FC868749 | Citrus Genome Database

Overview


Name	FC868749
Unique Name	FC868749
Type	EST
Organism	Citrus clementina (Clementine)
Sequence length	707

Libraries


Library Name	Type
AbioticL1	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of FC868749 vs. ExPASy Swiss-Prot
Match: UBIQ_RABIT (Ubiquitin OS=Oryctolagus cuniculus PE=1 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.900e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 1

Query:   70 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 297
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 145.976 bits (367), Expect = 1.900e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 1

Query:  298 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 525
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 90.5077 bits (223), Expect = 4.460e-19
Identity = 45/48 (93.75%), Postives = 46/48 (95.83%), Query Frame = 1

Query:  526 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQXRLIFAGK 669
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQ RLIFAGK
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGK 48

HSP 4 Score: 23.483 bits (49), Expect = 4.460e-19
Identity = 9/10 (90.00%), Postives = 10/10 (100.00%), Query Frame = 3

Query:  672 LEDGRTLADY 701
            LEDGRTL+DY
Sbjct:   50 LEDGRTLSDY 59

[Close]

BLAST of FC868749 vs. ExPASy Swiss-Prot
Match: UBIQ_PONPY (Ubiquitin OS=Pongo pygmaeus GN=UBA52 PE=3 SV=2)

HSP 1 Score: 145.976 bits (367), Expect = 1.900e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 1

Query:   70 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 297
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 145.976 bits (367), Expect = 1.900e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 1

Query:  298 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 525
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 90.5077 bits (223), Expect = 4.460e-19
Identity = 45/48 (93.75%), Postives = 46/48 (95.83%), Query Frame = 1

Query:  526 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQXRLIFAGK 669
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQ RLIFAGK
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGK 48

HSP 4 Score: 23.483 bits (49), Expect = 4.460e-19
Identity = 9/10 (90.00%), Postives = 10/10 (100.00%), Query Frame = 3

Query:  672 LEDGRTLADY 701
            LEDGRTL+DY
Sbjct:   50 LEDGRTLSDY 59

[Close]

BLAST of FC868749 vs. ExPASy Swiss-Prot
Match: UBIQ_PLUXY (Ubiquitin OS=Plutella xylostella PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.900e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 1

Query:   70 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 297
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 145.976 bits (367), Expect = 1.900e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 1

Query:  298 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 525
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 90.5077 bits (223), Expect = 4.460e-19
Identity = 45/48 (93.75%), Postives = 46/48 (95.83%), Query Frame = 1

Query:  526 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQXRLIFAGK 669
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQ RLIFAGK
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGK 48

HSP 4 Score: 23.483 bits (49), Expect = 4.460e-19
Identity = 9/10 (90.00%), Postives = 10/10 (100.00%), Query Frame = 3

Query:  672 LEDGRTLADY 701
            LEDGRTL+DY
Sbjct:   50 LEDGRTLSDY 59

[Close]

BLAST of FC868749 vs. ExPASy Swiss-Prot
Match: UBIQ_PIG (Ubiquitin OS=Sus scrofa GN=UBA52 PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.900e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 1

Query:   70 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 297
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 145.976 bits (367), Expect = 1.900e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 1

Query:  298 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 525
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 90.5077 bits (223), Expect = 4.460e-19
Identity = 45/48 (93.75%), Postives = 46/48 (95.83%), Query Frame = 1

Query:  526 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQXRLIFAGK 669
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQ RLIFAGK
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGK 48

HSP 4 Score: 23.483 bits (49), Expect = 4.460e-19
Identity = 9/10 (90.00%), Postives = 10/10 (100.00%), Query Frame = 3

Query:  672 LEDGRTLADY 701
            LEDGRTL+DY
Sbjct:   50 LEDGRTLSDY 59

[Close]

BLAST of FC868749 vs. ExPASy Swiss-Prot
Match: UBIQ_PANTR (Ubiquitin OS=Pan troglodytes GN=UBB PE=1 SV=2)

HSP 1 Score: 145.976 bits (367), Expect = 1.900e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 1

Query:   70 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 297
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 145.976 bits (367), Expect = 1.900e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 1

Query:  298 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 525
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 90.5077 bits (223), Expect = 4.460e-19
Identity = 45/48 (93.75%), Postives = 46/48 (95.83%), Query Frame = 1

Query:  526 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQXRLIFAGK 669
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQ RLIFAGK
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGK 48

HSP 4 Score: 23.483 bits (49), Expect = 4.460e-19
Identity = 9/10 (90.00%), Postives = 10/10 (100.00%), Query Frame = 3

Query:  672 LEDGRTLADY 701
            LEDGRTL+DY
Sbjct:   50 LEDGRTLSDY 59

[Close]

BLAST of FC868749 vs. ExPASy Swiss-Prot
Match: UBIQ_OPHHA (Ubiquitin OS=Ophiophagus hannah PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.900e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 1

Query:   70 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 297
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 145.976 bits (367), Expect = 1.900e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 1

Query:  298 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 525
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 90.5077 bits (223), Expect = 4.460e-19
Identity = 45/48 (93.75%), Postives = 46/48 (95.83%), Query Frame = 1

Query:  526 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQXRLIFAGK 669
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQ RLIFAGK
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGK 48

HSP 4 Score: 23.483 bits (49), Expect = 4.460e-19
Identity = 9/10 (90.00%), Postives = 10/10 (100.00%), Query Frame = 3

Query:  672 LEDGRTLADY 701
            LEDGRTL+DY
Sbjct:   50 LEDGRTLSDY 59

[Close]

BLAST of FC868749 vs. ExPASy Swiss-Prot
Match: UBIQ_MOUSE (Ubiquitin OS=Mus musculus GN=Rps27a PE=1 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.900e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 1

Query:   70 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 297
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 145.976 bits (367), Expect = 1.900e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 1

Query:  298 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 525
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 90.5077 bits (223), Expect = 4.460e-19
Identity = 45/48 (93.75%), Postives = 46/48 (95.83%), Query Frame = 1

Query:  526 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQXRLIFAGK 669
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQ RLIFAGK
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGK 48

HSP 4 Score: 23.483 bits (49), Expect = 4.460e-19
Identity = 9/10 (90.00%), Postives = 10/10 (100.00%), Query Frame = 3

Query:  672 LEDGRTLADY 701
            LEDGRTL+DY
Sbjct:   50 LEDGRTLSDY 59

[Close]

BLAST of FC868749 vs. ExPASy Swiss-Prot
Match: UBIQ_MANSE (Ubiquitin OS=Manduca sexta PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.900e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 1

Query:   70 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 297
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 145.976 bits (367), Expect = 1.900e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 1

Query:  298 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 525
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 90.5077 bits (223), Expect = 4.460e-19
Identity = 45/48 (93.75%), Postives = 46/48 (95.83%), Query Frame = 1

Query:  526 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQXRLIFAGK 669
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQ RLIFAGK
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGK 48

HSP 4 Score: 23.483 bits (49), Expect = 4.460e-19
Identity = 9/10 (90.00%), Postives = 10/10 (100.00%), Query Frame = 3

Query:  672 LEDGRTLADY 701
            LEDGRTL+DY
Sbjct:   50 LEDGRTLSDY 59

[Close]

BLAST of FC868749 vs. ExPASy Swiss-Prot
Match: UBIQ_MACFA (Ubiquitin OS=Macaca fascicularis GN=UBA52 PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.900e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 1

Query:   70 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 297
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 145.976 bits (367), Expect = 1.900e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 1

Query:  298 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 525
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 90.5077 bits (223), Expect = 4.460e-19
Identity = 45/48 (93.75%), Postives = 46/48 (95.83%), Query Frame = 1

Query:  526 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQXRLIFAGK 669
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQ RLIFAGK
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGK 48

HSP 4 Score: 23.483 bits (49), Expect = 4.460e-19
Identity = 9/10 (90.00%), Postives = 10/10 (100.00%), Query Frame = 3

Query:  672 LEDGRTLADY 701
            LEDGRTL+DY
Sbjct:   50 LEDGRTLSDY 59

[Close]

BLAST of FC868749 vs. ExPASy Swiss-Prot
Match: UBIQ_ICTPU (Ubiquitin OS=Ictalurus punctatus GN=rps27a PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.900e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 1

Query:   70 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 297
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 145.976 bits (367), Expect = 1.900e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 1

Query:  298 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 525
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 90.5077 bits (223), Expect = 4.460e-19
Identity = 45/48 (93.75%), Postives = 46/48 (95.83%), Query Frame = 1

Query:  526 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQXRLIFAGK 669
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQ RLIFAGK
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGK 48

HSP 4 Score: 23.483 bits (49), Expect = 4.460e-19
Identity = 9/10 (90.00%), Postives = 10/10 (100.00%), Query Frame = 3

Query:  672 LEDGRTLADY 701
            LEDGRTL+DY
Sbjct:   50 LEDGRTLSDY 59

The following BLAST results are available for this feature:

BLAST of FC868749 vs. ExPASy Swiss-Prot

BLAST of FC868749 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 99


Match Name	E-value	Identity	Description
UBIQ_RABIT	1.900e-34	96.05	Ubiquitin OS=Oryctolagus cuniculus PE=1 SV=1	[more]
UBIQ_PONPY	1.900e-34	96.05	Ubiquitin OS=Pongo pygmaeus GN=UBA52 PE=3 SV=2	[more]
UBIQ_PLUXY	1.900e-34	96.05	Ubiquitin OS=Plutella xylostella PE=3 SV=1	[more]
UBIQ_PIG	1.900e-34	96.05	Ubiquitin OS=Sus scrofa GN=UBA52 PE=3 SV=1	[more]
UBIQ_PANTR	1.900e-34	96.05	Ubiquitin OS=Pan troglodytes GN=UBB PE=1 SV=2	[more]
UBIQ_OPHHA	1.900e-34	96.05	Ubiquitin OS=Ophiophagus hannah PE=3 SV=1	[more]
UBIQ_MOUSE	1.900e-34	96.05	Ubiquitin OS=Mus musculus GN=Rps27a PE=1 SV=1	[more]
UBIQ_MANSE	1.900e-34	96.05	Ubiquitin OS=Manduca sexta PE=3 SV=1	[more]
UBIQ_MACFA	1.900e-34	96.05	Ubiquitin OS=Macaca fascicularis GN=UBA52 PE=3 SV=...	[more]
UBIQ_ICTPU	1.900e-34	96.05	Ubiquitin OS=Ictalurus punctatus GN=rps27a PE=3 SV...	[more]

Pages

Properties


Property Name	Value
Genbank description	C31004C11EF AbioticL1 Citrus clementina cDNA clone C31004C11, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>FC868749 ID=FC868749; Name=FC868749; organism=Citrus clementina; type=EST; length=707bp
GAAAAATTCTCAGATTATCTTCTCCTTTAATTCGATAAAAGGCCTCCTTC
TGTTCTCTCTGTCAAGCAGATGCAAATCTTTGTGAAAACTCTCACCGGCA
AGACAATAACCCTTGAGGTTGAAAGCTCCGACACCATTGATAATGTAAAA
GCCAAGATCCAGGACAAGGAAGGGATCCCACCAGATCAGCAGAGGCTTAT
CTTTGCTGGTAAACAGCTCGAGGATGGTCGCACACTCGCTGACTATAATA
TCCAGAAGGAATCAACCCTCCACTTGGTCCTTCGACTTAGGGGTGGTATG
CAGATCTTTGTAAAGACCCTCACTGGCAAGACGATTACTCTTGAGGTGGA
AAGCTCCGACACCATTGACAATGTGAAAGCCAAGATTCAAGACAAGGAAG
GGATCCCACCAGACCAACAGAGGCTTATCTTTGCTGGTAAACAGCTTGAG
GATGGTCGCACACTTGCTGATTATAACATCCAGAAGGAGTCAACCCTCCA
CTTGGTCCTCCGTCTCCGTGGTGGTATGCAGATCTTTGTAAAGACCCTCA
CTGGAAAGACTATCACCCTTGAGGTGGAAAGCTCCGACACCATTGACAAT
GTCAAAGCCAAAATTCAGGATAAGGAAGGGATCCCACCAGACCAGNCAAG
GCTCATCTTTGCCGGTAAACACTAGAGGATGGACGCACACTTGCAGACTA
CACATCC