FC868670
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC868670 vs. ExPASy Swiss-Prot
Match: RPE_HAEIN (Ribulose-phosphate 3-epimerase OS=Haemophilus influenzae GN=rpe PE=3 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 1.565e-38 Identity = 82/156 (52.56%), Postives = 111/156 (71.15%), Query Frame = 3 Query: 222 IVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPV-TDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFGGQSFIESQVKKI 686 +++PSILSA+ A+LG+ V+ V AG D IH DVMD +VPN+T GP V ALR P+DVHLM+ ++ +PDF KAGA+ ++ H E S H+ R+L I+D G K+G+V NPA LS ++ VLD VD+VL+MSVNPGFGGQSFI + +KK+ Sbjct: 5 LIAPSILSADLARLGDDVQNVLNAGADVIHFDVMDNHYVPNLTFGPAVCQALRDYGITAPIDVHLMVKPVDRIIPDFAKAGANYITFHPESSE--HIDRSLQLIRDCGCKSGLVFNPAMPLSYLDYVLDKVDVVLLMSVNPGFGGQSFIPATLKKL 158
BLAST of FC868670 vs. ExPASy Swiss-Prot
Match: RPE_SHIFL (Ribulose-phosphate 3-epimerase OS=Shigella flexneri GN=rpe PE=3 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 2.044e-38 Identity = 81/156 (51.92%), Postives = 110/156 (70.51%), Query Frame = 3 Query: 222 IVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPV-TDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFGGQSFIESQVKKI 686 +++PSILSA+FA+LGE AG D +H DVMD +VPN+TIGP+V+ +LR P+DVHLM+ ++ VPDF AGA I++ H E S H+ RTL IK+ G KAG+V NPAT LS ++ V+D +D++L+MSVNPGFGGQSFI + K+ Sbjct: 5 LIAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVPNLTIGPMVLKSLRNYGITAPIDVHLMVKPVDRIVPDFAAAGASIITFHPEASE--HVDRTLQLIKENGCKAGLVFNPATPLSYLDYVMDKLDVILLMSVNPGFGGQSFIPQTLDKL 158
BLAST of FC868670 vs. ExPASy Swiss-Prot
Match: RPE_RHOCA (Ribulose-phosphate 3-epimerase OS=Rhodobacter capsulatus GN=cbbE PE=3 SV=2) HSP 1 Score: 159.073 bits (401), Expect = 2.044e-38 Identity = 76/154 (49.35%), Postives = 103/154 (66.88%), Query Frame = 3 Query: 219 IIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFGGQSFIESQVK 680 I ++PSILSA+FA G +++A+E G DW+HVDVMDG FVPN+T GP V A R +DVHLMI + + + +AGAD+++ H E H+HRTL I+ G K+GV +NP T AIE VLD+ D+V +M+VNPGFGGQ +I+ K Sbjct: 7 IKIAPSILSADFADFGREIQAIEAQGADWVHVDVMDGHFVPNLTFGPPAVAAFRKHVKTVMDVHLMISPVDAYIDAYAQAGADVLTAHVEAGP--HIHRTLQAIRAAGMKSGVAINPGTPAEAIEHVLDIADVVCVMTVNPGFGGQKYIDMTAK 158
BLAST of FC868670 vs. ExPASy Swiss-Prot
Match: RPE_ECOLI (Ribulose-phosphate 3-epimerase OS=Escherichia coli (strain K12) GN=rpe PE=1 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 2.044e-38 Identity = 81/156 (51.92%), Postives = 110/156 (70.51%), Query Frame = 3 Query: 222 IVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPV-TDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFGGQSFIESQVKKI 686 +++PSILSA+FA+LGE AG D +H DVMD +VPN+TIGP+V+ +LR P+DVHLM+ ++ VPDF AGA I++ H E S H+ RTL IK+ G KAG+V NPAT LS ++ V+D +D++L+MSVNPGFGGQSFI + K+ Sbjct: 5 LIAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVPNLTIGPMVLKSLRNYGITAPIDVHLMVKPVDRIVPDFAAAGASIITFHPEASE--HVDRTLQLIKENGCKAGLVFNPATPLSYLDYVMDKLDVILLMSVNPGFGGQSFIPQTLDKL 158
BLAST of FC868670 vs. ExPASy Swiss-Prot
Match: RPE_ECOL6 (Ribulose-phosphate 3-epimerase OS=Escherichia coli O6 GN=rpe PE=3 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 2.044e-38 Identity = 81/156 (51.92%), Postives = 110/156 (70.51%), Query Frame = 3 Query: 222 IVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPV-TDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFGGQSFIESQVKKI 686 +++PSILSA+FA+LGE AG D +H DVMD +VPN+TIGP+V+ +LR P+DVHLM+ ++ VPDF AGA I++ H E S H+ RTL IK+ G KAG+V NPAT LS ++ V+D +D++L+MSVNPGFGGQSFI + K+ Sbjct: 5 LIAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVPNLTIGPMVLKSLRNYGITAPIDVHLMVKPVDRIVPDFAAAGASIITFHPEASE--HVDRTLQLIKENGCKAGLVFNPATPLSYLDYVMDKLDVILLMSVNPGFGGQSFIPQTLDKL 158
BLAST of FC868670 vs. ExPASy Swiss-Prot
Match: RPE_ECO57 (Ribulose-phosphate 3-epimerase OS=Escherichia coli O157:H7 GN=rpe PE=3 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 2.044e-38 Identity = 81/156 (51.92%), Postives = 110/156 (70.51%), Query Frame = 3 Query: 222 IVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPV-TDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFGGQSFIESQVKKI 686 +++PSILSA+FA+LGE AG D +H DVMD +VPN+TIGP+V+ +LR P+DVHLM+ ++ VPDF AGA I++ H E S H+ RTL IK+ G KAG+V NPAT LS ++ V+D +D++L+MSVNPGFGGQSFI + K+ Sbjct: 5 LIAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVPNLTIGPMVLKSLRNYGITAPIDVHLMVKPVDRIVPDFAAAGASIITFHPEASE--HVDRTLQLIKENGCKAGLVFNPATPLSYLDYVMDKLDVILLMSVNPGFGGQSFIPQTLDKL 158
BLAST of FC868670 vs. ExPASy Swiss-Prot
Match: RPE_BUCAI (Ribulose-phosphate 3-epimerase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=rpe PE=3 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 3.487e-38 Identity = 77/155 (49.68%), Postives = 112/155 (72.26%), Query Frame = 3 Query: 225 VSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVT-DLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFGGQSFIESQVKKI 686 ++PSILSA+FA+LGE +K V AG D IH DVMD +VPN+++GP+++++LR P+DVHLM+ + +P F KAGA ++ H E +T+H+ RTLN IK+ G KAG+ NPAT L+ ++ +L+ +DL+L+MSVNPGFG QSF+ S K+ Sbjct: 6 LAPSILSADFARLGEDIKKVIDAGSDLIHFDVMDNHYVPNLSMGPMILESLRNYNITAPIDVHLMVKPVDNLIPQFAKAGATFITFHPE--ATLHIERTLNLIKENGCKAGLAFNPATPLNFLDYILEKLDLILLMSVNPGFGNQSFLPSTFNKL 158
BLAST of FC868670 vs. ExPASy Swiss-Prot
Match: RPE_RHORU (Ribulose-phosphate 3-epimerase OS=Rhodospirillum rubrum GN=cbbE PE=3 SV=2) HSP 1 Score: 154.066 bits (388), Expect = 6.576e-37 Identity = 80/156 (51.28%), Postives = 108/156 (69.23%), Query Frame = 3 Query: 219 IIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFGGQSFIESQVKKI 686 I ++PS+LSA+FA + + G D +H DVMD +VPN+T+GPLV ALRP T LP+DVHLM + + F +AGAD+++ H E S H+HR++ I+ G KAGV LNPA+ LS ++ +L+ +DLVLIMSVNPGFGGQSFI S + KI Sbjct: 5 IRIAPSLLSADFAISRPRCPSDGRTGADILHFDVMDNHYVPNLTVGPLVCAALRPHTSLPIDVHLMTRPVDPLIDSFAEAGADMITFHPEASD--HVHRSVQMIRKRGLKAGVALNPASPLSLLDHILEDLDLVLIMSVNPGFGGQSFIPSALPKI 158
BLAST of FC868670 vs. ExPASy Swiss-Prot
Match: RPE_TREPA (Ribulose-phosphate 3-epimerase OS=Treponema pallidum GN=rpe PE=1 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 3.055e-34 Identity = 70/154 (45.45%), Postives = 101/154 (65.58%), Query Frame = 3 Query: 225 VSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFGGQSFIESQVKKI 686 ++PS+LSA+F+ L + +E G W+H+DVMDG FVPN+T G V+ LR T LP DVHLM+ P + DF++AGAD ++ H E + +H HR ++ I+ G K G+ L P+T ++A+ VL VDLVL+M+VNPGF GQ I + K+ Sbjct: 7 LAPSLLSADFSALDRALVYLEAHGAQWVHLDVMDGHFVPNLTFGAPVLRCLRSKTHLPFDVHLMVSRPADLIEDFVQAGADFLTFHIE--AEVHAHRLIHAIRGRGVKVGISLVPSTPVAALSEVLPFVDLVLVMTVNPGFSGQQMIAHCLSKV 158
BLAST of FC868670 vs. ExPASy Swiss-Prot
Match: RPE_STRCO (Ribulose-phosphate 3-epimerase OS=Streptomyces coelicolor GN=rpe PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 5.210e-34 Identity = 73/154 (47.40%), Postives = 106/154 (68.83%), Query Frame = 3 Query: 225 VSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFGGQSFIESQVKKI 686 ++PSILSA+FA+L ++ KAVE G DW+HVDVMD FVPN+T+G VV++L TD PLD HLMI P++ P +++AGA V+ H E ++ R +I+ GA+A + L PAT + E +L +D++LIM+V PGFGGQ+F++ + KI Sbjct: 5 INPSILSADFARLADEAKAVE--GADWLHVDVMDNHFVPNLTLGVPVVESLARATDTPLDCHLMIEAPDRWAPQYVEAGAGSVTFHAEAAAA--PVRLAREIRAKGARASMALKPATPVEPYEDLLPELDMLLIMTVEPGFGGQAFLDIMLPKI 154 The following BLAST results are available for this feature:
BLAST of FC868670 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 46
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868670 ID=FC868670; Name=FC868670; organism=Citrus clementina; type=EST; length=687bpback to top |