FC868749

Overview
NameFC868749
Unique NameFC868749
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length707
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10338 contig Ccv1_Contig10338:2..706. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC868749 vs. ExPASy Swiss-Prot
Match: UBIQ_RABIT (Ubiquitin OS=Oryctolagus cuniculus PE=1 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.900e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 1
Query:   70 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 297
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76          

HSP 2 Score: 145.976 bits (367), Expect = 1.900e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 1
Query:  298 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 525
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76          

HSP 3 Score: 90.5077 bits (223), Expect = 4.460e-19
Identity = 45/48 (93.75%), Postives = 46/48 (95.83%), Query Frame = 1
Query:  526 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQXRLIFAGK 669
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQ RLIFAGK
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGK 48          

HSP 4 Score: 23.483 bits (49), Expect = 4.460e-19
Identity = 9/10 (90.00%), Postives = 10/10 (100.00%), Query Frame = 3
Query:  672 LEDGRTLADY 701
            LEDGRTL+DY
Sbjct:   50 LEDGRTLSDY 59          
BLAST of FC868749 vs. ExPASy Swiss-Prot
Match: UBIQ_PONPY (Ubiquitin OS=Pongo pygmaeus GN=UBA52 PE=3 SV=2)

HSP 1 Score: 145.976 bits (367), Expect = 1.900e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 1
Query:   70 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 297
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76          

HSP 2 Score: 145.976 bits (367), Expect = 1.900e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 1
Query:  298 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 525
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76          

HSP 3 Score: 90.5077 bits (223), Expect = 4.460e-19
Identity = 45/48 (93.75%), Postives = 46/48 (95.83%), Query Frame = 1
Query:  526 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQXRLIFAGK 669
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQ RLIFAGK
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGK 48          

HSP 4 Score: 23.483 bits (49), Expect = 4.460e-19
Identity = 9/10 (90.00%), Postives = 10/10 (100.00%), Query Frame = 3
Query:  672 LEDGRTLADY 701
            LEDGRTL+DY
Sbjct:   50 LEDGRTLSDY 59          
BLAST of FC868749 vs. ExPASy Swiss-Prot
Match: UBIQ_PLUXY (Ubiquitin OS=Plutella xylostella PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.900e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 1
Query:   70 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 297
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76          

HSP 2 Score: 145.976 bits (367), Expect = 1.900e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 1
Query:  298 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 525
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76          

HSP 3 Score: 90.5077 bits (223), Expect = 4.460e-19
Identity = 45/48 (93.75%), Postives = 46/48 (95.83%), Query Frame = 1
Query:  526 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQXRLIFAGK 669
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQ RLIFAGK
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGK 48          

HSP 4 Score: 23.483 bits (49), Expect = 4.460e-19
Identity = 9/10 (90.00%), Postives = 10/10 (100.00%), Query Frame = 3
Query:  672 LEDGRTLADY 701
            LEDGRTL+DY
Sbjct:   50 LEDGRTLSDY 59          
BLAST of FC868749 vs. ExPASy Swiss-Prot
Match: UBIQ_PIG (Ubiquitin OS=Sus scrofa GN=UBA52 PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.900e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 1
Query:   70 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 297
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76          

HSP 2 Score: 145.976 bits (367), Expect = 1.900e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 1
Query:  298 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 525
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76          

HSP 3 Score: 90.5077 bits (223), Expect = 4.460e-19
Identity = 45/48 (93.75%), Postives = 46/48 (95.83%), Query Frame = 1
Query:  526 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQXRLIFAGK 669
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQ RLIFAGK
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGK 48          

HSP 4 Score: 23.483 bits (49), Expect = 4.460e-19
Identity = 9/10 (90.00%), Postives = 10/10 (100.00%), Query Frame = 3
Query:  672 LEDGRTLADY 701
            LEDGRTL+DY
Sbjct:   50 LEDGRTLSDY 59          
BLAST of FC868749 vs. ExPASy Swiss-Prot
Match: UBIQ_PANTR (Ubiquitin OS=Pan troglodytes GN=UBB PE=1 SV=2)

HSP 1 Score: 145.976 bits (367), Expect = 1.900e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 1
Query:   70 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 297
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76          

HSP 2 Score: 145.976 bits (367), Expect = 1.900e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 1
Query:  298 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 525
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76          

HSP 3 Score: 90.5077 bits (223), Expect = 4.460e-19
Identity = 45/48 (93.75%), Postives = 46/48 (95.83%), Query Frame = 1
Query:  526 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQXRLIFAGK 669
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQ RLIFAGK
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGK 48          

HSP 4 Score: 23.483 bits (49), Expect = 4.460e-19
Identity = 9/10 (90.00%), Postives = 10/10 (100.00%), Query Frame = 3
Query:  672 LEDGRTLADY 701
            LEDGRTL+DY
Sbjct:   50 LEDGRTLSDY 59          
BLAST of FC868749 vs. ExPASy Swiss-Prot
Match: UBIQ_OPHHA (Ubiquitin OS=Ophiophagus hannah PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.900e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 1
Query:   70 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 297
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76          

HSP 2 Score: 145.976 bits (367), Expect = 1.900e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 1
Query:  298 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 525
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76          

HSP 3 Score: 90.5077 bits (223), Expect = 4.460e-19
Identity = 45/48 (93.75%), Postives = 46/48 (95.83%), Query Frame = 1
Query:  526 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQXRLIFAGK 669
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQ RLIFAGK
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGK 48          

HSP 4 Score: 23.483 bits (49), Expect = 4.460e-19
Identity = 9/10 (90.00%), Postives = 10/10 (100.00%), Query Frame = 3
Query:  672 LEDGRTLADY 701
            LEDGRTL+DY
Sbjct:   50 LEDGRTLSDY 59          
BLAST of FC868749 vs. ExPASy Swiss-Prot
Match: UBIQ_MOUSE (Ubiquitin OS=Mus musculus GN=Rps27a PE=1 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.900e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 1
Query:   70 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 297
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76          

HSP 2 Score: 145.976 bits (367), Expect = 1.900e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 1
Query:  298 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 525
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76          

HSP 3 Score: 90.5077 bits (223), Expect = 4.460e-19
Identity = 45/48 (93.75%), Postives = 46/48 (95.83%), Query Frame = 1
Query:  526 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQXRLIFAGK 669
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQ RLIFAGK
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGK 48          

HSP 4 Score: 23.483 bits (49), Expect = 4.460e-19
Identity = 9/10 (90.00%), Postives = 10/10 (100.00%), Query Frame = 3
Query:  672 LEDGRTLADY 701
            LEDGRTL+DY
Sbjct:   50 LEDGRTLSDY 59          
BLAST of FC868749 vs. ExPASy Swiss-Prot
Match: UBIQ_MANSE (Ubiquitin OS=Manduca sexta PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.900e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 1
Query:   70 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 297
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76          

HSP 2 Score: 145.976 bits (367), Expect = 1.900e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 1
Query:  298 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 525
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76          

HSP 3 Score: 90.5077 bits (223), Expect = 4.460e-19
Identity = 45/48 (93.75%), Postives = 46/48 (95.83%), Query Frame = 1
Query:  526 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQXRLIFAGK 669
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQ RLIFAGK
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGK 48          

HSP 4 Score: 23.483 bits (49), Expect = 4.460e-19
Identity = 9/10 (90.00%), Postives = 10/10 (100.00%), Query Frame = 3
Query:  672 LEDGRTLADY 701
            LEDGRTL+DY
Sbjct:   50 LEDGRTLSDY 59          
BLAST of FC868749 vs. ExPASy Swiss-Prot
Match: UBIQ_MACFA (Ubiquitin OS=Macaca fascicularis GN=UBA52 PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.900e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 1
Query:   70 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 297
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76          

HSP 2 Score: 145.976 bits (367), Expect = 1.900e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 1
Query:  298 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 525
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76          

HSP 3 Score: 90.5077 bits (223), Expect = 4.460e-19
Identity = 45/48 (93.75%), Postives = 46/48 (95.83%), Query Frame = 1
Query:  526 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQXRLIFAGK 669
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQ RLIFAGK
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGK 48          

HSP 4 Score: 23.483 bits (49), Expect = 4.460e-19
Identity = 9/10 (90.00%), Postives = 10/10 (100.00%), Query Frame = 3
Query:  672 LEDGRTLADY 701
            LEDGRTL+DY
Sbjct:   50 LEDGRTLSDY 59          
BLAST of FC868749 vs. ExPASy Swiss-Prot
Match: UBIQ_ICTPU (Ubiquitin OS=Ictalurus punctatus GN=rps27a PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.900e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 1
Query:   70 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 297
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76          

HSP 2 Score: 145.976 bits (367), Expect = 1.900e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 1
Query:  298 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 525
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76          

HSP 3 Score: 90.5077 bits (223), Expect = 4.460e-19
Identity = 45/48 (93.75%), Postives = 46/48 (95.83%), Query Frame = 1
Query:  526 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQXRLIFAGK 669
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQ RLIFAGK
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGK 48          

HSP 4 Score: 23.483 bits (49), Expect = 4.460e-19
Identity = 9/10 (90.00%), Postives = 10/10 (100.00%), Query Frame = 3
Query:  672 LEDGRTLADY 701
            LEDGRTL+DY
Sbjct:   50 LEDGRTLSDY 59          
The following BLAST results are available for this feature:
BLAST of FC868749 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 99
Match NameE-valueIdentityDescription
UBIQ_RABIT1.900e-3496.05Ubiquitin OS=Oryctolagus cuniculus PE=1 SV=1[more]
UBIQ_PONPY1.900e-3496.05Ubiquitin OS=Pongo pygmaeus GN=UBA52 PE=3 SV=2[more]
UBIQ_PLUXY1.900e-3496.05Ubiquitin OS=Plutella xylostella PE=3 SV=1[more]
UBIQ_PIG1.900e-3496.05Ubiquitin OS=Sus scrofa GN=UBA52 PE=3 SV=1[more]
UBIQ_PANTR1.900e-3496.05Ubiquitin OS=Pan troglodytes GN=UBB PE=1 SV=2[more]
UBIQ_OPHHA1.900e-3496.05Ubiquitin OS=Ophiophagus hannah PE=3 SV=1[more]
UBIQ_MOUSE1.900e-3496.05Ubiquitin OS=Mus musculus GN=Rps27a PE=1 SV=1[more]
UBIQ_MANSE1.900e-3496.05Ubiquitin OS=Manduca sexta PE=3 SV=1[more]
UBIQ_MACFA1.900e-3496.05Ubiquitin OS=Macaca fascicularis GN=UBA52 PE=3 SV=... [more]
UBIQ_ICTPU1.900e-3496.05Ubiquitin OS=Ictalurus punctatus GN=rps27a PE=3 SV... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC31004C11EF AbioticL1 Citrus clementina cDNA clone C31004C11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868749 ID=FC868749; Name=FC868749; organism=Citrus clementina; type=EST; length=707bp
GAAAAATTCTCAGATTATCTTCTCCTTTAATTCGATAAAAGGCCTCCTTC
TGTTCTCTCTGTCAAGCAGATGCAAATCTTTGTGAAAACTCTCACCGGCA
AGACAATAACCCTTGAGGTTGAAAGCTCCGACACCATTGATAATGTAAAA
GCCAAGATCCAGGACAAGGAAGGGATCCCACCAGATCAGCAGAGGCTTAT
CTTTGCTGGTAAACAGCTCGAGGATGGTCGCACACTCGCTGACTATAATA
TCCAGAAGGAATCAACCCTCCACTTGGTCCTTCGACTTAGGGGTGGTATG
CAGATCTTTGTAAAGACCCTCACTGGCAAGACGATTACTCTTGAGGTGGA
AAGCTCCGACACCATTGACAATGTGAAAGCCAAGATTCAAGACAAGGAAG
GGATCCCACCAGACCAACAGAGGCTTATCTTTGCTGGTAAACAGCTTGAG
GATGGTCGCACACTTGCTGATTATAACATCCAGAAGGAGTCAACCCTCCA
CTTGGTCCTCCGTCTCCGTGGTGGTATGCAGATCTTTGTAAAGACCCTCA
CTGGAAAGACTATCACCCTTGAGGTGGAAAGCTCCGACACCATTGACAAT
GTCAAAGCCAAAATTCAGGATAAGGAAGGGATCCCACCAGACCAGNCAAG
GCTCATCTTTGCCGGTAAACACTAGAGGATGGACGCACACTTGCAGACTA
CACATCC
back to top