FC868664

Overview
NameFC868664
Unique NameFC868664
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length702
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868664 vs. ExPASy Swiss-Prot
Match: CATA_CANFA (Catalase OS=Canis familiaris GN=CAT PE=1 SV=3)

HSP 1 Score: 108.612 bits (270), Expect = 3.334e-23
Identity = 57/110 (51.82%), Postives = 70/110 (63.64%), Query Frame = 1
Query:   79 PTDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAP-KCPHRNNHYDGFMNFMHRDEEVLSFY 405
            P D+TK WP    PL PVG+LVLN+N  N+FAE E +AF+P  + PGI  S DKMLQ R+FAY DT RHRLGPNYL +PVN P +    N   DG M  +       ++Y
Sbjct:  296 PFDLTKIWPHQDYPLIPVGKLVLNRNPVNYFAEVEQMAFDPSNMPPGIEPSPDKMLQGRLFAYPDTHRHRLGPNYLQIPVNCPFRARVANYQRDGPMCMLDNQGGAPNYY 405          
BLAST of FC868664 vs. ExPASy Swiss-Prot
Match: CATA_METBF (Catalase OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=kat PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.354e-23
Identity = 53/95 (55.79%), Postives = 65/95 (68.42%), Query Frame = 1
Query:   85 DVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPK-CPHRNNHYDGFM 366
            D+TK WP    P   +G+LVLN+N  N+FAE E  AF+P  +VPGI  S DKMLQ R+F+Y DT  HRLGPNY ++PVNAPK  P  +   DGFM
Sbjct:  281 DITKVWPHGDFPTMKIGKLVLNRNPTNYFAEVEQAAFSPANLVPGIGISPDKMLQGRVFSYHDTHIHRLGPNYNLIPVNAPKYSPENSYQRDGFM 375          
BLAST of FC868664 vs. ExPASy Swiss-Prot
Match: CATA_CAMJE (Catalase OS=Campylobacter jejuni GN=katA PE=1 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 5.686e-23
Identity = 50/98 (51.02%), Postives = 65/98 (66.33%), Query Frame = 1
Query:   79 PTDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNF 372
            P D+TK WP  ++PL  +G ++LNKN  N+F E E  AF+P  +VPGI +S DKMLQ RIF+Y D QR+R+G NY +LPVN  K      +  G MNF
Sbjct:  272 PFDLTKIWPHSLVPLMDIGEMILNKNPQNYFNEVEQAAFSPSNIVPGIGFSPDKMLQARIFSYPDAQRYRIGTNYHLLPVNRAKSEVNTYNVAGAMNF 369          
BLAST of FC868664 vs. ExPASy Swiss-Prot
Match: CATA_BRUME (Catalase OS=Brucella melitensis GN=katA PE=3 SV=2)

HSP 1 Score: 107.457 bits (267), Expect = 7.427e-23
Identity = 51/97 (52.58%), Postives = 64/97 (65.98%), Query Frame = 1
Query:   79 PTDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMN 369
            P D+TK WP    P   +G + LN+N +N+F E E  AF+P  +VPGI +S DKMLQ RIF+Y D  RHRLG +Y  +PVN PKCP  + H DG MN
Sbjct:  275 PFDLTKVWPHADYPPIDIGVMELNRNPENYFTEVENAAFSPSNIVPGIGFSPDKMLQARIFSYADAHRHRLGTHYESIPVNQPKCPVHHYHRDGQMN 371          
BLAST of FC868664 vs. ExPASy Swiss-Prot
Match: CATA_BRUAB (Catalase OS=Brucella abortus GN=katA PE=1 SV=2)

HSP 1 Score: 107.457 bits (267), Expect = 7.427e-23
Identity = 51/97 (52.58%), Postives = 64/97 (65.98%), Query Frame = 1
Query:   79 PTDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMN 369
            P D+TK WP    P   +G + LN+N +N+F E E  AF+P  +VPGI +S DKMLQ RIF+Y D  RHRLG +Y  +PVN PKCP  + H DG MN
Sbjct:  275 PFDLTKVWPHADYPPIDIGVMELNRNPENYFTEVENAAFSPSNIVPGIGFSPDKMLQARIFSYADAHRHRLGTHYESIPVNQPKCPVHHYHRDGQMN 371          
BLAST of FC868664 vs. ExPASy Swiss-Prot
Match: CATA_ASCSU (Catalase OS=Ascaris suum GN=CAT PE=2 SV=2)

HSP 1 Score: 107.457 bits (267), Expect = 7.427e-23
Identity = 53/93 (56.99%), Postives = 66/93 (70.97%), Query Frame = 1
Query:   79 PTDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYD 357
            P D+TK W     PL  VG++VLNKN  N+FAE E +AF P  VVPGI +S DKMLQ R+FAY DTQ HRLGPNY+ LP+N   CP+R+  ++
Sbjct:  295 PFDITKVWSHKEFPLILVGKIVLNKNPTNYFAEVEQIAFAPSHVVPGIEFSPDKMLQGRLFAYPDTQFHRLGPNYVQLPIN---CPYRSRAHN 384          
BLAST of FC868664 vs. ExPASy Swiss-Prot
Match: CATA_DESVM (Catalase OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=katA PE=3 SV=2)

HSP 1 Score: 107.071 bits (266), Expect = 9.699e-23
Identity = 53/96 (55.21%), Postives = 66/96 (68.75%), Query Frame = 1
Query:   79 PTDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFM 366
            P D+TK W     PL  VG L LN+N +N+FAE E  AFNP  VVPGI +S DKMLQ R+F+YGD  R+RLG N+ ++PVNA +CP  + H DG M
Sbjct:  275 PFDLTKVWFHKDCPLIEVGVLELNRNPENYFAEVEQAAFNPANVVPGISFSPDKMLQGRLFSYGDAHRYRLGVNHHLIPVNAARCPVHSYHRDGAM 370          
BLAST of FC868664 vs. ExPASy Swiss-Prot
Match: CATA1_CAEEL (Peroxisomal catalase 1 OS=Caenorhabditis elegans GN=ctl-2 PE=2 SV=3)

HSP 1 Score: 107.071 bits (266), Expect = 9.699e-23
Identity = 57/102 (55.88%), Postives = 67/102 (65.69%), Query Frame = 1
Query:   79 PTDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHR----NNHYDGFMNF 372
            P DVTK WP    PL  VG++VLN+N  N+FAE E  AF P  +VPGI +S DKMLQ RIF+Y DT  HRLGPNY+ LPVN   CP+R    N   DG M +
Sbjct:  292 PFDVTKVWPHGDYPLIEVGKMVLNRNPRNYFAEVEQSAFCPAHIVPGIEFSPDKMLQGRIFSYTDTHFHRLGPNYIQLPVN---CPYRSRAHNTQRDGAMAY 390          
BLAST of FC868664 vs. ExPASy Swiss-Prot
Match: CATA_RANRU (Catalase OS=Rana rugosa GN=cat PE=2 SV=3)

HSP 1 Score: 106.686 bits (265), Expect = 1.248e-22
Identity = 57/99 (57.58%), Postives = 66/99 (66.67%), Query Frame = 1
Query:   79 PTDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAP-KCPHRNNHYDGFMNF 372
            P D+TK WP    PL PVG+LVLN+N  N+FAE E +AF+P  + PGI  S DKMLQ R+F+Y DT RHRLG NYL LPVN P K    N   DG M F
Sbjct:  296 PFDLTKIWPHKDYPLIPVGKLVLNRNPANYFAEVEQIAFDPSNMPPGIEPSPDKMLQGRLFSYPDTHRHRLGANYLQLPVNCPYKARVANYQRDGPMCF 394          

HSP 2 Score: 20.7866 bits (42), Expect = 1.248e-22
Identity = 6/23 (26.09%), Postives = 13/23 (56.52%), Query Frame = 2
Query:   14 HPEWKLYIQTIDPDHEDQFVSDP 82
            +P W  YIQ +  +  +++  +P
Sbjct:  274 YPSWTFYIQVMTFEQAERYPFNP 296          
BLAST of FC868664 vs. ExPASy Swiss-Prot
Match: CATE_PSEPU (Catalase HPII OS=Pseudomonas putida GN=katE PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 1.615e-22
Identity = 49/92 (53.26%), Postives = 68/92 (73.91%), Query Frame = 1
Query:   85 DVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRL-GPNYLMLPVNAPKCPHRNNHYD 357
            D TK  PE+++P+ P+G++VLN+N DNFFAE E +AF PG +VPGI ++ND +LQ R+F+Y DTQ  RL GPN+  +P+N P  P+ NN  D
Sbjct:  319 DPTKIIPEELVPVTPLGKMVLNRNPDNFFAEVEQVAFCPGHIVPGIDFTNDPLLQGRLFSYTDTQISRLGGPNFHQIPINRPVAPNHNNQRD 410          

HSP 2 Score: 21.9422 bits (45), Expect = 1.615e-22
Identity = 9/24 (37.50%), Postives = 14/24 (58.33%), Query Frame = 2
Query:   14 HPEWKLYIQTIDPDHEDQFVSDPL 85
            +PEW+L +Q +    E +F  D L
Sbjct:  295 YPEWELGVQIVPEADEHKFDFDLL 318          
The following BLAST results are available for this feature:
BLAST of FC868664 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141
Match NameE-valueIdentityDescription
CATA_CANFA3.334e-2351.82Catalase OS=Canis familiaris GN=CAT PE=1 SV=3[more]
CATA_METBF4.354e-2355.79Catalase OS=Methanosarcina barkeri (strain Fusaro ... [more]
CATA_CAMJE5.686e-2351.02Catalase OS=Campylobacter jejuni GN=katA PE=1 SV=1[more]
CATA_BRUME7.427e-2352.58Catalase OS=Brucella melitensis GN=katA PE=3 SV=2[more]
CATA_BRUAB7.427e-2352.58Catalase OS=Brucella abortus GN=katA PE=1 SV=2[more]
CATA_ASCSU7.427e-2356.99Catalase OS=Ascaris suum GN=CAT PE=2 SV=2[more]
CATA_DESVM9.699e-2355.21Catalase OS=Desulfovibrio vulgaris (strain Miyazak... [more]
CATA1_CAEEL9.699e-2355.88Peroxisomal catalase 1 OS=Caenorhabditis elegans G... [more]
CATA_RANRU1.248e-2257.58Catalase OS=Rana rugosa GN=cat PE=2 SV=3[more]
CATE_PSEPU1.615e-2253.26Catalase HPII OS=Pseudomonas putida GN=katE PE=3 S... [more]

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Properties
Property NameValue
Genbank descriptionC31003C03EF AbioticL1 Citrus clementina cDNA clone C31003C03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868664 ID=FC868664; Name=FC868664; organism=Citrus clementina; type=EST; length=702bp
TTGCAGCTGGAAACATCCTGAGTGGAAACTCTACATTCAGACTATTGATC
CCGATCACGAGGACCAATTTGTCTCTGACCCACTGACGTAACCAAGTGGT
GGCCTGAGGACATCATCCCTCTGCAGCCAGTTGGACGCTTGGTCTTGAAC
AAGAACATCGATAATTTCTTTGCGGAAAATGAAATGCTTGCATTTAACCC
TGGTATCGTGGTTCCTGGGATCTACTACTCAAATGATAAGATGCTCCAAT
GTCGAATCTTTGCCTATGGTGATACCCAGAGGCATCGCCTTGGACCCAAC
TACTTGATGCTTCCAGTTAATGCACCCAAATGTCCTCATCGCAACAATCA
TTATGATGGTTTCATGAATTTCATGCACAGGGATGAGGAGGTACTTAGTT
TCTACTTTCCCCCCTGGAAACAAAATTTATGAATCAAAATAGGCTCGGCA
CCTATAATCTATCCACATTTATCTTAACTTAGATAATGGTGCATGTCTTA
AAGATACAAGTGCTTAGTACAAGTGGATGGTATCAGAATCTAACCTGTTG
TGTGCTAGTGTTATAAAAAAATGCTCTAATTGGATATTATGATGCTTTGT
TTTAGGTCGATTACTTTCCTTCGAGGTATGATCCTACTCGTCATGCTGAG
AGATATCCCATTCCTTCTGATGTAATTACAGGAAGGCGTGAGAAGGCTTG
CA
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