FC868664

Overview
NameFC868664
Unique NameFC868664
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length702
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868664 vs. ExPASy Swiss-Prot
Match: CATE_RHIME (Catalase C OS=Rhizobium meliloti GN=katE PE=2 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 1.615e-22
Identity = 51/95 (53.68%), Postives = 67/95 (70.53%), Query Frame = 1
Query:   85 DVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLG-PNYLMLPVNAPKCPHRNNHYDGFM 366
            D TK  PE+++P +PVGRLVL++  +NFFAE E +AF    V PGI +S+D +LQ R F+Y DTQ  RLG PN+  LP+NAPKCP ++   DG M
Sbjct:  315 DPTKIIPEEVLPTKPVGRLVLDRMPENFFAETEQVAFMTQNVPPGIDFSDDPLLQGRNFSYLDTQLKRLGSPNFTHLPINAPKCPFQHFQQDGHM 409          

HSP 2 Score: 27.7202 bits (60), Expect = 1.615e-22
Identity = 12/27 (44.44%), Postives = 15/27 (55.56%), Query Frame = 2
Query:    5 SWKHPEWKLYIQTIDPDHEDQFVSDPL 85
            S   PEW L++Q  D D  D+F  D L
Sbjct:  288 SGNFPEWDLHVQLFDQDFADKFDFDIL 314          
BLAST of FC868664 vs. ExPASy Swiss-Prot
Match: CATE_MYCAV (Catalase HPII OS=Mycobacterium avium GN=katE PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.101e-22
Identity = 55/109 (50.46%), Postives = 71/109 (65.14%), Query Frame = 1
Query:   85 DVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRL-GPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVLSFYF 408
            D TK  PE+ +P+ PVG++VLN+N DNFFAE E +AF+   VVPGI ++ND +LQ R F+Y DTQ  RL GPN+  LPVN P    R N +DG+    H   +  S YF
Sbjct:  305 DATKIIPEEQVPVLPVGKMVLNRNPDNFFAETEQVAFHTANVVPGIDFTNDPLLQFRNFSYLDTQLIRLGGPNFAQLPVNRPVAQVRTNQHDGYA--QHAIPQGRSSYF 411          

HSP 2 Score: 24.6386 bits (52), Expect = 2.101e-22
Identity = 11/27 (40.74%), Postives = 16/27 (59.26%), Query Frame = 2
Query:    5 SWKHPEWKLYIQTIDPDHEDQFVSDPL 85
            S ++PEW+L +Q +  D E  F  D L
Sbjct:  278 SGQYPEWELGVQLVAEDDEFSFDFDLL 304          
BLAST of FC868664 vs. ExPASy Swiss-Prot
Match: CATA_PIG (Catalase OS=Sus scrofa GN=CAT PE=1 SV=4)

HSP 1 Score: 105.531 bits (262), Expect = 2.822e-22
Identity = 56/110 (50.91%), Postives = 68/110 (61.82%), Query Frame = 1
Query:   79 PTDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAP-KCPHRNNHYDGFMNFMHRDEEVLSFY 405
            P D+TK WP    PL PVG+LVLN+N  N+FAE E +AF+P  + PGI  S DKMLQ R+F Y DT RHRLG NYL +PVN P +    N   DG M F        ++Y
Sbjct:  296 PFDLTKVWPHSEYPLIPVGKLVLNRNPVNYFAEVEQMAFDPSNMPPGIEPSPDKMLQGRLFGYPDTHRHRLGANYLQIPVNCPFRARVANYQRDGPMCFQDNQGGAPNYY 405          
BLAST of FC868664 vs. ExPASy Swiss-Prot
Match: CATA_DANRE (Catalase OS=Danio rerio GN=cat PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.822e-22
Identity = 61/115 (53.04%), Postives = 72/115 (62.61%), Query Frame = 1
Query:   79 PTDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHR----NNHYDGFMNFMHRDEEVLSFYFP 411
            P D+TK W     PL PVGR VLN+N  N+FAE E LAF+P  + PGI  S DKMLQ R+F+Y DT RHRLG NYL LPVN   CP+R    N   DG M  MH ++     Y+P
Sbjct:  296 PFDLTKVWSHKEFPLIPVGRFVLNRNPVNYFAEVEQLAFDPSNMPPGIEPSPDKMLQGRLFSYPDTHRHRLGANYLQLPVN---CPYRTRVANYQRDGPM-CMHDNQGGAPNYYP 406          
BLAST of FC868664 vs. ExPASy Swiss-Prot
Match: CATB_PSEAE (Catalase OS=Pseudomonas aeruginosa GN=katB PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 3.577e-22
Identity = 49/100 (49.00%), Postives = 65/100 (65.00%), Query Frame = 1
Query:   79 PTDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMH 378
            P D TK WP   IP + +G++VLN+N+DNFF E E +A  P  +VPGI  S D++LQ R+FAY DTQ +R+G N L LPVN P+      + DG +N  H
Sbjct:  301 PLDATKIWPG--IPERKIGQMVLNRNVDNFFQETEQVAMAPSNLVPGIEPSEDRLLQGRLFAYADTQMYRVGANGLGLPVNRPRSEVNTVNQDGALNAGH 398          

HSP 2 Score: 28.1054 bits (61), Expect = 3.577e-22
Identity = 11/23 (47.83%), Postives = 15/23 (65.22%), Query Frame = 2
Query:   17 PEWKLYIQTIDPDHEDQFVSDPL 85
            P+W LYIQ + P+   +F  DPL
Sbjct:  280 PKWDLYIQVLKPEDLAKFDFDPL 302          
BLAST of FC868664 vs. ExPASy Swiss-Prot
Match: CATA_ASPFU (Catalase A OS=Aspergillus fumigatus GN=catA PE=3 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 4.622e-22
Identity = 51/109 (46.79%), Postives = 71/109 (65.14%), Query Frame = 1
Query:   85 DVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVLSFYFP 411
            D TK WPED++PL+ +G L LN+N+D FF + E +AF    +VPGI +++D +LQ R F+Y DTQ  RLG N+  LP+N P CP  N++ DG M   HR  +    Y+P
Sbjct:  320 DATKIWPEDLVPLRVIGELELNRNVDEFFPQTEQVAFCTSHIVPGIDFTDDPLLQGRNFSYFDTQISRLGINWEELPINRPVCPVLNHNRDGQMR--HRITQGTVNYWP 426          

HSP 2 Score: 22.7126 bits (47), Expect = 4.622e-22
Identity = 9/24 (37.50%), Postives = 13/24 (54.17%), Query Frame = 2
Query:   14 HPEWKLYIQTIDPDHEDQFVSDPL 85
            +P+W   IQ I  + +D F  D L
Sbjct:  296 YPKWDFAIQVIPEEKQDDFEFDIL 319          
BLAST of FC868664 vs. ExPASy Swiss-Prot
Match: CATA_RHIME (Catalase A OS=Rhizobium meliloti GN=katA PE=3 SV=2)

HSP 1 Score: 104.76 bits (260), Expect = 4.814e-22
Identity = 50/97 (51.55%), Postives = 65/97 (67.01%), Query Frame = 1
Query:   79 PTDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMN 369
            P D+TK WP    P   +G L LN+N +N+FAE E  AF+P  +VPGI +S DK+LQ RIF+Y D  R+RLG +Y  +PVN P+CP  + H DG MN
Sbjct:  275 PFDLTKVWPHADYPPVEIGVLELNRNPENYFAEIENAAFSPSNIVPGIGFSPDKVLQARIFSYADAHRYRLGTHYEHIPVNQPRCPVHHYHRDGQMN 371          
BLAST of FC868664 vs. ExPASy Swiss-Prot
Match: CATA_BRUSU (Catalase OS=Brucella suis GN=katA PE=3 SV=3)

HSP 1 Score: 103.605 bits (257), Expect = 1.072e-21
Identity = 50/97 (51.55%), Postives = 63/97 (64.95%), Query Frame = 1
Query:   79 PTDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMN 369
            P D+TK WP    P   +G + LN+N +N+F E E  AF+P  +VPGI +S DKMLQ RIF+Y D  RHRLG +Y  +PVN PKC   + H DG MN
Sbjct:  275 PFDLTKVWPHADYPPIDIGVMELNRNPENYFTEVENAAFSPSNIVPGIGFSPDKMLQARIFSYADAHRHRLGTHYESIPVNQPKCLVHHYHRDGQMN 371          
BLAST of FC868664 vs. ExPASy Swiss-Prot
Match: CATA_EMENI (Catalase A OS=Emericella nidulans GN=catA PE=2 SV=2)

HSP 1 Score: 100.908 bits (250), Expect = 1.722e-21
Identity = 48/92 (52.17%), Postives = 63/92 (68.48%), Query Frame = 1
Query:   85 DVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDG 360
            D TK WPE+ +PL+ VG L LN+NID FF E E +AF    +VPGI +S+D +LQ R F+Y DTQ  RLG N+  +P+N P CP  N++ DG
Sbjct:  320 DATKVWPEEQVPLRVVGELELNRNIDEFFPETEQVAFCTSHIVPGIDFSDDPLLQGRNFSYQDTQISRLGVNWEEIPINRPVCPFLNHNRDG 411          

HSP 2 Score: 22.7126 bits (47), Expect = 1.722e-21
Identity = 8/22 (36.36%), Postives = 13/22 (59.09%), Query Frame = 2
Query:   14 HPEWKLYIQTIDPDHEDQFVSD 79
            +P+W   IQ I  + +D+F  D
Sbjct:  296 YPKWDFAIQAIPEEDQDKFEFD 317          
BLAST of FC868664 vs. ExPASy Swiss-Prot
Match: CATB_DICDI (Catalase-B OS=Dictyostelium discoideum GN=catB PE=1 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.829e-21
Identity = 51/93 (54.84%), Postives = 66/93 (70.97%), Query Frame = 1
Query:   85 DVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRL-GPNYLMLPVNAPKCPHRNNHYDG 360
            D TK  PE++ P+ P+GR+V+++N DNFFAE E +AF    VVPGI +SND +LQ RIF+Y DTQ  RL GPN+  +P+N P CP  NN  DG
Sbjct:  296 DPTKLIPEELTPVIPLGRMVIDRNPDNFFAETEQVAFCVSHVVPGIDFSNDPLLQGRIFSYLDTQLSRLGGPNFNEIPINRPVCPFANNQRDG 388          
The following BLAST results are available for this feature:
BLAST of FC868664 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141
Match NameE-valueIdentityDescription
CATE_RHIME1.615e-2253.68Catalase C OS=Rhizobium meliloti GN=katE PE=2 SV=2[more]
CATE_MYCAV2.101e-2250.46Catalase HPII OS=Mycobacterium avium GN=katE PE=3 ... [more]
CATA_PIG2.822e-2250.91Catalase OS=Sus scrofa GN=CAT PE=1 SV=4[more]
CATA_DANRE2.822e-2253.04Catalase OS=Danio rerio GN=cat PE=2 SV=1[more]
CATB_PSEAE3.577e-2249.00Catalase OS=Pseudomonas aeruginosa GN=katB PE=3 SV... [more]
CATA_ASPFU4.622e-2246.79Catalase A OS=Aspergillus fumigatus GN=catA PE=3 S... [more]
CATA_RHIME4.814e-2251.55Catalase A OS=Rhizobium meliloti GN=katA PE=3 SV=2[more]
CATA_BRUSU1.072e-2151.55Catalase OS=Brucella suis GN=katA PE=3 SV=3[more]
CATA_EMENI1.722e-2152.17Catalase A OS=Emericella nidulans GN=catA PE=2 SV=... [more]
CATB_DICDI1.829e-2154.84Catalase-B OS=Dictyostelium discoideum GN=catB PE=... [more]

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Properties
Property NameValue
Genbank descriptionC31003C03EF AbioticL1 Citrus clementina cDNA clone C31003C03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868664 ID=FC868664; Name=FC868664; organism=Citrus clementina; type=EST; length=702bp
TTGCAGCTGGAAACATCCTGAGTGGAAACTCTACATTCAGACTATTGATC
CCGATCACGAGGACCAATTTGTCTCTGACCCACTGACGTAACCAAGTGGT
GGCCTGAGGACATCATCCCTCTGCAGCCAGTTGGACGCTTGGTCTTGAAC
AAGAACATCGATAATTTCTTTGCGGAAAATGAAATGCTTGCATTTAACCC
TGGTATCGTGGTTCCTGGGATCTACTACTCAAATGATAAGATGCTCCAAT
GTCGAATCTTTGCCTATGGTGATACCCAGAGGCATCGCCTTGGACCCAAC
TACTTGATGCTTCCAGTTAATGCACCCAAATGTCCTCATCGCAACAATCA
TTATGATGGTTTCATGAATTTCATGCACAGGGATGAGGAGGTACTTAGTT
TCTACTTTCCCCCCTGGAAACAAAATTTATGAATCAAAATAGGCTCGGCA
CCTATAATCTATCCACATTTATCTTAACTTAGATAATGGTGCATGTCTTA
AAGATACAAGTGCTTAGTACAAGTGGATGGTATCAGAATCTAACCTGTTG
TGTGCTAGTGTTATAAAAAAATGCTCTAATTGGATATTATGATGCTTTGT
TTTAGGTCGATTACTTTCCTTCGAGGTATGATCCTACTCGTCATGCTGAG
AGATATCCCATTCCTTCTGATGTAATTACAGGAAGGCGTGAGAAGGCTTG
CA
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