FC868664

Overview
NameFC868664
Unique NameFC868664
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length702
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868664 vs. ExPASy Swiss-Prot
Match: CATA_PSEAE (Catalase OS=Pseudomonas aeruginosa GN=katA PE=1 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 8.773e-24
Identity = 54/96 (56.25%), Postives = 65/96 (67.71%), Query Frame = 1
Query:   79 PTDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFM 366
            P D+TK WP    PL  VG   LN+N DN+FAE E  AF P  VVPGI +S DKMLQ R+F+YGD  R+RLG N+  +PVNA +CPH+  H DG M
Sbjct:  276 PFDLTKVWPHGDYPLIEVGFFELNRNPDNYFAEVEQAAFTPANVVPGIGFSPDKMLQGRLFSYGDAHRYRLGVNHHQIPVNAARCPHQVYHRDGGM 371          
BLAST of FC868664 vs. ExPASy Swiss-Prot
Match: CATE_PSEAE (Catalase HPII OS=Pseudomonas aeruginosa GN=katE PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 8.925e-24
Identity = 51/92 (55.43%), Postives = 68/92 (73.91%), Query Frame = 1
Query:   85 DVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRL-GPNYLMLPVNAPKCPHRNNHYD 357
            D TK  PE+++P++ VGR+VLN+N DNFFAE E +AF+ G VVPGI ++ND +LQ R+F+Y DTQ  RL GPN+  +P+N P CP  NN  D
Sbjct:  317 DPTKLVPEELVPVRVVGRMVLNRNPDNFFAETEQVAFHVGHVVPGIDFTNDPLLQGRLFSYTDTQLLRLSGPNFNEIPINRPLCPFHNNQRD 408          

HSP 2 Score: 25.0238 bits (53), Expect = 8.925e-24
Identity = 10/24 (41.67%), Postives = 15/24 (62.50%), Query Frame = 2
Query:   14 HPEWKLYIQTIDPDHEDQFVSDPL 85
            +PEW+L +Q I  + +D F  D L
Sbjct:  293 YPEWELGLQVIPENQQDSFDFDLL 316          
BLAST of FC868664 vs. ExPASy Swiss-Prot
Match: CATX_BACSU (Catalase X OS=Bacillus subtilis GN=katX PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 8.964e-24
Identity = 49/98 (50.00%), Postives = 67/98 (68.37%), Query Frame = 1
Query:   79 PTDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNF 372
            P D TK W +D  P +P+G+LVLNKN +N+ AE E  +F  G++V G+ +S+DK+LQ R FAY DTQR+R+G NYL LP+N+PK     N   G M +
Sbjct:  309 PLDPTKLWYKDDFPWKPIGKLVLNKNPENYHAEVEQASFGTGVLVDGLDFSDDKLLQGRTFAYSDTQRYRVGANYLQLPINSPKKHVATNQEGGQMQY 406          

HSP 2 Score: 26.1794 bits (56), Expect = 8.964e-24
Identity = 9/24 (37.50%), Postives = 14/24 (58.33%), Query Frame = 2
Query:   14 HPEWKLYIQTIDPDHEDQFVSDPL 85
            +PEW++Y Q +  D   +   DPL
Sbjct:  287 YPEWEVYAQIMSDDEHPELDFDPL 310          
BLAST of FC868664 vs. ExPASy Swiss-Prot
Match: CATA_PONAB (Catalase OS=Pongo abelii GN=CAT PE=2 SV=3)

HSP 1 Score: 108.227 bits (269), Expect = 1.167e-23
Identity = 54/88 (61.36%), Postives = 64/88 (72.73%), Query Frame = 1
Query:   79 PTDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHR 342
            P D+TK WP    PL PVG+LVLN+N  N+FAE E +AF+P  + PGI  S DKMLQ R+FAY DT RHRLGPNYL +PVN   CP+R
Sbjct:  296 PFDLTKVWPHKDYPLIPVGKLVLNRNPVNYFAEVEQIAFDPSNMPPGIEASPDKMLQGRLFAYPDTHRHRLGPNYLHIPVN---CPYR 380          

HSP 2 Score: 22.7126 bits (47), Expect = 1.167e-23
Identity = 8/24 (33.33%), Postives = 13/24 (54.17%), Query Frame = 2
Query:   11 KHPEWKLYIQTIDPDHEDQFVSDP 82
            K+P W  YIQ +  +  + F  +P
Sbjct:  273 KYPSWTFYIQVMTFNQAETFPFNP 296          
BLAST of FC868664 vs. ExPASy Swiss-Prot
Match: CATA_HUMAN (Catalase OS=Homo sapiens GN=CAT PE=1 SV=3)

HSP 1 Score: 108.227 bits (269), Expect = 1.167e-23
Identity = 54/88 (61.36%), Postives = 64/88 (72.73%), Query Frame = 1
Query:   79 PTDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHR 342
            P D+TK WP    PL PVG+LVLN+N  N+FAE E +AF+P  + PGI  S DKMLQ R+FAY DT RHRLGPNYL +PVN   CP+R
Sbjct:  296 PFDLTKVWPHKDYPLIPVGKLVLNRNPVNYFAEVEQIAFDPSNMPPGIEASPDKMLQGRLFAYPDTHRHRLGPNYLHIPVN---CPYR 380          

HSP 2 Score: 22.7126 bits (47), Expect = 1.167e-23
Identity = 8/24 (33.33%), Postives = 13/24 (54.17%), Query Frame = 2
Query:   11 KHPEWKLYIQTIDPDHEDQFVSDP 82
            K+P W  YIQ +  +  + F  +P
Sbjct:  273 KYPSWTFYIQVMTFNQAETFPFNP 296          
BLAST of FC868664 vs. ExPASy Swiss-Prot
Match: CATB_PSESY (Catalase OS=Pseudomonas syringae pv. syringae GN=katB PE=1 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 1.520e-23
Identity = 50/100 (50.00%), Postives = 66/100 (66.00%), Query Frame = 1
Query:   79 PTDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMH 378
            P D TK WP+  +P + +G++VLNKN+DNFF E E +A  P  +VPGI  S D++LQ R+F+Y DTQ +RLG   L LPVN PK    N + DG +N  H
Sbjct:  298 PLDATKIWPD--VPEKKIGQMVLNKNVDNFFQETEQVAMAPANLVPGIEPSEDRLLQGRVFSYADTQMYRLGAIGLSLPVNQPKVAVNNGNQDGALNTGH 395          

HSP 2 Score: 28.1054 bits (61), Expect = 1.520e-23
Identity = 10/23 (43.48%), Postives = 15/23 (65.22%), Query Frame = 2
Query:   17 PEWKLYIQTIDPDHEDQFVSDPL 85
            P+W LY+Q + P+   +F  DPL
Sbjct:  277 PKWDLYVQVLKPEELAKFDFDPL 299          
BLAST of FC868664 vs. ExPASy Swiss-Prot
Match: CATA_BACFR (Catalase OS=Bacteroides fragilis GN=katA PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.954e-23
Identity = 54/96 (56.25%), Postives = 65/96 (67.71%), Query Frame = 1
Query:   79 PTDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFM 366
            P D+TK WP    PLQ VG L LN+N +N+FAE E  AFNP  +V GI +S DKMLQ R+F+YGD QR+RLG N   +PVN P+CP    H DG M
Sbjct:  275 PFDLTKVWPHKDFPLQDVGILELNRNPENYFAEVEQSAFNPMNIVEGIGFSPDKMLQGRLFSYGDAQRYRLGVNSEQIPVNKPRCPFHAFHRDGAM 370          
BLAST of FC868664 vs. ExPASy Swiss-Prot
Match: CATA_CAVPO (Catalase OS=Cavia porcellus GN=CAT PE=2 SV=4)

HSP 1 Score: 108.612 bits (270), Expect = 1.976e-23
Identity = 54/88 (61.36%), Postives = 64/88 (72.73%), Query Frame = 1
Query:   79 PTDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHR 342
            P D+TK WP    PL PVG+LVLN+N  N+FAE E +AF+P  + PGI  S DKMLQ R+FAY DT RHRLGPNYL +PVN   CP+R
Sbjct:  296 PFDLTKIWPHKDYPLIPVGKLVLNRNPVNYFAEVEQIAFDPSNMPPGIEPSPDKMLQGRLFAYPDTHRHRLGPNYLQIPVN---CPYR 380          

HSP 2 Score: 21.557 bits (44), Expect = 1.976e-23
Identity = 8/23 (34.78%), Postives = 11/23 (47.83%), Query Frame = 2
Query:   14 HPEWKLYIQTIDPDHEDQFVSDP 82
            +P W LYIQ +       F  +P
Sbjct:  274 YPSWTLYIQVMTFQQAQSFPFNP 296          
BLAST of FC868664 vs. ExPASy Swiss-Prot
Match: CATA_SCHPO (Catalase OS=Schizosaccharomyces pombe GN=cta1 PE=1 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.977e-23
Identity = 51/95 (53.68%), Postives = 63/95 (66.32%), Query Frame = 1
Query:   85 DVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMN 369
            D+TK WP   +P+Q VGR  LN+N  NFFA+ E   F+P  +VPGI  S D +LQ R F+Y DT RHRLG N+  +PVN+PKCP  N   DG MN
Sbjct:  284 DLTKVWPHKDVPMQRVGRFTLNQNPTNFFADIEQAGFSPSHMVPGIEVSADPVLQVRTFSYPDTHRHRLGANFEQIPVNSPKCPVFNYSRDGPMN 378          

HSP 2 Score: 23.8682 bits (50), Expect = 1.977e-23
Identity = 6/19 (31.58%), Postives = 12/19 (63.16%), Query Frame = 2
Query:   14 HPEWKLYIQTIDPDHEDQF 70
            +P W LY+Q + P   +++
Sbjct:  260 YPSWTLYVQVMTPQEAEKY 278          
BLAST of FC868664 vs. ExPASy Swiss-Prot
Match: CATA_CALJA (Catalase OS=Callithrix jacchus GN=CAT PE=2 SV=3)

HSP 1 Score: 108.997 bits (271), Expect = 2.552e-23
Identity = 54/88 (61.36%), Postives = 64/88 (72.73%), Query Frame = 1
Query:   79 PTDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHR 342
            P DVTK WP    PL PVG+LVLN+N  N+FAE E +AF+P  + PGI  S DKMLQ R+F+Y DT RHRLGPNYL +PVN   CP+R
Sbjct:  296 PFDVTKIWPHKDYPLIPVGKLVLNRNPVNYFAEVEQIAFDPSNMPPGIEASPDKMLQGRLFSYPDTHRHRLGPNYLQIPVN---CPYR 380          
The following BLAST results are available for this feature:
BLAST of FC868664 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141
Match NameE-valueIdentityDescription
CATA_PSEAE8.773e-2456.25Catalase OS=Pseudomonas aeruginosa GN=katA PE=1 SV... [more]
CATE_PSEAE8.925e-2455.43Catalase HPII OS=Pseudomonas aeruginosa GN=katE PE... [more]
CATX_BACSU8.964e-2450.00Catalase X OS=Bacillus subtilis GN=katX PE=3 SV=1[more]
CATA_PONAB1.167e-2361.36Catalase OS=Pongo abelii GN=CAT PE=2 SV=3[more]
CATA_HUMAN1.167e-2361.36Catalase OS=Homo sapiens GN=CAT PE=1 SV=3[more]
CATB_PSESY1.520e-2350.00Catalase OS=Pseudomonas syringae pv. syringae GN=k... [more]
CATA_BACFR1.954e-2356.25Catalase OS=Bacteroides fragilis GN=katA PE=1 SV=1[more]
CATA_CAVPO1.976e-2361.36Catalase OS=Cavia porcellus GN=CAT PE=2 SV=4[more]
CATA_SCHPO1.977e-2353.68Catalase OS=Schizosaccharomyces pombe GN=cta1 PE=1... [more]
CATA_CALJA2.552e-2361.36Catalase OS=Callithrix jacchus GN=CAT PE=2 SV=3[more]

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Properties
Property NameValue
Genbank descriptionC31003C03EF AbioticL1 Citrus clementina cDNA clone C31003C03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868664 ID=FC868664; Name=FC868664; organism=Citrus clementina; type=EST; length=702bp
TTGCAGCTGGAAACATCCTGAGTGGAAACTCTACATTCAGACTATTGATC
CCGATCACGAGGACCAATTTGTCTCTGACCCACTGACGTAACCAAGTGGT
GGCCTGAGGACATCATCCCTCTGCAGCCAGTTGGACGCTTGGTCTTGAAC
AAGAACATCGATAATTTCTTTGCGGAAAATGAAATGCTTGCATTTAACCC
TGGTATCGTGGTTCCTGGGATCTACTACTCAAATGATAAGATGCTCCAAT
GTCGAATCTTTGCCTATGGTGATACCCAGAGGCATCGCCTTGGACCCAAC
TACTTGATGCTTCCAGTTAATGCACCCAAATGTCCTCATCGCAACAATCA
TTATGATGGTTTCATGAATTTCATGCACAGGGATGAGGAGGTACTTAGTT
TCTACTTTCCCCCCTGGAAACAAAATTTATGAATCAAAATAGGCTCGGCA
CCTATAATCTATCCACATTTATCTTAACTTAGATAATGGTGCATGTCTTA
AAGATACAAGTGCTTAGTACAAGTGGATGGTATCAGAATCTAACCTGTTG
TGTGCTAGTGTTATAAAAAAATGCTCTAATTGGATATTATGATGCTTTGT
TTTAGGTCGATTACTTTCCTTCGAGGTATGATCCTACTCGTCATGCTGAG
AGATATCCCATTCCTTCTGATGTAATTACAGGAAGGCGTGAGAAGGCTTG
CA
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