FC868756

Overview
NameFC868756
Unique NameFC868756
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length715
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868756 vs. ExPASy Swiss-Prot
Match: COPA_STAAB (Copper-exporting P-type ATPase A OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=copA PE=3 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 3.272e-42
Identity = 88/219 (40.18%), Postives = 134/219 (61.19%), Query Frame = 1
Query:   58 LTLVASAEASSEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQVLVGNRKLLNESGITIPDHVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREIGIQDVMADVMPAGKADAVRSFQKDGSIVAMVGDGINDSPALAAADVGMAIGAGTDIA 714
            L L+A+AE  SEHPLA+A+V YA+                  K+ T    L + + F A+PG GI+  I    +LVGNRKL+ ++ I++P H+   +   E   +T +L+A + +L G++ +AD +K  A   ++ L  MG+   M+TGDN  TA A+A+++GI  V+AD++P  KA  +   Q+ G  VAMVGDG+ND+PAL  AD+G+AIG GT++A
Sbjct:  517 LQLLATAEKDSEHPLAEAIVNYAKE-----------------KQLT----LTETTTFKAVPGHGIEATIDHHHILVGNRKLMADNDISLPKHISDDLTHYERDGKTAMLIAVNYSLTGIIAVADTLKNHAKDAIKQLHDMGIEVAMLTGDNKNTAQAIAKQVGIDTVIADILPEEKAAQIAKLQQQGKKVAMVGDGVNDAPALVKADIGIAIGTGTEVA 714          
BLAST of FC868756 vs. ExPASy Swiss-Prot
Match: COPA_STAES (Copper-exporting P-type ATPase A OS=Staphylococcus epidermidis (strain ATCC 12228) GN=copA PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 4.274e-42
Identity = 93/219 (42.47%), Postives = 135/219 (61.64%), Query Frame = 1
Query:   58 LTLVASAEASSEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQVLVGNRKLLNESGITIPDHVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREIGIQDVMADVMPAGKADAVRSFQKDGSIVAMVGDGINDSPALAAADVGMAIGAGTDIA 714
            L L+ASAE +SEHPLA A+V YA+      D  LN               LLD   F ++PG GI+  I  +Q+LVGNRKL+N+  I+I + +   +   E   +T +++A D+ + G++ +AD VK +A   ++ L  M +  VM+TGDN RTA  +A+++GI+ V+A+V+P  KA  +   Q  G  VAMVGDGIND+PAL  AD+GMAIG G ++A
Sbjct:  516 LQLLASAENASEHPLADAIVTYAK------DKGLN---------------LLDNDTFKSIPGHGIKATIHQQQILVGNRKLMNDYNISISNKLNDQLNHYEHLGQTAMMIAVDNQINGIIAVADTVKNDAKQAIKELRNMNIDVVMLTGDNNRTAQTIAKQVGIEHVIAEVLPEEKAHQISLLQDKGKQVAMVGDGINDAPALVKADIGMAIGTGAEVA 713          
BLAST of FC868756 vs. ExPASy Swiss-Prot
Match: COPA_STAEQ (Copper-exporting P-type ATPase A OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=copA PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 4.274e-42
Identity = 93/219 (42.47%), Postives = 135/219 (61.64%), Query Frame = 1
Query:   58 LTLVASAEASSEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQVLVGNRKLLNESGITIPDHVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREIGIQDVMADVMPAGKADAVRSFQKDGSIVAMVGDGINDSPALAAADVGMAIGAGTDIA 714
            L L+ASAE +SEHPLA A+V YA+      D  LN               LLD   F ++PG GI+  I  +Q+LVGNRKL+N+  I+I + +   +   E   +T +++A D+ + G++ +AD VK +A   ++ L  M +  VM+TGDN RTA  +A+++GI+ V+A+V+P  KA  +   Q  G  VAMVGDGIND+PAL  AD+GMAIG G ++A
Sbjct:  516 LQLLASAENASEHPLADAIVTYAK------DKGLN---------------LLDNDTFKSIPGHGIKATIHQQQILVGNRKLMNDYNISISNKLNDQLNHYEHLGQTAMMIAVDNQINGIIAVADTVKNDAKQAIKELRNMNIDVVMLTGDNNRTAQTIAKQVGIEHVIAEVLPEEKAHQISLLQDKGKQVAMVGDGINDAPALVKADIGMAIGTGAEVA 713          
BLAST of FC868756 vs. ExPASy Swiss-Prot
Match: COPA_STAAW (Copper-exporting P-type ATPase A OS=Staphylococcus aureus (strain MW2) GN=copA PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 4.274e-42
Identity = 89/219 (40.64%), Postives = 134/219 (61.19%), Query Frame = 1
Query:   58 LTLVASAEASSEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQVLVGNRKLLNESGITIPDHVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREIGIQDVMADVMPAGKADAVRSFQKDGSIVAMVGDGINDSPALAAADVGMAIGAGTDIA 714
            L L+A+AE  SEHPLA+A+V YA+                  K+ T    L + + F A+PG GI+  I    +LVGNRKL+ ++ I++P H+   +   E   +T +L+A + +L G++ +AD VK  A   ++ L  MG+   M+TGDN  TA A+A+++GI  V+AD++P  KA  +   Q+ G  VAMVGDG+ND+PAL  AD+G+AIG GT++A
Sbjct:  517 LQLLATAEKDSEHPLAEAIVNYAKE-----------------KQLT----LTETTTFKAVPGHGIEATIDHHHILVGNRKLMADNDISLPKHISDDLTYYERDGKTAMLIAVNYSLTGIIAVADTVKDHAKDAIKQLHDMGIEVAMLTGDNKNTAQAIAKQVGIDTVIADILPEEKAAQIAKLQQQGKKVAMVGDGVNDAPALVKADIGIAIGTGTEVA 714          
BLAST of FC868756 vs. ExPASy Swiss-Prot
Match: COPA_STAAS (Copper-exporting P-type ATPase A OS=Staphylococcus aureus (strain MSSA476) GN=copA PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 4.274e-42
Identity = 89/219 (40.64%), Postives = 134/219 (61.19%), Query Frame = 1
Query:   58 LTLVASAEASSEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQVLVGNRKLLNESGITIPDHVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREIGIQDVMADVMPAGKADAVRSFQKDGSIVAMVGDGINDSPALAAADVGMAIGAGTDIA 714
            L L+A+AE  SEHPLA+A+V YA+                  K+ T    L + + F A+PG GI+  I    +LVGNRKL+ ++ I++P H+   +   E   +T +L+A + +L G++ +AD VK  A   ++ L  MG+   M+TGDN  TA A+A+++GI  V+AD++P  KA  +   Q+ G  VAMVGDG+ND+PAL  AD+G+AIG GT++A
Sbjct:  517 LQLLATAEKDSEHPLAEAIVNYAKE-----------------KQLT----LTETTTFKAVPGHGIEATIDHHHILVGNRKLMADNDISLPKHISDDLTYYERDGKTAMLIAVNYSLTGIIAVADTVKDHAKDAIKQLHDMGIEVAMLTGDNKNTAQAIAKQVGIDTVIADILPEEKAAQIAKLQQQGKKVAMVGDGVNDAPALVKADIGIAIGTGTEVA 714          
BLAST of FC868756 vs. ExPASy Swiss-Prot
Match: COPA_STAAE (Copper-exporting P-type ATPase A OS=Staphylococcus aureus (strain Newman) GN=copA PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 4.274e-42
Identity = 87/219 (39.73%), Postives = 131/219 (59.82%), Query Frame = 1
Query:   58 LTLVASAEASSEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQVLVGNRKLLNESGITIPDHVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREIGIQDVMADVMPAGKADAVRSFQKDGSIVAMVGDGINDSPALAAADVGMAIGAGTDIA 714
            L L+A+AE  SEHPLA+A+V YA+                          L + + F A+PG GI+  I    +LVGNRKL+ ++ I++P H+   +   E   +T +L+A + +L G++ +AD VK  A   ++ L  MG+   M+TGDN  TA A+A+++GI  V+AD++P  KA  +   Q+ G  VAMVGDG+ND+PAL  AD+G+AIG GT++A
Sbjct:  517 LQLLATAEKDSEHPLAEAIVNYAKEKQLI---------------------LTETTTFKAVPGHGIEATIDHHHILVGNRKLMADNDISLPKHISDDLTHYERDGKTAMLIAVNYSLTGIIAVADTVKDHAKDAIKQLHDMGIEVAMLTGDNKNTAQAIAKQVGIDTVIADILPEEKAAQIAKLQQQGKKVAMVGDGVNDAPALVKADIGIAIGTGTEVA 714          
BLAST of FC868756 vs. ExPASy Swiss-Prot
Match: COPA_STAAC (Copper-exporting P-type ATPase A OS=Staphylococcus aureus (strain COL) GN=copA PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 4.274e-42
Identity = 87/219 (39.73%), Postives = 131/219 (59.82%), Query Frame = 1
Query:   58 LTLVASAEASSEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQVLVGNRKLLNESGITIPDHVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREIGIQDVMADVMPAGKADAVRSFQKDGSIVAMVGDGINDSPALAAADVGMAIGAGTDIA 714
            L L+A+AE  SEHPLA+A+V YA+                          L + + F A+PG GI+  I    +LVGNRKL+ ++ I++P H+   +   E   +T +L+A + +L G++ +AD VK  A   ++ L  MG+   M+TGDN  TA A+A+++GI  V+AD++P  KA  +   Q+ G  VAMVGDG+ND+PAL  AD+G+AIG GT++A
Sbjct:  517 LQLLATAEKDSEHPLAEAIVNYAKEKQLI---------------------LTETTTFKAVPGHGIEATIDHHHILVGNRKLMADNDISLPKHISDDLTHYERDGKTAMLIAVNYSLTGIIAVADTVKDHAKDAIKQLHDMGIEVAMLTGDNKNTAQAIAKQVGIDTVIADILPEEKAAQIAKLQQQGKKVAMVGDGVNDAPALVKADIGIAIGTGTEVA 714          
BLAST of FC868756 vs. ExPASy Swiss-Prot
Match: COPA_STAA8 (Copper-exporting P-type ATPase A OS=Staphylococcus aureus (strain NCTC 8325) GN=copA PE=1 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 4.274e-42
Identity = 87/219 (39.73%), Postives = 131/219 (59.82%), Query Frame = 1
Query:   58 LTLVASAEASSEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQVLVGNRKLLNESGITIPDHVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREIGIQDVMADVMPAGKADAVRSFQKDGSIVAMVGDGINDSPALAAADVGMAIGAGTDIA 714
            L L+A+AE  SEHPLA+A+V YA+                          L + + F A+PG GI+  I    +LVGNRKL+ ++ I++P H+   +   E   +T +L+A + +L G++ +AD VK  A   ++ L  MG+   M+TGDN  TA A+A+++GI  V+AD++P  KA  +   Q+ G  VAMVGDG+ND+PAL  AD+G+AIG GT++A
Sbjct:  517 LQLLATAEKDSEHPLAEAIVNYAKEKQLI---------------------LTETTTFKAVPGHGIEATIDHHHILVGNRKLMADNDISLPKHISDDLTHYERDGKTAMLIAVNYSLTGIIAVADTVKDHAKDAIKQLHDMGIEVAMLTGDNKNTAQAIAKQVGIDTVIADILPEEKAAQIAKLQQQGKKVAMVGDGVNDAPALVKADIGIAIGTGTEVA 714          
BLAST of FC868756 vs. ExPASy Swiss-Prot
Match: COPA_STAAT (Copper-exporting P-type ATPase A OS=Staphylococcus aureus (strain USA300 / TCH1516) GN=copA PE=3 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 5.582e-42
Identity = 87/219 (39.73%), Postives = 131/219 (59.82%), Query Frame = 1
Query:   58 LTLVASAEASSEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQVLVGNRKLLNESGITIPDHVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREIGIQDVMADVMPAGKADAVRSFQKDGSIVAMVGDGINDSPALAAADVGMAIGAGTDIA 714
            L L+A+AE  SEHPLA+A+V YA+                          L + + F A+PG GI+  I    +LVGNRKL+ ++ I++P H+   +   E   +T +L+A + +L G++ +AD VK  A   ++ L  MG+   M+TGDN  TA A+A+++GI  V+AD++P  KA  +   Q+ G  VAMVGDG+ND+PAL  AD+G+AIG GT++A
Sbjct:  517 LQLLATAEKDSEHPLAEAIVNYAKEKQLI---------------------LTETTTFKAVPGHGIEATIDHHYILVGNRKLMADNDISLPKHISDDLTHYERDGKTAMLIAVNYSLTGIIAVADTVKDHAKDAIKQLHDMGIEVAMLTGDNKNTAQAIAKQVGIDTVIADILPEEKAAQIAKLQQQGKKVAMVGDGVNDAPALVKADIGIAIGTGTEVA 714          
BLAST of FC868756 vs. ExPASy Swiss-Prot
Match: COPA_STAA3 (Copper-exporting P-type ATPase A OS=Staphylococcus aureus (strain USA300) GN=copA PE=3 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 5.582e-42
Identity = 87/219 (39.73%), Postives = 131/219 (59.82%), Query Frame = 1
Query:   58 LTLVASAEASSEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQVLVGNRKLLNESGITIPDHVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREIGIQDVMADVMPAGKADAVRSFQKDGSIVAMVGDGINDSPALAAADVGMAIGAGTDIA 714
            L L+A+AE  SEHPLA+A+V YA+                          L + + F A+PG GI+  I    +LVGNRKL+ ++ I++P H+   +   E   +T +L+A + +L G++ +AD VK  A   ++ L  MG+   M+TGDN  TA A+A+++GI  V+AD++P  KA  +   Q+ G  VAMVGDG+ND+PAL  AD+G+AIG GT++A
Sbjct:  517 LQLLATAEKDSEHPLAEAIVNYAKEKQLI---------------------LTETTTFKAVPGHGIEATIDHHYILVGNRKLMADNDISLPKHISDDLTHYERDGKTAMLIAVNYSLTGIIAVADTVKDHAKDAIKQLHDMGIEVAMLTGDNKNTAQAIAKQVGIDTVIADILPEEKAAQIAKLQQQGKKVAMVGDGVNDAPALVKADIGIAIGTGTEVA 714          
The following BLAST results are available for this feature:
BLAST of FC868756 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 258
Match NameE-valueIdentityDescription
COPA_STAAB3.272e-4240.18Copper-exporting P-type ATPase A OS=Staphylococcus... [more]
COPA_STAES4.274e-4242.47Copper-exporting P-type ATPase A OS=Staphylococcus... [more]
COPA_STAEQ4.274e-4242.47Copper-exporting P-type ATPase A OS=Staphylococcus... [more]
COPA_STAAW4.274e-4240.64Copper-exporting P-type ATPase A OS=Staphylococcus... [more]
COPA_STAAS4.274e-4240.64Copper-exporting P-type ATPase A OS=Staphylococcus... [more]
COPA_STAAE4.274e-4239.73Copper-exporting P-type ATPase A OS=Staphylococcus... [more]
COPA_STAAC4.274e-4239.73Copper-exporting P-type ATPase A OS=Staphylococcus... [more]
COPA_STAA84.274e-4239.73Copper-exporting P-type ATPase A OS=Staphylococcus... [more]
COPA_STAAT5.582e-4239.73Copper-exporting P-type ATPase A OS=Staphylococcus... [more]
COPA_STAA35.582e-4239.73Copper-exporting P-type ATPase A OS=Staphylococcus... [more]

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Properties
Property NameValue
Genbank descriptionC31004D06EF AbioticL1 Citrus clementina cDNA clone C31004D06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868756 ID=FC868756; Name=FC868756; organism=Citrus clementina; type=EST; length=715bp
GGGAGAGCTACTGTTACAACTGCTAAGGTTTTCACGAAAATGGATCGTGG
TGAATTTCTTACATTGGTGGCTTCAGCAGAGGCTAGCAGTGAACATCCAT
TGGCCAAAGCAGTTGTGGAGTATGCACGTCATTTCCATTTCTTTGATGAT
CCCTCTTTGAACCCCGATGGCCAAAGCCACAGCAAAGAGTCCACTGGTTC
TGGATGGCTTCTTGATGTCTCGGATTTCTCTGCTCTGCCTGGAAGAGGTA
TCCAGTGCTTTATAAGTGGAAAACAGGTTTTGGTGGGTAACCGGAAGTTG
CTGAATGAAAGTGGAATCACCATTCCAGACCATGTAGAAAGTTTTGTTGT
GGAACTGGAGGAAAGTGCTAGGACGGGCATACTTGTTGCGTATGATGATA
ACTTGATCGGTGTTATGGGAATTGCTGACCCAGTTAAGAGGGAAGCTGCT
GTAGTTGTAGAGGGCCTTTTAAAAATGGGTGTGAGACCCGTCATGGTAAC
TGGAGATAATTGGAGGACAGCGCATGCTGTTGCTAGAGAGATCGGCATTC
AAGATGTGATGGCAGATGTAATGCCAGCAGGAAAAGCTGATGCCGTCCGC
TCATTTCAGAAAGACGGAAGCATAGTAGCTATGGTTGGGGATGGAATCAA
TGATTCTCCAGCTCTAGCTGCGGCTGATGTTGGTATGGCTATTGGGGCAG
GTACAGATATTGCCA
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