FC868664 | Citrus Genome Database

Overview


Name	FC868664
Unique Name	FC868664
Type	EST
Organism	Citrus clementina (Clementine)
Sequence length	702

Libraries


Library Name	Type
AbioticL1	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of FC868664 vs. ExPASy Swiss-Prot
Match: CATA2_WHEAT (Catalase OS=Triticum aestivum GN=CATA PE=2 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.790e-55
Identity = 89/111 (80.18%), Postives = 97/111 (87.39%), Query Frame = 1

Query:   79 PTDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVLSFYFP 411
            P DVTK WPEDIIPLQPVGR+VLNKNIDNFFAENE LAF P + VPGI+YS+DK+LQ RIF+Y DTQRHRLGPNYLMLPVNAPKC H NNH+DG MNF+HRDEEV   YFP
Sbjct:  286 PLDVTKTWPEDIIPLQPVGRMVLNKNIDNFFAENEQLAFCPAVTVPGIHYSDDKLLQTRIFSYADTQRHRLGPNYLMLPVNAPKCAHHNNHHDGLMNFIHRDEEV--NYFP 394

HSP 2 Score: 44.669 bits (104), Expect = 1.790e-55
Identity = 18/24 (75.00%), Postives = 21/24 (87.50%), Query Frame = 2

Query:   14 HPEWKLYIQTIDPDHEDQFVSDPL 85
            +PEWKL+IQTID DHED+F  DPL
Sbjct:  264 YPEWKLFIQTIDADHEDRFDFDPL 287

[Close]

BLAST of FC868664 vs. ExPASy Swiss-Prot
Match: CATA1_HORVU (Catalase isozyme 1 OS=Hordeum vulgare GN=CAT1 PE=2 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.790e-55
Identity = 89/111 (80.18%), Postives = 97/111 (87.39%), Query Frame = 1

Query:   79 PTDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVLSFYFP 411
            P DVTK WPEDIIPLQPVGR+VLNKNIDNFFAENE LAF P + VPGI+YS+DK+LQ RIF+Y DTQRHRLGPNYLMLPVNAPKC H NNH+DG MNF+HRDEEV   YFP
Sbjct:  286 PLDVTKTWPEDIIPLQPVGRMVLNKNIDNFFAENEQLAFCPAVTVPGIHYSDDKLLQTRIFSYADTQRHRLGPNYLMLPVNAPKCAHHNNHHDGLMNFIHRDEEV--NYFP 394

HSP 2 Score: 44.669 bits (104), Expect = 1.790e-55
Identity = 18/24 (75.00%), Postives = 21/24 (87.50%), Query Frame = 2

Query:   14 HPEWKLYIQTIDPDHEDQFVSDPL 85
            +PEWKL+IQTID DHED+F  DPL
Sbjct:  264 YPEWKLFIQTIDADHEDRFDFDPL 287

[Close]

BLAST of FC868664 vs. ExPASy Swiss-Prot
Match: CATA1_SOYBN (Catalase-1/2 OS=Glycine max GN=CAT1 PE=2 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 3.042e-55
Identity = 87/111 (78.38%), Postives = 97/111 (87.39%), Query Frame = 1

Query:   79 PTDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVLSFYFP 411
            P DVTK WPED++PLQPVGR+VLNKNIDNFFAENE LAF P I+VPG+YYS+DK+LQ R+F+Y DTQRHRLGPNYL LP NAPKC H NNH+DGFMNFMHRDEEV   YFP
Sbjct:  286 PLDVTKTWPEDVLPLQPVGRMVLNKNIDNFFAENEQLAFCPAIIVPGVYYSDDKLLQTRVFSYADTQRHRLGPNYLQLPANAPKCAHHNNHHDGFMNFMHRDEEV--NYFP 394

HSP 2 Score: 41.9726 bits (97), Expect = 3.042e-55
Identity = 16/24 (66.67%), Postives = 21/24 (87.50%), Query Frame = 2

Query:   14 HPEWKLYIQTIDPDHEDQFVSDPL 85
            +PEWKLYIQT+DP++ED+   DPL
Sbjct:  264 YPEWKLYIQTLDPENEDRLDFDPL 287

[Close]

BLAST of FC868664 vs. ExPASy Swiss-Prot
Match: CATA_PHAAU (Catalase OS=Phaseolus aureus PE=2 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 3.042e-55
Identity = 88/111 (79.28%), Postives = 97/111 (87.39%), Query Frame = 1

Query:   79 PTDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVLSFYFP 411
            P DVTK WPEDIIPLQPVGRLVLNKNIDNFFAENE LAF P I+VPG+YYS+DKMLQ RIF+Y D+QRHRLGPNYL+LP NAPK  H NNH++GFMNF+HRDEEV   YFP
Sbjct:  286 PLDVTKTWPEDIIPLQPVGRLVLNKNIDNFFAENEQLAFCPAIIVPGVYYSDDKMLQTRIFSYADSQRHRLGPNYLLLPANAPKSAHHNNHHEGFMNFIHRDEEV--NYFP 394

HSP 2 Score: 46.2098 bits (108), Expect = 3.042e-55
Identity = 18/24 (75.00%), Postives = 22/24 (91.67%), Query Frame = 2

Query:   14 HPEWKLYIQTIDPDHEDQFVSDPL 85
            +PEWKL+IQTIDP+HED+F  DPL
Sbjct:  264 YPEWKLFIQTIDPEHEDKFDFDPL 287

[Close]

BLAST of FC868664 vs. ExPASy Swiss-Prot
Match: CATA3_NICPL (Catalase isozyme 3 OS=Nicotiana plumbaginifolia GN=CAT3 PE=2 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 3.965e-55
Identity = 89/111 (80.18%), Postives = 96/111 (86.49%), Query Frame = 1

Query:   79 PTDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVLSFYFP 411
            P DVTK WPEDI+PLQPVGRLVLNKNIDNFFAENE LAF P IVVPG+Y S+DK+LQ RIF+Y D QRHRLGPNYL LPVNAPKC H NNH++GFMNFMHRDEEV   YFP
Sbjct:  286 PLDVTKTWPEDILPLQPVGRLVLNKNIDNFFAENEQLAFWPAIVVPGVYCSDDKLLQTRIFSYSDAQRHRLGPNYLQLPVNAPKCAHHNNHHEGFMNFMHRDEEV--NYFP 394

HSP 2 Score: 45.4394 bits (106), Expect = 3.965e-55
Identity = 18/24 (75.00%), Postives = 21/24 (87.50%), Query Frame = 2

Query:   14 HPEWKLYIQTIDPDHEDQFVSDPL 85
            +PEWKL+IQ IDPDHED+F  DPL
Sbjct:  264 YPEWKLFIQIIDPDHEDRFDFDPL 287

[Close]

BLAST of FC868664 vs. ExPASy Swiss-Prot
Match: CATA3_SOYBN (Catalase-3 OS=Glycine max GN=CAT3 PE=2 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 5.169e-55
Identity = 87/111 (78.38%), Postives = 97/111 (87.39%), Query Frame = 1

Query:   79 PTDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVLSFYFP 411
            P DVTK WPED++PLQPVGR+VLNKNIDNFFAENE LAF P I+VPG+YYS+DK+LQ RIF+Y DTQRHRLGPNYL LP N+PKC H NNH+DGFMNFMHRDEEV   YFP
Sbjct:  286 PLDVTKTWPEDVLPLQPVGRMVLNKNIDNFFAENEQLAFCPAIIVPGVYYSDDKLLQTRIFSYADTQRHRLGPNYLQLPANSPKCAHHNNHHDGFMNFMHRDEEV--NYFP 394

HSP 2 Score: 41.9726 bits (97), Expect = 5.169e-55
Identity = 16/24 (66.67%), Postives = 21/24 (87.50%), Query Frame = 2

Query:   14 HPEWKLYIQTIDPDHEDQFVSDPL 85
            +PEWKLYIQT+DP++ED+   DPL
Sbjct:  264 YPEWKLYIQTLDPENEDRLDFDPL 287

[Close]

BLAST of FC868664 vs. ExPASy Swiss-Prot
Match: CATA1_NICPL (Catalase isozyme 1 (Fragment) OS=Nicotiana plumbaginifolia GN=CAT1 PE=2 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 8.786e-55
Identity = 88/111 (79.28%), Postives = 94/111 (84.68%), Query Frame = 1

Query:   79 PTDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVLSFYFP 411
            P DVTK WPEDI+PLQPVGRLVLNKNIDNF  ENE LAF P IVVPG+YYS+DKMLQ RIF+Y DTQR+RLGPNYL LP NAPKC H NNHYDG MNFMHRDEE+   YFP
Sbjct:  279 PLDVTKTWPEDILPLQPVGRLVLNKNIDNFSNENEQLAFCPSIVVPGVYYSDDKMLQTRIFSYSDTQRYRLGPNYLQLPANAPKCAHHNNHYDGSMNFMHRDEEI--DYFP 387

HSP 2 Score: 46.595 bits (109), Expect = 8.786e-55
Identity = 18/24 (75.00%), Postives = 22/24 (91.67%), Query Frame = 2

Query:   14 HPEWKLYIQTIDPDHEDQFVSDPL 85
            +PEWKL+IQT+DPDHED+F  DPL
Sbjct:  257 YPEWKLFIQTMDPDHEDRFDFDPL 280

[Close]

BLAST of FC868664 vs. ExPASy Swiss-Prot
Match: CATA2_HORVU (Catalase isozyme 2 OS=Hordeum vulgare GN=CAT2 PE=2 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.946e-54
Identity = 87/111 (78.38%), Postives = 98/111 (88.29%), Query Frame = 1

Query:   79 PTDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVLSFYFP 411
            P D TK WPED++PLQPVGRLVL++N+DNFF ENE LAF PG+VVPGIYYS+DKMLQCR+FAY DTQR+RLGPNYLMLPVNAPKC  +NNHYDG MNFMHRDEEV   Y+P
Sbjct:  286 PLDDTKTWPEDLVPLQPVGRLVLDRNVDNFFNENEQLAFGPGLVVPGIYYSDDKMLQCRVFAYADTQRYRLGPNYLMLPVNAPKCGFKNNHYDGAMNFMHRDEEV--DYYP 394

HSP 2 Score: 41.5874 bits (96), Expect = 1.946e-54
Identity = 16/23 (69.57%), Postives = 19/23 (82.61%), Query Frame = 2

Query:   17 PEWKLYIQTIDPDHEDQFVSDPL 85
            PEWKL++Q IDPD ED+F  DPL
Sbjct:  265 PEWKLFVQVIDPDEEDRFDFDPL 287

[Close]

BLAST of FC868664 vs. ExPASy Swiss-Prot
Match: CATA_SOLAP (Catalase OS=Soldanella alpina PE=2 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 2.537e-54
Identity = 87/111 (78.38%), Postives = 95/111 (85.59%), Query Frame = 1

Query:   79 PTDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVLSFYFP 411
            P DVTK WPEDIIPL PVGRLVLNKNIDNFFAENE LAF P ++VPG+YYS+DK+LQ RIF+Y DTQRHRLGPNYL LP NAPKC H NNH++G MNFMHRDEEV   YFP
Sbjct:  286 PLDVTKTWPEDIIPLMPVGRLVLNKNIDNFFAENEQLAFCPALIVPGVYYSDDKLLQTRIFSYADTQRHRLGPNYLQLPPNAPKCAHHNNHHEGLMNFMHRDEEV--NYFP 394

HSP 2 Score: 43.8986 bits (102), Expect = 2.537e-54
Identity = 17/24 (70.83%), Postives = 21/24 (87.50%), Query Frame = 2

Query:   14 HPEWKLYIQTIDPDHEDQFVSDPL 85
            +PEWKL+IQ I+PDHED+F  DPL
Sbjct:  264 YPEWKLFIQIIEPDHEDKFDFDPL 287

[Close]

BLAST of FC868664 vs. ExPASy Swiss-Prot
Match: CATA_IPOBA (Catalase OS=Ipomoea batatas PE=2 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 3.307e-54
Identity = 84/111 (75.68%), Postives = 96/111 (86.49%), Query Frame = 1

Query:   79 PTDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVLSFYFP 411
            P D TK WPE++IPLQPVGR+VLNKNIDNFFAENEMLA +P  +VPGIY+S+DKMLQ R+FAY DT RHRLGPNY++LPVNAPKC H NN YDG+MNF+HRDEEV   YFP
Sbjct:  286 PLDTTKIWPEELIPLQPVGRMVLNKNIDNFFAENEMLAMDPAHIVPGIYFSDDKMLQARVFAYADTHRHRLGPNYMLLPVNAPKCAHHNNSYDGYMNFVHRDEEV--DYFP 394

HSP 2 Score: 46.2098 bits (108), Expect = 3.307e-54
Identity = 18/24 (75.00%), Postives = 21/24 (87.50%), Query Frame = 2

Query:   14 HPEWKLYIQTIDPDHEDQFVSDPL 85
            +PEWKLYIQ +DPDHED+F  DPL
Sbjct:  264 YPEWKLYIQVMDPDHEDRFDFDPL 287

The following BLAST results are available for this feature:

BLAST of FC868664 vs. ExPASy Swiss-Prot

BLAST of FC868664 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141


Match Name	E-value	Identity	Description
CATA2_WHEAT	1.790e-55	80.18	Catalase OS=Triticum aestivum GN=CATA PE=2 SV=1	[more]
CATA1_HORVU	1.790e-55	80.18	Catalase isozyme 1 OS=Hordeum vulgare GN=CAT1 PE=2...	[more]
CATA1_SOYBN	3.042e-55	78.38	Catalase-1/2 OS=Glycine max GN=CAT1 PE=2 SV=1	[more]
CATA_PHAAU	3.042e-55	79.28	Catalase OS=Phaseolus aureus PE=2 SV=1	[more]
CATA3_NICPL	3.965e-55	80.18	Catalase isozyme 3 OS=Nicotiana plumbaginifolia GN...	[more]
CATA3_SOYBN	5.169e-55	78.38	Catalase-3 OS=Glycine max GN=CAT3 PE=2 SV=1	[more]
CATA1_NICPL	8.786e-55	79.28	Catalase isozyme 1 (Fragment) OS=Nicotiana plumbag...	[more]
CATA2_HORVU	1.946e-54	78.38	Catalase isozyme 2 OS=Hordeum vulgare GN=CAT2 PE=2...	[more]
CATA_SOLAP	2.537e-54	78.38	Catalase OS=Soldanella alpina PE=2 SV=1	[more]
CATA_IPOBA	3.307e-54	75.68	Catalase OS=Ipomoea batatas PE=2 SV=1	[more]

Pages

Properties


Property Name	Value
Genbank description	C31003C03EF AbioticL1 Citrus clementina cDNA clone C31003C03, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>FC868664 ID=FC868664; Name=FC868664; organism=Citrus clementina; type=EST; length=702bp
TTGCAGCTGGAAACATCCTGAGTGGAAACTCTACATTCAGACTATTGATC
CCGATCACGAGGACCAATTTGTCTCTGACCCACTGACGTAACCAAGTGGT
GGCCTGAGGACATCATCCCTCTGCAGCCAGTTGGACGCTTGGTCTTGAAC
AAGAACATCGATAATTTCTTTGCGGAAAATGAAATGCTTGCATTTAACCC
TGGTATCGTGGTTCCTGGGATCTACTACTCAAATGATAAGATGCTCCAAT
GTCGAATCTTTGCCTATGGTGATACCCAGAGGCATCGCCTTGGACCCAAC
TACTTGATGCTTCCAGTTAATGCACCCAAATGTCCTCATCGCAACAATCA
TTATGATGGTTTCATGAATTTCATGCACAGGGATGAGGAGGTACTTAGTT
TCTACTTTCCCCCCTGGAAACAAAATTTATGAATCAAAATAGGCTCGGCA
CCTATAATCTATCCACATTTATCTTAACTTAGATAATGGTGCATGTCTTA
AAGATACAAGTGCTTAGTACAAGTGGATGGTATCAGAATCTAACCTGTTG
TGTGCTAGTGTTATAAAAAAATGCTCTAATTGGATATTATGATGCTTTGT
TTTAGGTCGATTACTTTCCTTCGAGGTATGATCCTACTCGTCATGCTGAG
AGATATCCCATTCCTTCTGATGTAATTACAGGAAGGCGTGAGAAGGCTTG
CA