2 PE=1 SV=3)

HSP 1 Score: 350.132 bits (897), Expect = 6.687e-96
Identity = 181/236 (76.69%), Postives = 204/236 (86.44%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYXGIDFLLTIT 710
            TVFDAK LIGR F+D  VQGDMK +PFK+I     KP I V +KGE K F  E+ISSMVL KM+E AE+YLG+ + +AVVTVPAYFNDSQRQATKDAG IAGLNV+RIINEPTAAAIAYGLDKK     E++VLIFDLGGGTFDVSLL+IE+GIFEVKATAGDTHLGGEDFDNR+VNHF+QEFKRKNKKD+S N RALRRLRTACERAKRTLSS+AQT++EIDSL+ GIDF  +IT
Sbjct:   64 TVFDAKRLIGRNFNDPEVQGDMKHFPFKLIDVDG-KPQIQVEFKGETKNFTPEQISSMVLGKMKETAESYLGAKVNDAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKGK---EEHVLIFDLGGGTFDVSLLSIEDGIFEVKATAGDTHLGGEDFDNRLVNHFIQEFKRKNKKDLSTNQRALRRLRTACERAKRTLSSSAQTSVEIDSLFEGIDFYTSIT 295          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: HSP71_PICAN (Heat shock protein 70 1 OS=Pichia angusta GN=HSA1 PE=1 SV=2)

HSP 1 Score: 350.132 bits (897), Expect = 6.687e-96
Identity = 177/236 (75.00%), Postives = 201/236 (85.17%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYXGIDFLLTIT 710
            TVFDAK LIGR+F D  VQ D+K +PFKV+     KP I V +KGE K F  EEISSMVL KM+E AE+Y+G  + +AV+TVPAYFNDSQRQATKDAG+IAGLNV+RIINEPTAAAIAYGLDKK    GE+N+LIFDLGGGTFDVSLL+I+EGIFEVKATAGDTHLGGEDFDNR+VNHF  EFKRK KKD++ N RALRRLRTACERAKRTLSS+AQT++EIDSLY GIDF  +IT
Sbjct:   64 TVFDAKRLIGRKFDDPEVQNDIKHFPFKVVE-KGGKPHIQVEFKGETKVFTPEEISSMVLTKMKETAESYMGGKVTDAVITVPAYFNDSQRQATKDAGLIAGLNVLRIINEPTAAAIAYGLDKKEQGKGEQNILIFDLGGGTFDVSLLSIDEGIFEVKATAGDTHLGGEDFDNRLVNHFANEFKRKYKKDLTTNQRALRRLRTACERAKRTLSSSAQTSVEIDSLYEGIDFYTSIT 298          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: HS71L_HUMAN (Heat shock 70 kDa protein 1-like OS=Homo sapiens GN=HSPA1L PE=1 SV=2)

HSP 1 Score: 350.132 bits (897), Expect = 6.687e-96
Identity = 179/236 (75.85%), Postives = 203/236 (86.02%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYXGIDFLLTIT 710
            TVFDAK LIGR+F+D  VQ DMKLWPF+VI     KP + V+YKGE K F  EEISSMVL K++E AEA+LG  + NAV+TVPAYFNDSQRQATKDAGVIAGLNV+RIINEPTAAAIAYGLDK     GE++VLIFDLGGGTFDVS+LTI++GIFEVKATAGDTHLGGEDFDNR+V+HFV+EFKRK+KKDIS N RA+RRLRTACERAKRTLSS+ Q  +EIDSLY GIDF  +IT
Sbjct:   68 TVFDAKRLIGRKFNDPVVQADMKLWPFQVI-NEGGKPKVLVSYKGENKAFYPEEISSMVLTKLKETAEAFLGHPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAIAYGLDKGGQ--GERHVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRLVSHFVEEFKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQANLEIDSLYEGIDFYTSIT 300          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: HSP76_SAGOE (Heat shock 70 kDa protein 6 OS=Saguinus oedipus GN=HSPA6 PE=2 SV=1)

HSP 1 Score: 349.362 bits (895), Expect = 1.141e-95
Identity = 173/236 (73.31%), Postives = 207/236 (87.71%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYXGIDFLLTIT 710
            TVFDAK LIGR+F+DA+VQ DMK WPF+V++    KP + V+Y+GE+K F  EEISSMVL KM+E AEAYLG  +K+AV+TVPAYFNDSQRQATKDAG IAGLNV+RIINEPTAAAIA+GLD++    GE+NVLIFDLGGGTFDVS+L+I+ G+FEVKATAGDTHLGGEDFDNR+VNHFV+EF+RK++KD+S N RALRRLRTACERAKRTLSS+ Q T+EIDSL+ G+DF  +IT
Sbjct:   68 TVFDAKRLIGRKFADATVQADMKHWPFQVVSEGC-KPKVRVSYRGEDKSFYPEEISSMVLSKMKETAEAYLGQPVKHAVITVPAYFNDSQRQATKDAGAIAGLNVLRIINEPTAAAIAHGLDRRGA--GERNVLIFDLGGGTFDVSVLSIDAGVFEVKATAGDTHLGGEDFDNRLVNHFVEEFRRKHRKDLSWNKRALRRLRTACERAKRTLSSSTQATLEIDSLFEGVDFYTSIT 300          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: HSP76_HUMAN (Heat shock 70 kDa protein 6 OS=Homo sapiens GN=HSPA6 PE=1 SV=2)

HSP 1 Score: 349.362 bits (895), Expect = 1.141e-95
Identity = 173/236 (73.31%), Postives = 205/236 (86.86%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYXGIDFLLTIT 710
            TVFDAK LIGR+F+D +VQ DMK WPF+V++    KP + V Y+GE+K F  EEISSMVL KM+E AEAYLG  +K+AV+TVPAYFNDSQRQATKDAG IAGLNV+RIINEPTAAAIAYGLD++    GE+NVLIFDLGGGTFDVS+L+I+ G+FEVKATAGDTHLGGEDFDNR+VNHF++EF+RK+ KD+SGN RALRRLRTACERAKRTLSS+ Q T+EIDSL+ G+DF  +IT
Sbjct:   68 TVFDAKRLIGRKFADTTVQSDMKHWPFRVVS-EGGKPKVRVCYRGEDKTFYPEEISSMVLSKMKETAEAYLGQPVKHAVITVPAYFNDSQRQATKDAGAIAGLNVLRIINEPTAAAIAYGLDRRGA--GERNVLIFDLGGGTFDVSVLSIDAGVFEVKATAGDTHLGGEDFDNRLVNHFMEEFRRKHGKDLSGNKRALRRLRTACERAKRTLSSSTQATLEIDSLFEGVDFYTSIT 300          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: HSP70_BRELC (Heat shock 70 kDa protein OS=Bremia lactucae GN=HSP70 PE=3 SV=1)

HSP 1 Score: 349.362 bits (895), Expect = 1.141e-95
Identity = 180/236 (76.27%), Postives = 203/236 (86.02%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYXGIDFLLTIT 710
            TVFDAK LIGR+FSD  VQ D+K WPFK+ +G     ++ V +KGE K F  EEISSMVLIKMRE+AEA++G  +KNAV+TVPAYFNDSQRQATKDAG IAGLNV+RIINEPTAAAIAYGLDKK    GE+NVLIFDLGGGTFDVSLL+IEEGIFEVK+TA DTHLGGEDFDNR+V+HF QEFKRK++KDI+ N RALRRLRTACERAKRTLSS+AQ  IEIDSL+ GIDF  TIT
Sbjct:   69 TVFDAKPLIGRKFSDPIVQADIKHWPFKLTSGWRQAQIV-VQFKGESKTFQPEEISSMVLIKMREVAEAFIGKEVKNAVITVPAYFNDSQRQATKDAGAIAGLNVLRIINEPTAAAIAYGLDKKG---GERNVLIFDLGGGTFDVSLLSIEEGIFEVKSTARDTHLGGEDFDNRLVDHFTQEFKRKHRKDITENQRALRRLRTACERAKRTLSSSAQAYIEIDSLFDGIDFNSTIT 300          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: HSP70_BLAEM (Heat shock 70 kDa protein OS=Blastocladiella emersonii GN=HSP70 PE=3 SV=1)

HSP 1 Score: 348.206 bits (892), Expect = 2.541e-95
Identity = 182/236 (77.12%), Postives = 199/236 (84.32%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYXGIDFLLTIT 710
            TVFDAK LIGRRF D  VQ DMK W F V+     KP+  V +KGE K F  EE SSM+L KM+E AEAYLG+ + +AVVTVPAYFNDSQRQATKDAG IAGLNV+RIINEPTAAAIAYGLDKKA   GEKNVLIFDLGGGTFDVSLLTIE+GIFEVKATAGDTHLG EDFDNR+VNHFVQEFKRK+KKD+SG  R  RRLRTACERAKRTLSS+AQT+IEIDSL+ GIDF  +IT
Sbjct:   69 TVFDAKRLIGRRFDDDVVQADMKHWSFTVV-NKNSKPLFQVEFKGETKTFTPEEFSSMILTKMKETAEAYLGTKVNHAVVTVPAYFNDSQRQATKDAGAIAGLNVLRIINEPTAAAIAYGLDKKA-EAGEKNVLIFDLGGGTFDVSLLTIEDGIFEVKATAGDTHLGAEDFDNRLVNHFVQEFKRKHKKDLSGKARP-RRLRTACERAKRTLSSSAQTSIEIDSLFEGIDFYTSIT 301          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: HSP76_PIG (Heat shock 70 kDa protein 6 OS=Sus scrofa GN=HSPA6 PE=2 SV=1)

HSP 1 Score: 347.821 bits (891), Expect = 3.319e-95
Identity = 171/236 (72.46%), Postives = 206/236 (87.29%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYXGIDFLLTIT 710
            TVFDAK LIGR+F+D +VQ D+K WPF+V++    KP + V+Y+GE+K F  EEISSMVL KM+E AEAYLG  +++AV+TVPAYFNDSQRQATKDAG IAGLNV+RIINEPTAAAIAYGLD++    GE+NVLIFDLGGGTFDVS+LTI+ G+FEVKATAGDTHLGGEDFDNR+VNHF++EF+RK++KD+S N RALRRLRTACERAKRTLSS+ Q T+EIDSL+ G+DF  +IT
Sbjct:   68 TVFDAKRLIGRKFADPTVQSDLKHWPFQVVS-EGGKPKVRVSYRGEDKAFYPEEISSMVLSKMKETAEAYLGQPVRHAVITVPAYFNDSQRQATKDAGAIAGLNVLRIINEPTAAAIAYGLDRRGA--GERNVLIFDLGGGTFDVSVLTIDAGVFEVKATAGDTHLGGEDFDNRLVNHFMEEFRRKHRKDLSRNKRALRRLRTACERAKRTLSSSTQATLEIDSLFEGVDFYTSIT 300          
The following BLAST results are available for this feature:
BLAST of FC868656 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HS71L_MACFA3.002e-9676.27Heat shock 70 kDa protein 1-like OS=Macaca fascicu... [more]
HSP70_PLAFA3.920e-9676.37Heat shock 70 kDa protein OS=Plasmodium falciparum... [more]
HSP72_YEAST6.687e-9676.69Heat shock protein SSA2 OS=Saccharomyces cerevisia... [more]
HSP71_PICAN6.687e-9675.00Heat shock protein 70 1 OS=Pichia angusta GN=HSA1 ... [more]
HS71L_HUMAN6.687e-9675.85Heat shock 70 kDa protein 1-like OS=Homo sapiens G... [more]
HSP76_SAGOE1.141e-9573.31Heat shock 70 kDa protein 6 OS=Saguinus oedipus GN... [more]
HSP76_HUMAN1.141e-9573.31Heat shock 70 kDa protein 6 OS=Homo sapiens GN=HSP... [more]
HSP70_BRELC1.141e-9576.27Heat shock 70 kDa protein OS=Bremia lactucae GN=HS... [more]
HSP70_BLAEM2.541e-9577.12Heat shock 70 kDa protein OS=Blastocladiella emers... [more]
HSP76_PIG3.319e-9572.46Heat shock 70 kDa protein 6 OS=Sus scrofa GN=HSPA6... [more]

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Properties
Property NameValue
Genbank descriptionC31003B06EF AbioticL1 Citrus clementina cDNA clone C31003B06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868656 ID=FC868656; Name=FC868656; organism=Citrus clementina; type=EST; length=710bp
ACACCGTCTTTGATGCAAAGAGCTTGATTGGTAGGAGATTCAGCGATGCA
TCAGTCCAAGGAGATATGAAGCTATGGCCATTTAAGGTGATTGCTGGACC
AGCTGACAAGCCCATGATTGGTGTTAACTACAAGGGCGAAGAGAAGCAGT
TTGCTGCTGAGGAAATCTCGTCTATGGTGCTCATCAAGATGCGTGAGATT
GCCGAGGCTTACCTTGGCTCAACTATTAAGAATGCAGTCGTTACTGTCCC
TGCTTACTTCAATGACTCACAGAGGCAGGCCACCAAGGATGCTGGTGTCA
TTGCTGGGCTTAATGTGATGCGTATCATCAATGAGCCCACTGCTGCTGCC
ATTGCTTATGGCCTTGACAAGAAGGCTACTAGTGTGGGTGAGAAGAATGT
GTTGATCTTTGATTTGGGTGGTGGTACTTTTGATGTGTCGTTGCTCACTA
TTGAGGAGGGAATCTTTGAAGTGAAGGCTACTGCTGGAGACACTCATCTT
GGTGGTGAGGATTTTGATAACAGAATGGTGAATCATTTTGTTCAGGAGTT
TAAGAGGAAGAACAAGAAGGATATTAGTGGCAACCCTAGAGCTCTTAGGA
GATTGAGGACTGCTTGTGAGAGAGCGAAGAGGACTCTCTCCTCTACTGCC
CAGACTACAATTGAGATTGATTCTTTGTATGANGGTATTGACTTTCTACT
CACCATAACT
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