FC868664

Overview
NameFC868664
Unique NameFC868664
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length702
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868664 vs. ExPASy Swiss-Prot
Match: CATA_BORPE (Catalase OS=Bordetella pertussis GN=katA PE=1 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.309e-24
Identity = 55/94 (58.51%), Postives = 66/94 (70.21%), Query Frame = 1
Query:   79 PTDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDG 360
            P D+TK WP    PL  VG L LNKN +N+FAE E  AF P  VVPGI +S DKMLQ R+F+YGDT R+RLG N+  +PVNAP+CP  + H DG
Sbjct:  278 PFDLTKVWPHADYPLIEVGVLELNKNPENYFAEVEQAAFTPANVVPGIGFSPDKMLQGRLFSYGDTHRYRLGINHHQIPVNAPRCPFHSFHRDG 371          
BLAST of FC868664 vs. ExPASy Swiss-Prot
Match: CATA_BORPA (Catalase OS=Bordetella parapertussis GN=katA PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.309e-24
Identity = 55/94 (58.51%), Postives = 66/94 (70.21%), Query Frame = 1
Query:   79 PTDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDG 360
            P D+TK WP    PL  VG L LNKN +N+FAE E  AF P  VVPGI +S DKMLQ R+F+YGDT R+RLG N+  +PVNAP+CP  + H DG
Sbjct:  278 PFDLTKVWPHADYPLIEVGVLELNKNPENYFAEVEQAAFTPANVVPGIGFSPDKMLQGRLFSYGDTHRYRLGINHHQIPVNAPRCPFHSFHRDG 371          
BLAST of FC868664 vs. ExPASy Swiss-Prot
Match: CATA_BORBR (Catalase OS=Bordetella bronchiseptica GN=katA PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.309e-24
Identity = 55/94 (58.51%), Postives = 66/94 (70.21%), Query Frame = 1
Query:   79 PTDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDG 360
            P D+TK WP    PL  VG L LNKN +N+FAE E  AF P  VVPGI +S DKMLQ R+F+YGDT R+RLG N+  +PVNAP+CP  + H DG
Sbjct:  278 PFDLTKVWPHADYPLIEVGVLELNKNPENYFAEVEQAAFTPANVVPGIGFSPDKMLQGRLFSYGDTHRYRLGINHHQIPVNAPRCPFHSFHRDG 371          
BLAST of FC868664 vs. ExPASy Swiss-Prot
Match: CATA_RAT (Catalase OS=Rattus norvegicus GN=Cat PE=1 SV=3)

HSP 1 Score: 111.694 bits (278), Expect = 3.938e-24
Identity = 62/115 (53.91%), Postives = 75/115 (65.22%), Query Frame = 1
Query:   79 PTDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHR----NNHYDGFMNFMHRDEEVLSFYFP 411
            P D+TK WP    PL PVG+LVLN+N  N+FAE E +AF+P  + PGI  S DKMLQ R+FAY DT RHRLGPNYL +PVN   CP+R    N   DG M  MH ++     Y+P
Sbjct:  296 PFDLTKVWPHKDYPLIPVGKLVLNRNPANYFAEVEQMAFDPSNMPPGIEPSPDKMLQGRLFAYPDTHRHRLGPNYLQIPVN---CPYRARVANYQRDGPM-CMHDNQGGAPNYYP 406          
BLAST of FC868664 vs. ExPASy Swiss-Prot
Match: CATA_HELPY (Catalase OS=Helicobacter pylori GN=katA PE=1 SV=2)

HSP 1 Score: 111.694 bits (278), Expect = 3.938e-24
Identity = 54/96 (56.25%), Postives = 67/96 (69.79%), Query Frame = 1
Query:   79 PTDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFM 366
            P DVTK W     PL  VG + LNKN +N+FAE E  AF+P  VVPGI YS D+MLQ R+F+YGDT R+RLG NY  +PVN P+CP  ++  DG+M
Sbjct:  277 PFDVTKIWYLQDYPLMEVGIVELNKNPENYFAEVEQAAFSPANVVPGIGYSPDRMLQGRLFSYGDTHRYRLGVNYPQIPVNKPRCPFHSSSRDGYM 372          
BLAST of FC868664 vs. ExPASy Swiss-Prot
Match: CATA_BOVIN (Catalase OS=Bos taurus GN=CAT PE=1 SV=3)

HSP 1 Score: 111.309 bits (277), Expect = 4.070e-24
Identity = 61/113 (53.98%), Postives = 72/113 (63.72%), Query Frame = 1
Query:   79 PTDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHR----NNHYDGFMNFMHRDEEVLSFY 405
            P D+TK WP    PL PVG+LVLN+N  N+FAE E LAF+P  + PGI  S DKMLQ R+FAY DT RHRLGPNYL +PVN   CP+R    N   DG M  M       ++Y
Sbjct:  296 PFDLTKVWPHGDYPLIPVGKLVLNRNPVNYFAEVEQLAFDPSNMPPGIEPSPDKMLQGRLFAYPDTHRHRLGPNYLQIPVN---CPYRARVANYQRDGPMCMMDNQGGAPNYY 405          

HSP 2 Score: 21.1718 bits (43), Expect = 4.070e-24
Identity = 8/23 (34.78%), Postives = 12/23 (52.17%), Query Frame = 2
Query:   14 HPEWKLYIQTIDPDHEDQFVSDP 82
            +P W LYIQ +     + F  +P
Sbjct:  274 YPSWTLYIQVMTFSEAEIFPFNP 296          
BLAST of FC868664 vs. ExPASy Swiss-Prot
Match: CATA2_CAEEL (Catalase-2 OS=Caenorhabditis elegans GN=ctl-1 PE=2 SV=3)

HSP 1 Score: 109.768 bits (273), Expect = 4.075e-24
Identity = 59/115 (51.30%), Postives = 74/115 (64.35%), Query Frame = 1
Query:   79 PTDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHY----DGFMNFMHRDEEVLSFYFP 411
            P DVTK WP    PL  VG++VLN+N+ N+FAE E  AF P  +VPGI +S DKMLQ RIF+Y DT  HRLGPNY+ LPVN   CP+R+  +    DG M +  + +     YFP
Sbjct:  292 PFDVTKVWPHGDYPLIEVGKMVLNRNVKNYFAEVEQAAFCPAHIVPGIEFSPDKMLQGRIFSYTDTHYHRLGPNYIQLPVN---CPYRSRAHTTQRDGAMAYESQGD--APNYFP 401          

HSP 2 Score: 22.7126 bits (47), Expect = 4.075e-24
Identity = 7/22 (31.82%), Postives = 15/22 (68.18%), Query Frame = 2
Query:   17 PEWKLYIQTIDPDHEDQFVSDP 82
            PEWK++IQ +  +  +++  +P
Sbjct:  271 PEWKMFIQVMTFEQAEKWEFNP 292          
BLAST of FC868664 vs. ExPASy Swiss-Prot
Match: CATA_HELPJ (Catalase OS=Helicobacter pylori J99 GN=katA PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.143e-24
Identity = 54/96 (56.25%), Postives = 66/96 (68.75%), Query Frame = 1
Query:   79 PTDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFM 366
            P DVTK W     PL  VG + LNKN +N+FAE E  AF P  VVPGI YS D+MLQ R+F+YGDT R+RLG NY  +PVN P+CP  ++  DG+M
Sbjct:  277 PFDVTKIWYLQDYPLMEVGIVELNKNPENYFAEVEQAAFTPANVVPGIGYSPDRMLQGRLFSYGDTHRYRLGVNYPQIPVNRPRCPFHSSSRDGYM 372          
BLAST of FC868664 vs. ExPASy Swiss-Prot
Match: CATA_DROME (Catalase OS=Drosophila melanogaster GN=Cat PE=1 SV=2)

HSP 1 Score: 109.383 bits (272), Expect = 5.301e-24
Identity = 57/112 (50.89%), Postives = 72/112 (64.29%), Query Frame = 1
Query:   79 PTDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAP-KCPHRNNHYDGFMNFMHRDEEVLSFYFP 411
            P DVTK W +   PL PVG++VL++N  N+FAE E +AF+P  +VPG+  S DKML  R+F+Y DT RHRLGPNYL +PVN P K    N   DG MN     +   + YFP
Sbjct:  294 PFDVTKVWSQKEYPLIPVGKMVLDRNPKNYFAEVEQIAFSPAHLVPGVEPSPDKMLHGRLFSYSDTHRHRLGPNYLQIPVNCPYKVKIENFQRDGAMNVTDNQDGAPN-YFP 404          

HSP 2 Score: 22.7126 bits (47), Expect = 5.301e-24
Identity = 8/24 (33.33%), Postives = 13/24 (54.17%), Query Frame = 2
Query:   11 KHPEWKLYIQTIDPDHEDQFVSDP 82
            K P W +YIQ +  +   +F  +P
Sbjct:  271 KFPSWTMYIQVMTYEQAKKFKYNP 294          
BLAST of FC868664 vs. ExPASy Swiss-Prot
Match: CATA_DEIRA (Catalase OS=Deinococcus radiodurans GN=katA PE=1 SV=2)

HSP 1 Score: 108.997 bits (271), Expect = 6.891e-24
Identity = 51/98 (52.04%), Postives = 67/98 (68.37%), Query Frame = 1
Query:   79 PTDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNF 372
            P D TK WP +  P + VG++ LN+N +N FAE E  AF  G++V G+ +S+DKMLQ R F+Y DTQR+R+GPNYL LP+NAPK     N  DG M +
Sbjct:  307 PLDDTKIWPREQFPWRHVGQMTLNRNPENVFAETEQAAFGTGVLVDGLDFSDDKMLQGRTFSYSDTQRYRVGPNYLQLPINAPKKHVATNQRDGQMAY 404          

HSP 2 Score: 22.7126 bits (47), Expect = 6.891e-24
Identity = 7/23 (30.43%), Postives = 13/23 (56.52%), Query Frame = 2
Query:   17 PEWKLYIQTIDPDHEDQFVSDPL 85
            P+W L++Q ++     +   DPL
Sbjct:  286 PQWDLFVQIMEDGEHPELDFDPL 308          
The following BLAST results are available for this feature:
BLAST of FC868664 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141
Match NameE-valueIdentityDescription
CATA_BORPE2.309e-2458.51Catalase OS=Bordetella pertussis GN=katA PE=1 SV=1[more]
CATA_BORPA2.309e-2458.51Catalase OS=Bordetella parapertussis GN=katA PE=3 ... [more]
CATA_BORBR2.309e-2458.51Catalase OS=Bordetella bronchiseptica GN=katA PE=3... [more]
CATA_RAT3.938e-2453.91Catalase OS=Rattus norvegicus GN=Cat PE=1 SV=3[more]
CATA_HELPY3.938e-2456.25Catalase OS=Helicobacter pylori GN=katA PE=1 SV=2[more]
CATA_BOVIN4.070e-2453.98Catalase OS=Bos taurus GN=CAT PE=1 SV=3[more]
CATA2_CAEEL4.075e-2451.30Catalase-2 OS=Caenorhabditis elegans GN=ctl-1 PE=2... [more]
CATA_HELPJ5.143e-2456.25Catalase OS=Helicobacter pylori J99 GN=katA PE=3 S... [more]
CATA_DROME5.301e-2450.89Catalase OS=Drosophila melanogaster GN=Cat PE=1 SV... [more]
CATA_DEIRA6.891e-2452.04Catalase OS=Deinococcus radiodurans GN=katA PE=1 S... [more]

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Properties
Property NameValue
Genbank descriptionC31003C03EF AbioticL1 Citrus clementina cDNA clone C31003C03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868664 ID=FC868664; Name=FC868664; organism=Citrus clementina; type=EST; length=702bp
TTGCAGCTGGAAACATCCTGAGTGGAAACTCTACATTCAGACTATTGATC
CCGATCACGAGGACCAATTTGTCTCTGACCCACTGACGTAACCAAGTGGT
GGCCTGAGGACATCATCCCTCTGCAGCCAGTTGGACGCTTGGTCTTGAAC
AAGAACATCGATAATTTCTTTGCGGAAAATGAAATGCTTGCATTTAACCC
TGGTATCGTGGTTCCTGGGATCTACTACTCAAATGATAAGATGCTCCAAT
GTCGAATCTTTGCCTATGGTGATACCCAGAGGCATCGCCTTGGACCCAAC
TACTTGATGCTTCCAGTTAATGCACCCAAATGTCCTCATCGCAACAATCA
TTATGATGGTTTCATGAATTTCATGCACAGGGATGAGGAGGTACTTAGTT
TCTACTTTCCCCCCTGGAAACAAAATTTATGAATCAAAATAGGCTCGGCA
CCTATAATCTATCCACATTTATCTTAACTTAGATAATGGTGCATGTCTTA
AAGATACAAGTGCTTAGTACAAGTGGATGGTATCAGAATCTAACCTGTTG
TGTGCTAGTGTTATAAAAAAATGCTCTAATTGGATATTATGATGCTTTGT
TTTAGGTCGATTACTTTCCTTCGAGGTATGATCCTACTCGTCATGCTGAG
AGATATCCCATTCCTTCTGATGTAATTACAGGAAGGCGTGAGAAGGCTTG
CA
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