FC868756
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868756 vs. ExPASy Swiss-Prot
Match: COPB_STAAR (Probable copper-transporting P-type ATPase B OS=Staphylococcus aureus (strain MRSA252) GN=copB PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 3.394e-31 Identity = 80/239 (33.47%), Postives = 131/239 (54.81%), Query Frame = 1 Query: 1 GRATVTTAKVFT-KMDRGEFLTLVASAEASSEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQVLVGNRKLLNESGITIPDHVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREIGIQDVMADVMPAGKADAVRSFQKDGSIVAMVGDGINDSPALAAADVGMAIGAGTDIA 714 G +V + FT +++ E L+L AS E++S HPLA +V++A+ G++ S + + + +PG G++ + K++ + N L++S D+ + L + + + +D +IG++ D +K + +V LL + PVM+TGDN A VA E+GI DV A +MP K ++ +Q +GS + MVGDGIND+P+L AD+GMAIGAGTD+A Sbjct: 382 GNFSVNHYESFTDELNNEEILSLFASLESNSNHPLATGIVDFAK-------------GKNISYATP--------QEVNNIPGVGLEGTVDNKKLKIVNVSYLDKSNF---DYNKEQFTNLAQQGNSISYLIHDRQVIGIIAQGDKIKESSKQMVSDLLSRNITPVMLTGDNKEVAQTVAEELGISDVHAQLMPEDKESIIQDYQSNGSKIMMVGDGINDAPSLIRADIGMAIGAGTDVA 596
BLAST of FC868756 vs. ExPASy Swiss-Prot
Match: COPB_STAHJ (Probable copper-transporting P-type ATPase B OS=Staphylococcus haemolyticus (strain JCSC1435) GN=copB PE=3 SV=2) HSP 1 Score: 134.806 bits (338), Expect = 4.433e-31 Identity = 77/220 (35.00%), Postives = 120/220 (54.55%), Query Frame = 1 Query: 58 LTLVASAEASSEHPLAKAVVEYARHFHF-FDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQVLVGNRKLLNESGITIPDHVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREIGIQDVMADVMPAGKADAVRSFQKDGSIVAMVGDGINDSPALAAADVGMAIGAGTDIA 714 L+L AS E+ S HPLA ++V++ + + F +P D + +PG G++ I K + N L++ G ++ ++L + + + D +IG++ D +K + +V LL + PVM+TGDN AHAVA+E+GI DV A +MP K ++ +Q DG+ V MVGDGIND+P+L AD+G+AIGAGTD+A Sbjct: 395 LSLFASLESQSNHPLAISIVDFTKSKNVSFTNPQ----------------------DVNNIPGVGLEGLIDNKTYKITNVSYLDQHGF---EYDNDLFIKLAQQGNSISYLIEDQQVIGMIAQGDQIKESSKQMVADLLSRHITPVMLTGDNDEVAHAVAKELGISDVHAQLMPEDKESIIKDYQSDGNKVMMVGDGINDAPSLIRADIGIAIGAGTDVA 589
BLAST of FC868756 vs. ExPASy Swiss-Prot
Match: COPB_STAEQ (Probable copper-transporting P-type ATPase B OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=copB PE=3 SV=2) HSP 1 Score: 134.806 bits (338), Expect = 4.433e-31 Identity = 77/220 (35.00%), Postives = 121/220 (55.00%), Query Frame = 1 Query: 58 LTLVASAEASSEHPLAKAVVEYARHFHF-FDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQVLVGNRKLLNESGITIPDHVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREIGIQDVMADVMPAGKADAVRSFQKDGSIVAMVGDGINDSPALAAADVGMAIGAGTDIA 714 L+L AS E+ S HPLA ++V++A+ + F +P D + +PG G++ I K + N L++ G ++ ++L + + + D +IG++ D +K + +V LL + PVM+TGDN AHAVA+E+GI DV A +MP K ++ +Q +G+ V MVGDGIND+P+L AD+G+AIGAGTD+A Sbjct: 395 LSLFASLESQSNHPLAISIVDFAKSKNVSFTNPQ----------------------DVNNIPGVGLEGLIHNKTYKITNVSYLDQHGF---EYDNDLFIKLAQQGNSISYLIEDQQVIGMIAQGDQIKESSKQMVADLLSRNITPVMLTGDNNEVAHAVAKELGISDVHAQLMPEDKESIIKDYQSNGNKVMMVGDGINDAPSLIRADIGIAIGAGTDVA 589
BLAST of FC868756 vs. ExPASy Swiss-Prot
Match: CTPC_MYCLE (Probable cation-transporting P-type ATPase C OS=Mycobacterium leprae GN=ctpC PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 5.789e-31 Identity = 88/241 (36.51%), Postives = 124/241 (51.45%), Query Frame = 1 Query: 1 GRATVTTAKVFTK-MDRGEFLTLVASAEASSEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQVLVGNRKLLNESGITIPDHVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRP-VMVTGDNWRTAHAVAREIGIQDVMADVMPAGKADAVRSFQKDGSIVAMVGDGINDSPALAAADVGMAIG-AGTDIA 714 GR VT K + L AS+E S HPLA+AV+ H P + L G G++ + G+ +L+G+ LL + + +V +L T +L A D L+G++ + D V+ EAA V+ L GVR VM+TGD+ A AVA E+GI + A+VMP K VR Q +G +V MVGDG+ND+PALAAAD+G+A+G AGTD+A Sbjct: 424 GRPVVTNIVAMHKDWSPEQVLAYAASSEIHSRHPLAEAVIRSTEERHISIPPH---------------------EECEVLVGLGMRTWADGRTLLLGSPSLLCAEKVKVSKTASEWVDKLRHQTETPLLFAVDGTLVGLISLRDEVRPEAAEVLTKLRASGVRRIVMLTGDHPDIAKAVATELGIDEWRAEVMPEDKLKVVRDLQNEGYVVGMVGDGVNDAPALAAADIGIAMGLAGTDVA 643
BLAST of FC868756 vs. ExPASy Swiss-Prot
Match: COPB_STAAT (Probable copper-transporting P-type ATPase B OS=Staphylococcus aureus (strain USA300 / TCH1516) GN=copB PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 5.789e-31 Identity = 80/223 (35.87%), Postives = 122/223 (54.71%), Query Frame = 1 Query: 58 LTLVASAEASSEHPLAKAVVEYARHFHF-FDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQVLVGNRKLLNESGITIPDHVESFVVELEESARTGILVAY---DDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREIGIQDVMADVMPAGKADAVRSFQKDGSIVAMVGDGINDSPALAAADVGMAIGAGTDIA 714 L+L AS E+ S HPLA ++V++A+ + F +P D + +PG G++ I K + N L++ + D + + A+ G ++Y D +IG++ D +K + +V LL + PVM+TGDN AHAVA+E+GI DV A +MP K ++ +Q DG+ V MVGDGIND+P+L AD+G+AIGAGTD+A Sbjct: 395 LSLFASLESQSNHPLAISIVDFAKSKNVSFTNPQ----------------------DVNNIPGVGLEGLIDNKTYKITNVSYLDKHKLNYDDDL------FTKLAQQGNSISYLIEDQQVIGMIAQGDQIKESSKQMVADLLSRNITPVMLTGDNNEVAHAVAKELGISDVHAQLMPEDKESIIKDYQSDGNKVMMVGDGINDAPSLIRADIGIAIGAGTDVA 589
BLAST of FC868756 vs. ExPASy Swiss-Prot
Match: COPB_STAA3 (Probable copper-transporting P-type ATPase B OS=Staphylococcus aureus (strain USA300) GN=copB PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 5.789e-31 Identity = 80/223 (35.87%), Postives = 122/223 (54.71%), Query Frame = 1 Query: 58 LTLVASAEASSEHPLAKAVVEYARHFHF-FDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQVLVGNRKLLNESGITIPDHVESFVVELEESARTGILVAY---DDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREIGIQDVMADVMPAGKADAVRSFQKDGSIVAMVGDGINDSPALAAADVGMAIGAGTDIA 714 L+L AS E+ S HPLA ++V++A+ + F +P D + +PG G++ I K + N L++ + D + + A+ G ++Y D +IG++ D +K + +V LL + PVM+TGDN AHAVA+E+GI DV A +MP K ++ +Q DG+ V MVGDGIND+P+L AD+G+AIGAGTD+A Sbjct: 395 LSLFASLESQSNHPLAISIVDFAKSKNVSFTNPQ----------------------DVNNIPGVGLEGLIDNKTYKITNVSYLDKHKLNYDDDL------FTKLAQQGNSISYLIEDQQVIGMIAQGDQIKESSKQMVADLLSRNITPVMLTGDNNEVAHAVAKELGISDVHAQLMPEDKESIIKDYQSDGNKVMMVGDGINDAPSLIRADIGIAIGAGTDVA 589
BLAST of FC868756 vs. ExPASy Swiss-Prot
Match: CADA_STAAR (Probable cadmium-transporting ATPase OS=Staphylococcus aureus (strain MRSA252) GN=cadA PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.290e-30 Identity = 78/242 (32.23%), Postives = 137/242 (56.61%), Query Frame = 1 Query: 1 GRATVTTAKVFT-KMDRGEFLTLVASAEASSEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQVLVGNRKLLNESGIT-IPDHVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRP-VMVTGDNWRTAHAVAREIGIQDVMADVMPAGKADAVRSFQKDGSIVAMVGDGINDSPALAAADVGMAI-GAGTDIA 714 G VT KV +++ E +++ + E S+HPLA A+++ A D ++S + V DF+++ GRGIQ I G +G+ +L E ++ E+ V L+ +T +++ D ++GV+ +AD V+ + V++ L ++G++ +M+TGDN TA A+ +G+ D+ +++MP K D ++ + + VAM+GDG+ND+PALAA+ VG+A+ GAGTD A Sbjct: 422 GVPVVTDFKVLNDQVEEKELFSIITALEYRSQHPLASAIMKKAEQ-----------DNITYSD--------VRVEDFTSITGRGIQGNIDGTTYYIGSPRLFKELNVSDFSLEFENKVKVLQNQGKTAMIIGTDQTILGVIAVADEVRETSKNVIQKLHQLGIKQTIMLTGDNQGTAEAIGAHVGVSDIQSELMPQDKLDYIKKMKAEHGNVAMIGDGVNDAPALAASTVGIAMGGAGTDTA 644
BLAST of FC868756 vs. ExPASy Swiss-Prot
Match: COPB_STAES (Probable copper-transporting P-type ATPase B OS=Staphylococcus epidermidis (strain ATCC 12228) GN=copB PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.200e-30 Identity = 79/223 (35.43%), Postives = 122/223 (54.71%), Query Frame = 1 Query: 58 LTLVASAEASSEHPLAKAVVEYARHFHF-FDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQVLVGNRKLLNESGITIPDHVESFVVELEESARTGILVAY---DDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREIGIQDVMADVMPAGKADAVRSFQKDGSIVAMVGDGINDSPALAAADVGMAIGAGTDIA 714 L+L AS E+ S HPLA ++V++A+ + F +P D + +PG G++ I K + N L++ + D + + A+ G ++Y D +IG++ D +K + +V LL + PVM+TGDN AHAVA+E+GI DV A +MP K ++ +Q +G+ V MVGDGIND+P+L AD+G+AIGAGTD+A Sbjct: 395 LSLFASLESQSNHPLAISIVDFAKSKNVSFTNPQ----------------------DVNNIPGVGLEGLIDNKTYKITNVSYLDKHKLNYDDDL------FTKLAQQGNSISYLIEDQQVIGMIAQGDQIKESSKQMVADLLSRNITPVMLTGDNNEVAHAVAKELGISDVHAQLMPEDKESIIKDYQSNGNKVMMVGDGINDAPSLIRADIGIAIGAGTDVA 589
BLAST of FC868756 vs. ExPASy Swiss-Prot
Match: CTPB_MYCTU (Cation-transporting P-type ATPase B OS=Mycobacterium tuberculosis GN=ctpB PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 4.901e-30 Identity = 87/240 (36.25%), Postives = 125/240 (52.08%), Query Frame = 1 Query: 7 ATVTTAKVFT-KMDRGEFLTLVASAEASSEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQVLVGNRKLLNESGITIPDHVESFV---VELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREIGIQDVMADVMPAGKADAVRSFQKDGSIVAMVGDGINDSPALAAADVGMAIGAGTDIA 714 +TVT A T + DR E L L A+ E++SEH +A A+V + P P V+ F A+ G G+ + G V VG + T P H + V ++ E T + V+ D + + IAD +K AA V L G+R +++TGDN A AVA ++GI +AD++P GK D ++ +++G VAMVGDGIND PAL AD+G+AIG GTD+A Sbjct: 459 STVTMAGSGTSERDREEVLGLAAAVESASEHAMAAAIVAAS--------PDPGP-----------------VNGFVAVAGCGVSGEVGGHHVEVGKPSWITR---TTPCHDAALVSARLDGESRGETVVFVSVDGVVRAALTIADTLKDSAAAAVAALRSRGLRTILLTGDNRAAADAVAAQVGIDSAVADMLPEGKVDVIQRLREEGHTVAMVGDGINDGPALVGADLGLAIGRGTDVA 670
BLAST of FC868756 vs. ExPASy Swiss-Prot
Match: CTPB_MYCBO (Cation-transporting P-type ATPase B OS=Mycobacterium bovis GN=ctpB PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 4.901e-30 Identity = 87/240 (36.25%), Postives = 125/240 (52.08%), Query Frame = 1 Query: 7 ATVTTAKVFT-KMDRGEFLTLVASAEASSEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQVLVGNRKLLNESGITIPDHVESFV---VELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREIGIQDVMADVMPAGKADAVRSFQKDGSIVAMVGDGINDSPALAAADVGMAIGAGTDIA 714 +TVT A T + DR E L L A+ E++SEH +A A+V + P P V+ F A+ G G+ + G V VG + T P H + V ++ E T + V+ D + + IAD +K AA V L G+R +++TGDN A AVA ++GI +AD++P GK D ++ +++G VAMVGDGIND PAL AD+G+AIG GTD+A Sbjct: 459 STVTMAGSGTSERDREEVLGLAAAVESASEHAMAAAIVAAS--------PDPGP-----------------VNGFVAVAGCGVSGEVGGHHVEVGKPSWITR---TTPCHDAALVSARLDGESRGETVVFVSVDGVVRAALTIADTLKDSAAAAVAALRSRGLRTILLTGDNRAAADAVAAQVGIDSAVADMLPEGKVDVIQRLREEGHTVAMVGDGINDGPALVGADLGLAIGRGTDVA 670 The following BLAST results are available for this feature:
BLAST of FC868756 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 258
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868756 ID=FC868756; Name=FC868756; organism=Citrus clementina; type=EST; length=715bpback to top |