FC868664

Overview
NameFC868664
Unique NameFC868664
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length702
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868664 vs. ExPASy Swiss-Prot
Match: CATA_DICDI (Catalase-A OS=Dictyostelium discoideum GN=catA PE=2 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 1.829e-21
Identity = 54/99 (54.55%), Postives = 65/99 (65.66%), Query Frame = 1
Query:   79 PTDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAP---KCPHRNNHYDGFM 366
            P DVTK W     PL  +GR+VLN+N +N+FAE E  AF+P  +VPGI  S DKMLQ R+F+Y DT RHRLG NY  +PVN P   K   +N   DGFM
Sbjct:  276 PFDVTKIWSHKDYPLIQIGRMVLNRNPENYFAEVEQAAFSPSHMVPGIEPSPDKMLQGRLFSYPDTHRHRLGVNYQQIPVNCPFAVKGGVKNYQRDGFM 374          
BLAST of FC868664 vs. ExPASy Swiss-Prot
Match: CATA_STAXY (Catalase A OS=Staphylococcus xylosus GN=katA PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 3.820e-21
Identity = 52/118 (44.07%), Postives = 71/118 (60.17%), Query Frame = 1
Query:   79 PTDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPK-------CPHRNNHYDGFMNFMHRDEEVLSFYFP 411
            P D+TK W +D  PL  VG   LN+N +N+F + E  AF P  +VPG+ +S DKMLQ R+F+YGDTQR+RLG N+  +PVN PK       CP      DG M  +  ++   + Y+P
Sbjct:  274 PFDLTKVWYKDEYPLIEVGEFELNRNPENYFQDVEQAAFAPTNIVPGLDFSPDKMLQGRLFSYGDTQRYRLGVNHWQIPVNQPKGVGMENICPFSR---DGHMRILDNNQGASTHYYP 388          

HSP 2 Score: 21.9422 bits (45), Expect = 3.820e-21
Identity = 7/22 (31.82%), Postives = 12/22 (54.55%), Query Frame = 2
Query:   17 PEWKLYIQTIDPDHEDQFVSDP 82
            P+WK+YIQ +  +       +P
Sbjct:  253 PKWKMYIQVMTEEQARNHKDNP 274          
BLAST of FC868664 vs. ExPASy Swiss-Prot
Match: CATA_NEIGO (Catalase OS=Neisseria gonorrhoeae GN=katA PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.075e-21
Identity = 49/94 (52.13%), Postives = 61/94 (64.89%), Query Frame = 1
Query:   79 PTDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDG 360
            P D+TK WP+   PL  V    LN+N +NFFA+ E  AF P  +VPGI  S DKMLQ R+F Y D QR+RLG N+  +PVN P+CP  +N  DG
Sbjct:  277 PFDLTKVWPKKDYPLIEVAEFELNRNPENFFADVEQSAFAPSNLVPGIGASPDKMLQARLFNYADAQRYRLGVNFRQIPVNRPRCPVHSNQRDG 370          
BLAST of FC868664 vs. ExPASy Swiss-Prot
Match: CATA_HAEIN (Catalase OS=Haemophilus influenzae GN=katA PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 5.322e-21
Identity = 49/94 (52.13%), Postives = 61/94 (64.89%), Query Frame = 1
Query:   79 PTDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDG 360
            P D+TK W +   PL  VG   LN+N +NFFA+ E  AF P  +VPGI  S D+MLQ R+F Y D QR+RLG NY  +PVN P+CP  +N  DG
Sbjct:  284 PFDLTKVWSKKDYPLIEVGEFELNRNPENFFADVEQSAFAPSNLVPGIGASPDRMLQARLFNYADAQRYRLGVNYRQIPVNRPRCPVHSNQRDG 377          
BLAST of FC868664 vs. ExPASy Swiss-Prot
Match: CATA_BACSU (Vegetative catalase OS=Bacillus subtilis GN=katA PE=1 SV=5)

HSP 1 Score: 97.8265 bits (242), Expect = 6.466e-21
Identity = 53/112 (47.32%), Postives = 68/112 (60.71%), Query Frame = 1
Query:   79 PTDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVLSFYFPP 414
            P DVTK W +   PL  VGR+VL++N +N+FAE E   F+PG +VPGI  S DKMLQ R+FAY D  R+R+G N+  LP+N  +    N   DG M F   D    S Y+ P
Sbjct:  275 PFDVTKVWSQKDYPLIEVGRMVLDRNPENYFAEVEQATFSPGTLVPGIDVSPDKMLQGRLFAYHDAHRYRVGANHQALPINRARNKVNNYQRDGQMRF--DDNGGGSVYYEP 384          

HSP 2 Score: 23.8682 bits (50), Expect = 6.466e-21
Identity = 8/23 (34.78%), Postives = 14/23 (60.87%), Query Frame = 2
Query:   14 HPEWKLYIQTIDPDHEDQFVSDP 82
            +P WKLY+Q +  +  + +  DP
Sbjct:  253 YPAWKLYVQIMPLEDANTYRFDP 275          
BLAST of FC868664 vs. ExPASy Swiss-Prot
Match: CATA_PSEPU (Catalase OS=Pseudomonas putida GN=katA PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.186e-20
Identity = 50/96 (52.08%), Postives = 62/96 (64.58%), Query Frame = 1
Query:   79 PTDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFM 366
            P DVTK W +   PL  VG L LN+N  N+FAE E  AF P  +VPG+  S D+MLQ R+FAY D  R+R+G N+  LPVNAP+CP  +   DG M
Sbjct:  274 PFDVTKTWSQKDYPLIEVGVLELNRNPLNYFAEVEQAAFGPSNMVPGVGLSPDRMLQGRVFAYADAHRYRVGTNHQQLPVNAPRCPVNSYQRDGSM 369          
BLAST of FC868664 vs. ExPASy Swiss-Prot
Match: CATB_AJECA (Catalase B OS=Ajellomyces capsulata GN=CATB PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 1.836e-20
Identity = 45/93 (48.39%), Postives = 66/93 (70.97%), Query Frame = 1
Query:   85 DVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRL-GPNYLMLPVNAPKCPHRNNHYDG 360
            D TK  PE+++P  P+G++VLN+N  N+FAE E + F PG VV GI +++D +LQ R+++Y DTQ +R  GPN+  LP+N P+ P  NN+ DG
Sbjct:  334 DPTKIIPEELVPFTPIGKMVLNRNPKNYFAETEQIMFQPGHVVRGIDFTDDPLLQGRLYSYLDTQLNRHGGPNFEQLPINRPRIPFHNNNRDG 426          

HSP 2 Score: 22.3274 bits (46), Expect = 1.836e-20
Identity = 9/27 (33.33%), Postives = 16/27 (59.26%), Query Frame = 2
Query:    5 SWKHPEWKLYIQTIDPDHEDQFVSDPL 85
            S ++PEW+L  Q ++   + +F  D L
Sbjct:  307 SGRYPEWELGFQLVNEADQSKFDFDLL 333          
BLAST of FC868664 vs. ExPASy Swiss-Prot
Match: CATA_STAES (Catalase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=katA PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.849e-20
Identity = 52/118 (44.07%), Postives = 69/118 (58.47%), Query Frame = 1
Query:   79 PTDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPK-------CPHRNNHYDGFMNFMHRDEEVLSFYFP 411
            P D+TK W +   PL  VG   LN+N +N+F + E  AF P  +VPG+ YS DKMLQ R+F+YGD QR+RLG N+  +PVN PK       CP      DG M F+  ++     Y+P
Sbjct:  277 PFDLTKVWYKKDYPLIEVGEFELNRNPENYFLDVEQAAFTPTNIVPGLDYSPDKMLQGRLFSYGDAQRYRLGVNHWQIPVNQPKGVGVENLCPFSR---DGQMRFLDNNQGGGPHYYP 391          

HSP 2 Score: 23.0978 bits (48), Expect = 1.849e-20
Identity = 7/23 (30.43%), Postives = 13/23 (56.52%), Query Frame = 2
Query:   14 HPEWKLYIQTIDPDHEDQFVSDP 82
            +P+WK+YIQ +  +       +P
Sbjct:  255 YPKWKMYIQVMTEEQAKNHPDNP 277          
BLAST of FC868664 vs. ExPASy Swiss-Prot
Match: CATA_STAEQ (Catalase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=katA PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.849e-20
Identity = 52/118 (44.07%), Postives = 69/118 (58.47%), Query Frame = 1
Query:   79 PTDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPK-------CPHRNNHYDGFMNFMHRDEEVLSFYFP 411
            P D+TK W +   PL  VG   LN+N +N+F + E  AF P  +VPG+ YS DKMLQ R+F+YGD QR+RLG N+  +PVN PK       CP      DG M F+  ++     Y+P
Sbjct:  277 PFDLTKVWYKKDYPLIEVGEFELNRNPENYFLDVEQAAFTPTNIVPGLDYSPDKMLQGRLFSYGDAQRYRLGVNHWQIPVNQPKGVGVENLCPFSR---DGQMRFLDNNQGGGPHYYP 391          

HSP 2 Score: 23.0978 bits (48), Expect = 1.849e-20
Identity = 7/23 (30.43%), Postives = 13/23 (56.52%), Query Frame = 2
Query:   14 HPEWKLYIQTIDPDHEDQFVSDP 82
            +P+WK+YIQ +  +       +P
Sbjct:  255 YPKWKMYIQVMTEEQAKNHPDNP 277          
BLAST of FC868664 vs. ExPASy Swiss-Prot
Match: CATA_ONCVE (Catalase OS=Onchocerca volvulus endobacterium GN=cat PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.022e-20
Identity = 50/98 (51.02%), Postives = 62/98 (63.27%), Query Frame = 1
Query:   79 PTDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNF 372
            P DVTK W +   PL  VG L LN+N  N+FAE E  AF P  +VPG+  S D+MLQ R+FAY D  R+R+G N+  LPVNAP+ P  +   DG M F
Sbjct:  276 PFDVTKTWSQKEFPLIEVGELELNRNPLNYFAEVEQAAFGPSNMVPGVGLSPDRMLQGRVFAYADAHRYRVGTNHQQLPVNAPRSPVNSYQRDGSMAF 373          
The following BLAST results are available for this feature:
BLAST of FC868664 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141
Match NameE-valueIdentityDescription
CATA_DICDI1.829e-2154.55Catalase-A OS=Dictyostelium discoideum GN=catA PE=... [more]
CATA_STAXY3.820e-2144.07Catalase A OS=Staphylococcus xylosus GN=katA PE=3 ... [more]
CATA_NEIGO4.075e-2152.13Catalase OS=Neisseria gonorrhoeae GN=katA PE=3 SV=... [more]
CATA_HAEIN5.322e-2152.13Catalase OS=Haemophilus influenzae GN=katA PE=2 SV... [more]
CATA_BACSU6.466e-2147.32Vegetative catalase OS=Bacillus subtilis GN=katA P... [more]
CATA_PSEPU1.186e-2052.08Catalase OS=Pseudomonas putida GN=katA PE=3 SV=1[more]
CATB_AJECA1.836e-2048.39Catalase B OS=Ajellomyces capsulata GN=CATB PE=2 S... [more]
CATA_STAES1.849e-2044.07Catalase OS=Staphylococcus epidermidis (strain ATC... [more]
CATA_STAEQ1.849e-2044.07Catalase OS=Staphylococcus epidermidis (strain ATC... [more]
CATA_ONCVE2.022e-2051.02Catalase OS=Onchocerca volvulus endobacterium GN=c... [more]

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Properties
Property NameValue
Genbank descriptionC31003C03EF AbioticL1 Citrus clementina cDNA clone C31003C03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868664 ID=FC868664; Name=FC868664; organism=Citrus clementina; type=EST; length=702bp
TTGCAGCTGGAAACATCCTGAGTGGAAACTCTACATTCAGACTATTGATC
CCGATCACGAGGACCAATTTGTCTCTGACCCACTGACGTAACCAAGTGGT
GGCCTGAGGACATCATCCCTCTGCAGCCAGTTGGACGCTTGGTCTTGAAC
AAGAACATCGATAATTTCTTTGCGGAAAATGAAATGCTTGCATTTAACCC
TGGTATCGTGGTTCCTGGGATCTACTACTCAAATGATAAGATGCTCCAAT
GTCGAATCTTTGCCTATGGTGATACCCAGAGGCATCGCCTTGGACCCAAC
TACTTGATGCTTCCAGTTAATGCACCCAAATGTCCTCATCGCAACAATCA
TTATGATGGTTTCATGAATTTCATGCACAGGGATGAGGAGGTACTTAGTT
TCTACTTTCCCCCCTGGAAACAAAATTTATGAATCAAAATAGGCTCGGCA
CCTATAATCTATCCACATTTATCTTAACTTAGATAATGGTGCATGTCTTA
AAGATACAAGTGCTTAGTACAAGTGGATGGTATCAGAATCTAACCTGTTG
TGTGCTAGTGTTATAAAAAAATGCTCTAATTGGATATTATGATGCTTTGT
TTTAGGTCGATTACTTTCCTTCGAGGTATGATCCTACTCGTCATGCTGAG
AGATATCCCATTCCTTCTGATGTAATTACAGGAAGGCGTGAGAAGGCTTG
CA
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