FC868756
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868756 vs. ExPASy Swiss-Prot
Match: CTPF_MYCBO (Probable cation-transporting ATPase F OS=Mycobacterium bovis GN=ctpF PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.861e-12 Identity = 47/147 (31.97%), Postives = 71/147 (48.30%), Query Frame = 1 Query: 391 YDDNLI-------GVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREIGIQD-------------------------------VMADVMPAGKADAVRSFQKDGSIVAMVGDGINDSPALAAADVGMAIG-AGTDIA 714 +D+N+I G+ ++DP + AA V G+ M+TGD+ TA A+A E+G+ D V A V P K V++ Q G +VAM GDG+ND+PAL A++G+A+G GT++A Sbjct: 522 FDENVIPGSLALTGLQAMSDPPRAAAASAVAACHSAGIAVKMITGDHAGTATAIATEVGLLDNTEPAAGSVLTGAELAALSADQYPEAVDTASVFARVSPEQKLRLVQALQARGHVVAMTGDGVNDAPALRQANIGVAMGRGGTEVA 668
BLAST of FC868756 vs. ExPASy Swiss-Prot
Match: ATCL_MYCGE (Probable cation-transporting P-type ATPase OS=Mycoplasma genitalium GN=pacL PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.027e-11 Identity = 40/124 (32.26%), Postives = 65/124 (52.42%), Query Frame = 1 Query: 406 IGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREIGI--------------------QDVMADVMPAGKADAVRSFQKDGSIVAMVGDGINDSPALAAADVGMAIG-AGTDIA 714 +G + + DP ++E+ + K + P+M+TGD+ +TA +A+E+GI V A V P K V ++++ G V++ GDG+ND+PAL +DVG +G G DIA Sbjct: 491 LGFVSLQDPPRKESKEAILACKKANITPIMITGDHLKTATVIAKELGILTLDNQAVLGSELDEKKILDYRVFARVTPQQKLAIVSAWKEAGFTVSVTGDGVNDAPALIKSDVGCCMGITGVDIA 614
BLAST of FC868756 vs. ExPASy Swiss-Prot
Match: AT2C2_HUMAN (Calcium-transporting ATPase type 2C member 2 OS=Homo sapiens GN=ATP2C2 PE=1 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 1.341e-11 Identity = 54/178 (30.34%), Postives = 83/178 (46.63%), Query Frame = 1 Query: 298 LLNESGITIPDHVESFVVELEESARTGIL------VAYDDNL-----IGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREIGIQDVMADVMPAGKADAV---------------------------RSFQKDGSIVAMVGDGINDSPALAAADVGMAIG-AGTDIA 714 + N GI +P + L+E R G L +A L +G++GI DP + V+ L + GV M+TGD TA A+ R IG+ + M + D+V ++ Q+ G+IVAM GDG+ND+ AL +AD+G+A+G GTD++ Sbjct: 522 MYNNGGIPLPLTPQQRSFCLQEEKRMGSLGLRVLALASGPELGRLTFLGLVGIIDPPRVGVKEAVQVLSESGVSVKMITGDALETALAIGRNIGLCNGKLQAMSGEEVDSVEKGELADRVGKVSVFFRTSPKHKLKIIKALQESGAIVAMTGDGVNDAVALKSADIGIAMGQTGTDVS 699
BLAST of FC868756 vs. ExPASy Swiss-Prot
Match: ACA1_ARATH (Calcium-transporting ATPase 1, chloroplastic OS=Arabidopsis thaliana GN=ACA1 PE=1 SV=3) HSP 1 Score: 69.707 bits (169), Expect = 1.751e-11 Identity = 64/216 (29.63%), Postives = 92/216 (42.59%), Query Frame = 1 Query: 235 LPGRGIQCFISGKQVLVGNR--KLLNESGITIP------DHVESFVVELEESARTGILVAYDD----------------NLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREIGI---------------------------QDVMADVMPAGKADAVR----SFQKDGSIVAMVGDGINDSPALAAADVGMAIG-AGTDIA 714 LP R + G +V + K +N+ G +P H+++ + E A + +AY + IG++GI DPV+ V G+ MVTGDN TA A+ARE GI VMA P K VR FQ+ +VA+ GDG ND+PAL AD+G+A+G +GT++A Sbjct: 571 LPERHFRAHCKGASEIVLDSCDKYINKDGEVVPLDEKSTSHLKNIIEEFASEALRTLCLAYFEIGDEFSLEAPIPSGGYTCIGIVGIKDPVRPGVKESVAICKSAGITVRMVTGDNLTTAKAIARECGILTDDGIAIEGPEFREKSDEELLKLIPKLQVMARSSPMDKHTLVRLLRTMFQE---VVAVTGDGTNDAPALHEADIGLAMGISGTEVA 783
BLAST of FC868756 vs. ExPASy Swiss-Prot
Match: ACA2_ORYSJ (Calcium-transporting ATPase 2, plasma membrane-type OS=Oryza sativa subsp. japonica GN=Os03g0616400 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.287e-11 Identity = 61/219 (27.85%), Postives = 88/219 (40.18%), Query Frame = 1 Query: 217 VSDFSALPGRGIQCFISGKQ--VLVGNRKLLNESGITIP------DHVESFVVELEESARTGILVAYDD----------------NLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREIGI---------------------------QDVMADVMPAGKADAVRSFQKD-GSIVAMVGDGINDSPALAAADVGMAIG-AGTDIA 714 +S LPG G + G VL K ++E G +P + + A + +AY + IG++GI DPV+ V G+ M+TGDN TA A+ARE GI V+A P K V+ + +VA+ GDG ND+PAL AD+G+A+G AGT++A Sbjct: 569 MSTILELPGGGYRAHCKGASEIVLAACDKFIDERGCIVPLDDKTSSKLNDIIKAFSSEALRTLCLAYREMEEGFSTQEQIPLQGYTCIGIVGIKDPVRPGVRQSVATCRSAGISVRMITGDNIDTAKAIARECGILTKDGIAIEGAEFREKSAEELHDLIPKMQVLARSSPLDKHTLVKHLRTAFNEVVAVTGDGTNDAPALREADIGLAMGIAGTEVA 787
BLAST of FC868756 vs. ExPASy Swiss-Prot
Match: ATC_TRYBB (Probable calcium-transporting ATPase OS=Trypanosoma brucei brucei GN=TBA1 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.901e-11 Identity = 41/141 (29.08%), Postives = 64/141 (45.39%), Query Frame = 1 Query: 385 VAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREIGIQDVMADVM-------------------------------PAGKADAVRSFQKDGSIVAMVGDGINDSPALAAADVGMAIGAGTDIA 714 V D +G G+ DP + E + G+R V++TGD TA A+ ++G+ AD P+ K V+ + + I AM GDG+ND+PAL AD+G+A+G+GT++A Sbjct: 586 VESDLTFVGACGMLDPPREEVRDAIVKCRTAGIRVVVITGDRKETAEAICCKLGLLSSTADTTGLSYTGQELDAMTPAQKREAVLTAVLFSRTDPSHKMQLVQLLKDERLICAMTGDGVNDAPALKKADIGIAMGSGTEVA 726
BLAST of FC868756 vs. ExPASy Swiss-Prot
Match: ACA6_ORYSJ (Probable calcium-transporting ATPase 6, plasma membrane-type OS=Oryza sativa subsp. japonica GN=Os05g0495600 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.095e-11 Identity = 60/212 (28.30%), Postives = 89/212 (41.98%), Query Frame = 1 Query: 235 LPGRGIQCFISGKQVLVGNR--KLLNESGITIP------DHVESFVVELEESARTGILVAYDD---------------NLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREIGIQ---------------------------DVMADVMPAGKADAVRSFQK-DGSIVAMVGDGINDSPALAAADVGMAIG-AGTDIA 714 LP GI+ F G ++ + + N G +P +V + + A + +A+ D LI V GI DPV+ V + G+R MVTGDN TA A+A+E GI V+A +P K V S + +VA+ GDG ND+PAL +D+G+A+G GT++A Sbjct: 554 LPNGGIRTFCKGASEIILEQCNTIHNTDGNIVPLSEMQKHNVLNIINSFASEALRTLCIAFKDMDEFPNDQPISDDGYTLIAVFGIKDPVRPGVKDAVRTCMAAGIRVRMVTGDNINTAKAIAKECGILTEDGIAIEGQQLNNKSSDELKELLPKIQVIARSLPMDKYKLVTSLKSMYQEVVAVTGDGTNDAPALHESDIGLAMGITGTEVA 765
BLAST of FC868756 vs. ExPASy Swiss-Prot
Match: AHM1_ARATH (Probable cadmium/zinc-transporting ATPase HMA1, chloroplastic OS=Arabidopsis thaliana GN=HMA1 PE=1 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 6.655e-11 Identity = 59/229 (25.76%), Postives = 105/229 (45.85%), Query Frame = 1 Query: 52 EFLTLVASAEASSEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQVLVGNRKLLNESGITIPDHVESFVVELEESARTGILVAYD-------------DNLIGVMGIADPVKREAAVVVEGLLKMG-VRPVMVTGDNWRTAHAVAREIGIQDVMADVMPAGKADAVRSFQKD-GSIVAMVGDGINDSPALAAADVGMAI 693 E L + A+ E + HP+ +AVV++ S+ D S + V F PGRG+ ++G + V L ++ + + + S +ES + V D + ++ + D + + V+ L +R +M+TGD+ +A VA +GI +V ++ P K + V++ ++ G + MVG+GIND+PALAAA VG+ + Sbjct: 493 EALAVAAAMEKGTTHPIGRAVVDH----------SVGKDLPS-----------IFVESFEYFPGRGLTATVNGVKT-VAEESRLRKASLGSIEFITSLFKSEDESKQIKDAVNASSYGKDFVHAALSVDQKVTLIHLEDQPRPGVSGVIAELKSWARLRVMMLTGDHDSSAWRVANAVGITEVYCNLKPEDKLNHVKNIAREAGGGLIMVGEGINDAPALAAATVGIVL 699 The following BLAST results are available for this feature:
BLAST of FC868756 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 258
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868756 ID=FC868756; Name=FC868756; organism=Citrus clementina; type=EST; length=715bpback to top |