FC868672
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Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868672 vs. ExPASy Swiss-Prot
Match: ARF5_MOUSE (ADP-ribosylation factor 5 OS=Mus musculus GN=Arf5 PE=2 SV=2) HSP 1 Score: 165.236 bits (417), Expect = 3.051e-40 Identity = 77/98 (78.57%), Postives = 86/98 (87.76%), Query Frame = 3
Query: 417 IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLD 710
IRPLWRHYFQNTQGLIFVVDSNDR+RV E+ DEL +ML EDELRDAVLLVFANKQD+PNAM +E+TDKLGL LR R WY+Q+TCAT G GLY+GLD
Sbjct: 74 IRPLWRHYFQNTQGLIFVVDSNDRERVQESADELQKMLQEDELRDAVLLVFANKQDMPNAMPVSELTDKLGLQHLRSRTWYVQATCATQGTGLYDGLD 171 HSP 2 Score: 126.331 bits (316), Expect = 1.570e-28 Identity = 60/67 (89.55%), Postives = 65/67 (97.01%), Query Frame = 2
Query: 8 LFSKLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDRV 208
LFS++F KK+MRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNI FTVWDVGGQD++
Sbjct: 8 LFSRIFGKKQMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNICFTVWDVGGQDKI 74
BLAST of FC868672 vs. ExPASy Swiss-Prot
Match: ARF5_HUMAN (ADP-ribosylation factor 5 OS=Homo sapiens GN=ARF5 PE=1 SV=2) HSP 1 Score: 165.236 bits (417), Expect = 3.051e-40 Identity = 77/98 (78.57%), Postives = 86/98 (87.76%), Query Frame = 3
Query: 417 IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLD 710
IRPLWRHYFQNTQGLIFVVDSNDR+RV E+ DEL +ML EDELRDAVLLVFANKQD+PNAM +E+TDKLGL LR R WY+Q+TCAT G GLY+GLD
Sbjct: 74 IRPLWRHYFQNTQGLIFVVDSNDRERVQESADELQKMLQEDELRDAVLLVFANKQDMPNAMPVSELTDKLGLQHLRSRTWYVQATCATQGTGLYDGLD 171 HSP 2 Score: 126.331 bits (316), Expect = 1.570e-28 Identity = 60/67 (89.55%), Postives = 65/67 (97.01%), Query Frame = 2
Query: 8 LFSKLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDRV 208
LFS++F KK+MRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNI FTVWDVGGQD++
Sbjct: 8 LFSRIFGKKQMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNICFTVWDVGGQDKI 74
BLAST of FC868672 vs. ExPASy Swiss-Prot
Match: ARF1_PLAFA (ADP-ribosylation factor 1 OS=Plasmodium falciparum GN=ARF1 PE=2 SV=3) HSP 1 Score: 165.236 bits (417), Expect = 3.051e-40 Identity = 72/98 (73.47%), Postives = 92/98 (93.88%), Query Frame = 3
Query: 417 IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLD 710
IRPLWRHY+ NT GLIFVVDSNDR+R+ +AR+ELHRM+NE+EL+DA++LVFANKQDLPNAM+AAE+T+KL L+++R+R+W+IQSTCAT G+GLYEG D
Sbjct: 74 IRPLWRHYYSNTDGLIFVVDSNDRERIDDAREELHRMINEEELKDAIILVFANKQDLPNAMSAAEVTEKLHLNTIRERNWFIQSTCATRGDGLYEGFD 171 HSP 2 Score: 122.865 bits (307), Expect = 1.736e-27 Identity = 56/69 (81.16%), Postives = 68/69 (98.55%), Query Frame = 2
Query: 2 TKLFSKLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDRV 208
++LF++LF KK++RILMVGLDAAGKTTILYK+KLGE+VTTIPTIGFNVETVE++NISFTVWDVGGQD++
Sbjct: 6 SRLFNRLFQKKDVRILMVGLDAAGKTTILYKVKLGEVVTTIPTIGFNVETVEFRNISFTVWDVGGQDKI 74
BLAST of FC868672 vs. ExPASy Swiss-Prot
Match: ARF4_BOVIN (ADP-ribosylation factor 4 OS=Bos taurus GN=ARF4 PE=2 SV=3) HSP 1 Score: 164.851 bits (416), Expect = 3.984e-40 Identity = 77/98 (78.57%), Postives = 86/98 (87.76%), Query Frame = 3
Query: 417 IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLD 710
IRPLWRHYFQNTQGLIFVVDSNDR+R+ E +EL +ML EDELRDAVLL+FANKQDLPNAM +E+TDKLGL SLR R WY+Q+TCAT G GLYEGLD
Sbjct: 74 IRPLWRHYFQNTQGLIFVVDSNDRERIQEGAEELQKMLQEDELRDAVLLLFANKQDLPNAMAISEMTDKLGLQSLRNRTWYVQATCATQGTGLYEGLD 171 HSP 2 Score: 127.487 bits (319), Expect = 7.050e-29 Identity = 61/69 (88.41%), Postives = 66/69 (95.65%), Query Frame = 2
Query: 2 TKLFSKLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDRV 208
+ LFS+LF KK+MRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNI FTVWDVGGQD++
Sbjct: 6 SSLFSRLFGKKQMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNICFTVWDVGGQDKI 74
BLAST of FC868672 vs. ExPASy Swiss-Prot
Match: ARF5_CHICK (ADP-ribosylation factor 5 OS=Gallus gallus GN=ARF5 PE=2 SV=2) HSP 1 Score: 164.081 bits (414), Expect = 6.796e-40 Identity = 76/98 (77.55%), Postives = 87/98 (88.78%), Query Frame = 3
Query: 417 IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLD 710
IRPLWRHYFQNTQGLIFVVDSNDR+RV E+ +EL +ML EDELRDAVLLVFANKQD+PNAM +E+TDKLGL +LR R WY+Q+TCAT G GLY+GLD
Sbjct: 74 IRPLWRHYFQNTQGLIFVVDSNDRERVQESAEELQKMLQEDELRDAVLLVFANKQDMPNAMVVSELTDKLGLQALRSRTWYVQATCATQGTGLYDGLD 171 HSP 2 Score: 125.561 bits (314), Expect = 2.679e-28 Identity = 59/67 (88.06%), Postives = 65/67 (97.01%), Query Frame = 2
Query: 8 LFSKLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDRV 208
+FS++F KK+MRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNI FTVWDVGGQD++
Sbjct: 8 IFSRIFGKKQMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNICFTVWDVGGQDKI 74
BLAST of FC868672 vs. ExPASy Swiss-Prot
Match: ARF4_XENLA (ADP-ribosylation factor 4 OS=Xenopus laevis GN=arf4 PE=2 SV=2) HSP 1 Score: 163.31 bits (412), Expect = 1.159e-39 Identity = 77/98 (78.57%), Postives = 86/98 (87.76%), Query Frame = 3
Query: 417 IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLD 710
IRPLWRHYFQNTQGLIFVVDSNDR+R+ EA +EL +ML EDELRDAVLLVFANKQDLPNAM +E+TDKL L +LR R WY+Q+TCAT G GLYEGLD
Sbjct: 74 IRPLWRHYFQNTQGLIFVVDSNDRERIQEAAEELQKMLQEDELRDAVLLVFANKQDLPNAMAISEMTDKLTLQTLRNRTWYVQATCATQGTGLYEGLD 171 HSP 2 Score: 127.487 bits (319), Expect = 7.050e-29 Identity = 61/69 (88.41%), Postives = 66/69 (95.65%), Query Frame = 2
Query: 2 TKLFSKLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDRV 208
+ LFS+LF KK+MRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNI FTVWDVGGQD++
Sbjct: 6 SSLFSRLFGKKQMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNICFTVWDVGGQDKI 74
BLAST of FC868672 vs. ExPASy Swiss-Prot
Match: ARF1_PLAFO (ADP-ribosylation factor 1 OS=Plasmodium falciparum (isolate NF54) GN=ARF1 PE=2 SV=2) HSP 1 Score: 162.54 bits (410), Expect = 1.977e-39 Identity = 71/98 (72.45%), Postives = 91/98 (92.86%), Query Frame = 3
Query: 417 IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLD 710
IRPLWRHY+ NT GLIFVVDSNDR+R+ +AR+ LHRM+NE+EL+DA++LVFANKQDLPNAM+AAE+T+KL L+++R+R+W+IQSTCAT G+GLYEG D
Sbjct: 74 IRPLWRHYYSNTDGLIFVVDSNDRERIDDAREGLHRMINEEELKDAIILVFANKQDLPNAMSAAEVTEKLHLNTIRERNWFIQSTCATRGDGLYEGFD 171 HSP 2 Score: 122.865 bits (307), Expect = 1.736e-27 Identity = 56/69 (81.16%), Postives = 68/69 (98.55%), Query Frame = 2
Query: 2 TKLFSKLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDRV 208
++LF++LF KK++RILMVGLDAAGKTTILYK+KLGE+VTTIPTIGFNVETVE++NISFTVWDVGGQD++
Sbjct: 6 SRLFNRLFQKKDVRILMVGLDAAGKTTILYKVKLGEVVTTIPTIGFNVETVEFRNISFTVWDVGGQDKI 74
BLAST of FC868672 vs. ExPASy Swiss-Prot
Match: ARF2_YEAST (ADP-ribosylation factor 2 OS=Saccharomyces cerevisiae GN=ARF2 PE=1 SV=3) HSP 1 Score: 162.155 bits (409), Expect = 2.583e-39 Identity = 75/98 (76.53%), Postives = 89/98 (90.82%), Query Frame = 3
Query: 417 IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLD 710
IR LWRHY++NT+G+IFV+DSNDR R+ EAR+ + RMLNEDELR+AV LVFANKQDLP AM+AAEIT+KLGLHS+R R W+IQSTCATSGEGLYEGL+
Sbjct: 74 IRSLWRHYYRNTEGVIFVIDSNDRSRIGEAREVMQRMLNEDELRNAVWLVFANKQDLPEAMSAAEITEKLGLHSIRNRPWFIQSTCATSGEGLYEGLE 171 HSP 2 Score: 127.872 bits (320), Expect = 5.398e-29 Identity = 59/72 (81.94%), Postives = 67/72 (93.06%), Query Frame = 2
Query: 2 TKLFSKLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDRVSNI 217
+KLFS LF KEMRILMVGLD AGKTT+LYKLKLGE++TTIPTIGFNVETV+YKNISFTVWDVGGQDR+ ++
Sbjct: 6 SKLFSNLFGNKEMRILMVGLDGAGKTTVLYKLKLGEVITTIPTIGFNVETVQYKNISFTVWDVGGQDRIRSL 77
BLAST of FC868672 vs. ExPASy Swiss-Prot
Match: ARF4_PONAB (ADP-ribosylation factor 4 OS=Pongo abelii GN=ARF4 PE=2 SV=3) HSP 1 Score: 161.384 bits (407), Expect = 4.405e-39 Identity = 76/98 (77.55%), Postives = 85/98 (86.73%), Query Frame = 3
Query: 417 IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLD 710
IRPLW+HYFQNTQGLIFVVDSNDR+R+ E DEL +ML DELRDAVLL+FANKQDLPNAM +E+TDKLGL SLR R WY+Q+TCAT G GLYEGLD
Sbjct: 74 IRPLWKHYFQNTQGLIFVVDSNDRERIQEVADELQKMLLVDELRDAVLLLFANKQDLPNAMAISEMTDKLGLQSLRNRTWYVQATCATQGTGLYEGLD 171 HSP 2 Score: 128.642 bits (322), Expect = 3.164e-29 Identity = 62/69 (89.86%), Postives = 66/69 (95.65%), Query Frame = 2
Query: 2 TKLFSKLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDRV 208
+ LFS+LF KK+MRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNI FTVWDVGGQDR+
Sbjct: 6 SSLFSRLFGKKQMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNICFTVWDVGGQDRI 74
BLAST of FC868672 vs. ExPASy Swiss-Prot
Match: ARF4_HUMAN (ADP-ribosylation factor 4 OS=Homo sapiens GN=ARF4 PE=1 SV=3) HSP 1 Score: 161.384 bits (407), Expect = 4.405e-39 Identity = 76/98 (77.55%), Postives = 85/98 (86.73%), Query Frame = 3
Query: 417 IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLD 710
IRPLW+HYFQNTQGLIFVVDSNDR+R+ E DEL +ML DELRDAVLL+FANKQDLPNAM +E+TDKLGL SLR R WY+Q+TCAT G GLYEGLD
Sbjct: 74 IRPLWKHYFQNTQGLIFVVDSNDRERIQEVADELQKMLLVDELRDAVLLLFANKQDLPNAMAISEMTDKLGLQSLRNRTWYVQATCATQGTGLYEGLD 171 HSP 2 Score: 128.642 bits (322), Expect = 3.164e-29 Identity = 62/69 (89.86%), Postives = 66/69 (95.65%), Query Frame = 2
Query: 2 TKLFSKLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDRV 208
+ LFS+LF KK+MRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNI FTVWDVGGQDR+
Sbjct: 6 SSLFSRLFGKKQMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNICFTVWDVGGQDRI 74 The following BLAST results are available for this feature:
BLAST of FC868672 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 137
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868672 ID=FC868672; Name=FC868672; organism=Citrus clementina; type=EST; length=711bpback to top |