FC868672
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868672 vs. ExPASy Swiss-Prot
Match: ARL5A_BOVIN (ADP-ribosylation factor-like protein 5A OS=Bos taurus GN=ARL5A PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 7.066e-21 Identity = 47/98 (47.96%), Postives = 68/98 (69.39%), Query Frame = 3 Query: 417 IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLD 710 +R W Y+ NT+ +I VVDS DR+R+ R+EL++ML ++LR A LL+FANKQD+ M AEI+ L L S++ W+IQ+ CA +GEGL +GL+ Sbjct: 73 LRSSWNTYYTNTEFVIVVVDSTDRERISVTREELYKMLAHEDLRKAGLLIFANKQDVKGCMTVAEISQFLKLTSIKDHQWHIQACCALTGEGLCQGLE 170 HSP 2 Score: 75.0998 bits (183), Expect = 4.152e-13 Identity = 34/70 (48.57%), Postives = 49/70 (70.00%), Query Frame = 2 Query: 17 KLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDRVSNI*NT 226 +LF +E ++++VGLD AGKTTILY+ + E+V T PTIG NVE + N F +WD+GGQ+ + + NT Sbjct: 10 RLFNHQEHKVIIVGLDNAGKTTILYQFSMNEVVHTSPTIGSNVEEIVINNTRFLMWDIGGQESLRSSWNT 79
BLAST of FC868672 vs. ExPASy Swiss-Prot
Match: ARL3_XENLA (ADP-ribosylation factor-like protein 3 OS=Xenopus laevis GN=arl3 PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 7.066e-21 Identity = 48/98 (48.98%), Postives = 68/98 (69.39%), Query Frame = 3 Query: 417 IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLD 710 IRP WR+YF+NT LI+V+DS DR R E EL +L+E++L +L+FANKQDL A A+EI + L LH++R R W IQS A +G+G+ +G++ Sbjct: 74 IRPYWRNYFENTDVLIYVIDSADRKRFEETGQELAELLDEEKLSGVPVLIFANKQDLLTAAPASEIAEGLNLHTIRDRVWQIQSCSALTGQGVQDGMN 171
BLAST of FC868672 vs. ExPASy Swiss-Prot
Match: ARL2_BOVIN (ADP-ribosylation factor-like protein 2 OS=Bos taurus GN=ARL2 PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 7.066e-21 Identity = 48/98 (48.98%), Postives = 66/98 (67.35%), Query Frame = 3 Query: 417 IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLD 710 +R WR+YF++T GLI+VVDS DR R+ + + EL +L E+ L A LL+FANKQDLP A+++ I + L L S+R HW IQ A +GE L G+D Sbjct: 73 LRSYWRNYFESTDGLIWVVDSADRQRMQDCQRELQNLLVEERLAGATLLIFANKQDLPGALSSNAIREALELDSIRSHHWCIQGCSAVTGENLLPGID 170 HSP 2 Score: 69.3218 bits (168), Expect = 2.278e-11 Identity = 30/57 (52.63%), Postives = 43/57 (75.44%), Query Frame = 2 Query: 29 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQ 199 ++E+R+LM+GLD AGKTTIL K +I T PT+GFN++T+E++ +WDVGGQ Sbjct: 14 ERELRLLMLGLDNAGKTTILKKFNGEDIDTISPTLGFNIKTLEHRGFKLNIWDVGGQ 70
BLAST of FC868672 vs. ExPASy Swiss-Prot
Match: ARL3_PIG (ADP-ribosylation factor-like protein 3 OS=Sus scrofa GN=ARL3 PE=2 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 9.228e-21 Identity = 49/98 (50.00%), Postives = 67/98 (68.37%), Query Frame = 3 Query: 417 IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLD 710 IRP WR+YF+NT LI+V+DS DR R E EL +L E++L +L+FANKQDL A A+EI + L LH++R R W IQS A +GEG+ +G++ Sbjct: 74 IRPYWRNYFENTDILIYVIDSADRKRFEETGQELAELLEEEKLSCVPVLIFANKQDLLTAAPASEIAEGLNLHTIRDRVWQIQSCSALTGEGVQDGMN 171
BLAST of FC868672 vs. ExPASy Swiss-Prot
Match: ARL2_HUMAN (ADP-ribosylation factor-like protein 2 OS=Homo sapiens GN=ARL2 PE=1 SV=4) HSP 1 Score: 100.138 bits (248), Expect = 1.205e-20 Identity = 48/98 (48.98%), Postives = 66/98 (67.35%), Query Frame = 3 Query: 417 IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLD 710 +R WR+YF++T GLI+VVDS DR R+ + + EL +L E+ L A LL+FANKQDLP A+++ I + L L S+R HW IQ A +GE L G+D Sbjct: 73 LRSYWRNYFESTDGLIWVVDSADRQRMQDCQRELQSLLVEERLAGATLLIFANKQDLPGALSSNAIREVLELDSIRSHHWCIQGCSAVTGENLLPGID 170 HSP 2 Score: 69.3218 bits (168), Expect = 2.278e-11 Identity = 30/57 (52.63%), Postives = 43/57 (75.44%), Query Frame = 2 Query: 29 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQ 199 ++E+R+LM+GLD AGKTTIL K +I T PT+GFN++T+E++ +WDVGGQ Sbjct: 14 ERELRLLMLGLDNAGKTTILKKFNGEDIDTISPTLGFNIKTLEHRGFKLNIWDVGGQ 70
BLAST of FC868672 vs. ExPASy Swiss-Prot
Match: ARL3_MOUSE (ADP-ribosylation factor-like protein 3 OS=Mus musculus GN=Arl3 PE=1 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.574e-20 Identity = 49/98 (50.00%), Postives = 66/98 (67.35%), Query Frame = 3 Query: 417 IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLD 710 IRP WR YF+NT LI+V+DS DR R E EL +L E++L +L+FANKQDL A A+EI + L LH++R R W IQS A +GEG+ +G++ Sbjct: 74 IRPYWRSYFENTDILIYVIDSADRKRFEETGQELTELLEEEKLSCVPVLIFANKQDLLTAAPASEIAEGLNLHTIRDRVWQIQSCSALTGEGVQDGMN 171
BLAST of FC868672 vs. ExPASy Swiss-Prot
Match: ARL2_RAT (ADP-ribosylation factor-like protein 2 OS=Rattus norvegicus GN=Arl2 PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.574e-20 Identity = 48/98 (48.98%), Postives = 65/98 (66.33%), Query Frame = 3 Query: 417 IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLD 710 +R WR+YF++T GLI+VVDS DR R+ + + EL +L E+ L A LL+FANKQDLP A++ I + L L S+R HW IQ A +GE L G+D Sbjct: 73 LRSYWRNYFESTDGLIWVVDSADRQRMQDCQRELQSLLVEERLAGATLLIFANKQDLPGALSCNAIQEALELDSIRSHHWRIQGCSAVTGEDLLPGID 170 HSP 2 Score: 67.3958 bits (163), Expect = 8.658e-11 Identity = 28/57 (49.12%), Postives = 43/57 (75.44%), Query Frame = 2 Query: 29 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQ 199 ++++R+LM+GLD AGKTTIL K ++ T PT+GFN++T+E++ +WDVGGQ Sbjct: 14 ERDVRLLMLGLDNAGKTTILKKFNGEDVDTISPTLGFNIKTLEHRGFKLNIWDVGGQ 70
BLAST of FC868672 vs. ExPASy Swiss-Prot
Match: ARL2_MOUSE (ADP-ribosylation factor-like protein 2 OS=Mus musculus GN=Arl2 PE=1 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.574e-20 Identity = 48/98 (48.98%), Postives = 65/98 (66.33%), Query Frame = 3 Query: 417 IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLD 710 +R WR+YF++T GLI+VVDS DR R+ + + EL +L E+ L A LL+FANKQDLP A++ I + L L S+R HW IQ A +GE L G+D Sbjct: 73 LRSYWRNYFESTDGLIWVVDSADRQRMQDCQRELQSLLVEERLAGATLLIFANKQDLPGALSCNAIQEALELDSIRSHHWRIQGCSAVTGEDLLPGID 170 HSP 2 Score: 68.9366 bits (167), Expect = 2.976e-11 Identity = 29/57 (50.88%), Postives = 43/57 (75.44%), Query Frame = 2 Query: 29 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQ 199 ++E+R+LM+GLD AGKTTIL K ++ T PT+GFN++T+E++ +WDVGGQ Sbjct: 14 ERELRLLMLGLDNAGKTTILKKFNGEDVDTISPTLGFNIKTLEHRGFKLNIWDVGGQ 70
BLAST of FC868672 vs. ExPASy Swiss-Prot
Match: ARL3_HUMAN (ADP-ribosylation factor-like protein 3 OS=Homo sapiens GN=ARL3 PE=1 SV=2) HSP 1 Score: 99.3673 bits (246), Expect = 2.056e-20 Identity = 48/98 (48.98%), Postives = 67/98 (68.37%), Query Frame = 3 Query: 417 IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLD 710 IRP W++YF+NT LI+V+DS DR R E EL +L E++L +L+FANKQDL A A+EI + L LH++R R W IQS A +GEG+ +G++ Sbjct: 74 IRPYWKNYFENTDILIYVIDSADRKRFEETGQELAELLEEEKLSCVPVLIFANKQDLLTAAPASEIAEGLNLHTIRDRVWQIQSCSALTGEGVQDGMN 171
BLAST of FC868672 vs. ExPASy Swiss-Prot
Match: ARL5_DICDI (ADP-ribosylation factor-like protein 5 OS=Dictyostelium discoideum GN=arl5 PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.812e-20 Identity = 43/98 (43.88%), Postives = 68/98 (69.39%), Query Frame = 3 Query: 417 IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLD 710 +R W Y+ NTQ +I V+DS DR RV ++EL +ML + L+ +++L++ANKQDL +AM+ E++ L LHS++ ++IQ+ CA +G+GL GLD Sbjct: 77 LRSTWNQYYINTQAVILVIDSTDRARVNLIKEELFKMLAHENLKKSIILIYANKQDLKDAMSPTELSTLLSLHSIKDHDYHIQACCALTGQGLESGLD 174 HSP 2 Score: 77.7962 bits (190), Expect = 6.406e-14 Identity = 39/95 (41.05%), Postives = 61/95 (64.21%), Query Frame = 2 Query: 8 LFSKLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDRVSNI*NTKISPPKSFFNFIELSTYYVILI 292 ++++ F E ++++VGL+AAGKTT LYKL L E+V+T PT+G N+E Y+NI +WD+GGQD + +S +N ++T VIL+ Sbjct: 11 IWNRFFNNAEYKVIIVGLNAAGKTTTLYKLLLDEVVSTTPTVGSNLEEFVYRNIRLLMWDLGGQDLL-----------RSTWNQYYINTQAVILV 94 The following BLAST results are available for this feature:
BLAST of FC868672 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 137
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868672 ID=FC868672; Name=FC868672; organism=Citrus clementina; type=EST; length=711bpback to top |