FC868664

Overview
NameFC868664
Unique NameFC868664
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length702
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868664 vs. ExPASy Swiss-Prot
Match: CATA2_CUCPE (Catalase isozyme 2 OS=Cucurbita pepo GN=CAT2 PE=2 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 1.735e-49
Identity = 87/111 (78.38%), Postives = 96/111 (86.49%), Query Frame = 1
Query:   79 PTDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVLSFYFP 411
            P D T  WPED++PL+PVGRLVLNKNIDNFFAENEMLAF+  +V PGI+YS+DKMLQ R FAY DTQRHRLGPNYL LPVNAPKCPH NNH++GFMNFMHRDEEV   YFP
Sbjct:  286 PLDTTIAWPEDVVPLRPVGRLVLNKNIDNFFAENEMLAFSMSLV-PGIHYSDDKMLQARSFAYADTQRHRLGPNYLQLPVNAPKCPHHNNHHEGFMNFMHRDEEV--NYFP 393          

HSP 2 Score: 32.3426 bits (72), Expect = 1.735e-49
Identity = 12/23 (52.17%), Postives = 18/23 (78.26%), Query Frame = 2
Query:   17 PEWKLYIQTIDPDHEDQFVSDPL 85
            PEW+LYIQTID + ++ +  +PL
Sbjct:  265 PEWRLYIQTIDYEDQNNYDFEPL 287          
BLAST of FC868664 vs. ExPASy Swiss-Prot
Match: CATA_LISIN (Catalase OS=Listeria innocua GN=kat PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 8.621e-32
Identity = 55/105 (52.38%), Postives = 73/105 (69.52%), Query Frame = 1
Query:   79 PTDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEV 393
            P D TK W ED+ P + VG + LN+N DN FAE E + FNPG++V G+  S D++LQ R+F+Y DTQRHR+GPNYL LP+N+PK P  NN  DG+M F  +   +
Sbjct:  276 PLDATKDWFEDVFPYEHVGTMTLNRNPDNIFAETESVGFNPGVLVRGMLPSEDRLLQGRLFSYSDTQRHRVGPNYLQLPINSPKAPVANNQRDGYMPFKQQTSSI 380          

HSP 2 Score: 32.3426 bits (72), Expect = 8.621e-32
Identity = 12/24 (50.00%), Postives = 16/24 (66.67%), Query Frame = 2
Query:   14 HPEWKLYIQTIDPDHEDQFVSDPL 85
            +PEW LY+Q +DP   D F  +PL
Sbjct:  254 YPEWDLYVQVLDPKDLDSFDFNPL 277          
BLAST of FC868664 vs. ExPASy Swiss-Prot
Match: CATA_LISSE (Catalase OS=Listeria seeligeri GN=kat PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.904e-31
Identity = 56/105 (53.33%), Postives = 73/105 (69.52%), Query Frame = 1
Query:   79 PTDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEV 393
            P D TK W ED+ P + VG + LN+N DN FAE E + FNPG++VPG+  S D++LQ R+F+Y DTQRHR+GPNYL LP+N+PK P  NN  DG M F  +   +
Sbjct:  276 PLDATKDWFEDVFPYEHVGTMTLNRNPDNIFAETESVGFNPGVLVPGMLPSEDRVLQGRLFSYSDTQRHRVGPNYLQLPINSPKTPVDNNQRDGQMPFKQQTSSI 380          

HSP 2 Score: 31.187 bits (69), Expect = 1.904e-31
Identity = 11/24 (45.83%), Postives = 16/24 (66.67%), Query Frame = 2
Query:   14 HPEWKLYIQTIDPDHEDQFVSDPL 85
            +PEW LY+Q +DP   D +  +PL
Sbjct:  254 YPEWDLYVQVLDPKDLDNYDFNPL 277          
BLAST of FC868664 vs. ExPASy Swiss-Prot
Match: CATA_LISMO (Catalase OS=Listeria monocytogenes GN=kat PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 9.281e-31
Identity = 54/105 (51.43%), Postives = 72/105 (68.57%), Query Frame = 1
Query:   79 PTDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEV 393
            P D TK W ED+ P + VG + L++N DN FAE E + FNPG++V G+  S D++LQ R+F+Y DTQRHR+GPNYL LP+N+PK P  NN  DG M F  +   +
Sbjct:  276 PLDATKDWFEDVFPYEHVGTMTLDRNPDNIFAETESVGFNPGVLVRGMLPSEDRLLQGRLFSYSDTQRHRVGPNYLQLPINSPKAPVANNQRDGHMPFKQQTSSI 380          

HSP 2 Score: 32.3426 bits (72), Expect = 9.281e-31
Identity = 12/24 (50.00%), Postives = 16/24 (66.67%), Query Frame = 2
Query:   14 HPEWKLYIQTIDPDHEDQFVSDPL 85
            +PEW LY+Q +DP   D F  +PL
Sbjct:  254 YPEWDLYVQVLDPKDLDSFDFNPL 277          
BLAST of FC868664 vs. ExPASy Swiss-Prot
Match: CATE_BACSU (Catalase-2 OS=Bacillus subtilis GN=katE PE=3 SV=2)

HSP 1 Score: 115.931 bits (289), Expect = 2.088e-25
Identity = 51/94 (54.26%), Postives = 71/94 (75.53%), Query Frame = 1
Query:   85 DVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRL-GPNYLMLPVNAPKCPHRNNHYDGF 363
            D TK WPE+++P++ +G++ LN+N DN FAE E +AF+PG VVPGI ++ND +LQ R+F+Y DTQ  RL GPN+  +P+N P CP  NN YDG+
Sbjct:  305 DPTKLWPEELVPVKIIGKMTLNRNQDNVFAETEQVAFHPGNVVPGIDFTNDPLLQGRLFSYTDTQLIRLGGPNFHEIPINRPVCPFHNNQYDGY 398          
BLAST of FC868664 vs. ExPASy Swiss-Prot
Match: CATA_VIBF1 (Catalase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=katA PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.088e-25
Identity = 57/96 (59.38%), Postives = 66/96 (68.75%), Query Frame = 1
Query:   79 PTDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFM 366
            P D+TK WP    PL  VG   LN+N  NFFAE E  AFNP  VVPGI +S DKMLQ R+FAYGD QR+RLG N+  +PVNAP+CP  + H DG M
Sbjct:  274 PFDLTKVWPHKDYPLIEVGEFELNRNPQNFFAEVEQSAFNPANVVPGISFSPDKMLQGRLFAYGDAQRYRLGVNHQHIPVNAPRCPVHSYHRDGAM 369          
BLAST of FC868664 vs. ExPASy Swiss-Prot
Match: CATA_PROMI (Catalase OS=Proteus mirabilis GN=katA PE=1 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 7.935e-25
Identity = 53/96 (55.21%), Postives = 66/96 (68.75%), Query Frame = 1
Query:   79 PTDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFM 366
            P D+TK WP    PL  VG   LN+N DN+F++ E  AF+P  +VPGI +S DKMLQ R+F+YGD  R+RLG N+  +PVNAPKCP  N H DG M
Sbjct:  275 PFDLTKVWPHADYPLMDVGYFELNRNPDNYFSDVEQAAFSPANIVPGISFSPDKMLQGRLFSYGDAHRYRLGVNHHQIPVNAPKCPFHNYHRDGAM 370          
BLAST of FC868664 vs. ExPASy Swiss-Prot
Match: CATE_BACPF (Catalase (Fragment) OS=Bacillus pseudofirmus GN=katE PE=3 SV=2)

HSP 1 Score: 113.235 bits (282), Expect = 1.353e-24
Identity = 51/94 (54.26%), Postives = 70/94 (74.47%), Query Frame = 1
Query:   85 DVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRL-GPNYLMLPVNAPKCPHRNNHYDGF 363
            D TK WPE+ +P++ +G++ LN+N+DN FAE E +AF+PG VVPGI ++ND +LQ R+F+Y DTQ  RL GPN+  LP+N P CP  NN  DG+
Sbjct:  302 DPTKIWPEEEVPVKIIGKMTLNRNVDNVFAETEQVAFHPGHVVPGIDFTNDPLLQGRLFSYTDTQLIRLGGPNFHELPINRPVCPFHNNQRDGY 395          
BLAST of FC868664 vs. ExPASy Swiss-Prot
Match: CATE_ECOLI (Catalase HPII OS=Escherichia coli (strain K12) GN=katE PE=1 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.309e-24
Identity = 54/100 (54.00%), Postives = 73/100 (73.00%), Query Frame = 1
Query:   85 DVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRL-GPNYLMLPVNAPKCPHRNNHYDGFMNFMHR 381
            D TK  PE+++P+Q VG++VLN+N DNFFAENE  AF+PG +VPG+ ++ND +LQ R+F+Y DTQ  RL GPN+  +P+N P CP+ N   DG    MHR
Sbjct:  355 DPTKLIPEELVPVQRVGKMVLNRNPDNFFAENEQAAFHPGHIVPGLDFTNDPLLQGRLFSYTDTQISRLGGPNFHEIPINRPTCPYHNFQRDG----MHR 450          
BLAST of FC868664 vs. ExPASy Swiss-Prot
Match: CATA_MOUSE (Catalase OS=Mus musculus GN=Cat PE=1 SV=3)

HSP 1 Score: 112.464 bits (280), Expect = 2.309e-24
Identity = 63/115 (54.78%), Postives = 75/115 (65.22%), Query Frame = 1
Query:   79 PTDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHR----NNHYDGFMNFMHRDEEVLSFYFP 411
            P D+TK WP    PL PVG+LVLNKN  N+FAE E +AF+P  + PGI  S DKMLQ R+FAY DT RHRLGPNYL +PVN   CP+R    N   DG M  MH ++     Y+P
Sbjct:  296 PFDLTKVWPHKDYPLIPVGKLVLNKNPVNYFAEVEQMAFDPSNMPPGIEPSPDKMLQGRLFAYPDTHRHRLGPNYLQIPVN---CPYRARVANYQRDGPM-CMHDNQGGAPNYYP 406          
The following BLAST results are available for this feature:
BLAST of FC868664 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141
Match NameE-valueIdentityDescription
CATA2_CUCPE1.735e-4978.38Catalase isozyme 2 OS=Cucurbita pepo GN=CAT2 PE=2 ... [more]
CATA_LISIN8.621e-3252.38Catalase OS=Listeria innocua GN=kat PE=3 SV=1[more]
CATA_LISSE1.904e-3153.33Catalase OS=Listeria seeligeri GN=kat PE=3 SV=1[more]
CATA_LISMO9.281e-3151.43Catalase OS=Listeria monocytogenes GN=kat PE=3 SV=... [more]
CATE_BACSU2.088e-2554.26Catalase-2 OS=Bacillus subtilis GN=katE PE=3 SV=2[more]
CATA_VIBF12.088e-2559.38Catalase OS=Vibrio fischeri (strain ATCC 700601 / ... [more]
CATA_PROMI7.935e-2555.21Catalase OS=Proteus mirabilis GN=katA PE=1 SV=1[more]
CATE_BACPF1.353e-2454.26Catalase (Fragment) OS=Bacillus pseudofirmus GN=ka... [more]
CATE_ECOLI2.309e-2454.00Catalase HPII OS=Escherichia coli (strain K12) GN=... [more]
CATA_MOUSE2.309e-2454.78Catalase OS=Mus musculus GN=Cat PE=1 SV=3[more]

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Properties
Property NameValue
Genbank descriptionC31003C03EF AbioticL1 Citrus clementina cDNA clone C31003C03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868664 ID=FC868664; Name=FC868664; organism=Citrus clementina; type=EST; length=702bp
TTGCAGCTGGAAACATCCTGAGTGGAAACTCTACATTCAGACTATTGATC
CCGATCACGAGGACCAATTTGTCTCTGACCCACTGACGTAACCAAGTGGT
GGCCTGAGGACATCATCCCTCTGCAGCCAGTTGGACGCTTGGTCTTGAAC
AAGAACATCGATAATTTCTTTGCGGAAAATGAAATGCTTGCATTTAACCC
TGGTATCGTGGTTCCTGGGATCTACTACTCAAATGATAAGATGCTCCAAT
GTCGAATCTTTGCCTATGGTGATACCCAGAGGCATCGCCTTGGACCCAAC
TACTTGATGCTTCCAGTTAATGCACCCAAATGTCCTCATCGCAACAATCA
TTATGATGGTTTCATGAATTTCATGCACAGGGATGAGGAGGTACTTAGTT
TCTACTTTCCCCCCTGGAAACAAAATTTATGAATCAAAATAGGCTCGGCA
CCTATAATCTATCCACATTTATCTTAACTTAGATAATGGTGCATGTCTTA
AAGATACAAGTGCTTAGTACAAGTGGATGGTATCAGAATCTAACCTGTTG
TGTGCTAGTGTTATAAAAAAATGCTCTAATTGGATATTATGATGCTTTGT
TTTAGGTCGATTACTTTCCTTCGAGGTATGATCCTACTCGTCATGCTGAG
AGATATCCCATTCCTTCTGATGTAATTACAGGAAGGCGTGAGAAGGCTTG
CA
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