FC868756

Overview
NameFC868756
Unique NameFC868756
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length715
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868756 vs. ExPASy Swiss-Prot
Match: CADA2_STAAU (Probable cadmium-transporting ATPase OS=Staphylococcus aureus GN=cadA PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.092e-29
Identity = 77/242 (31.82%), Postives = 136/242 (56.20%), Query Frame = 1
Query:    1 GRATVTTAKVFT-KMDRGEFLTLVASAEASSEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQVLVGNRKLLNESGIT-IPDHVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRP-VMVTGDNWRTAHAVAREIGIQDVMADVMPAGKADAVRSFQKDGSIVAMVGDGINDSPALAAADVGMAI-GAGTDIA 714
            G   VT  KV   +++  E  +++ + E  S+HPLA A+++ A             D  ++S         + V DF+++ GRGIQ  I G    +G+ +L  E  ++      E+ V  L+   +T +++  D  ++GV+ +AD V+  +  V+  L ++G++  +M+TGDN  TA A+   +G+ D+ ++++P  K D ++  + +   VAM+GDG+ND+PALAA+ VG+A+ GAGTD A
Sbjct:  500 GVPVVTDFKVLNDQVEEKELFSIITALEYRSQHPLASAIMKKAEQ-----------DNITYSD--------VRVKDFTSITGRGIQGNIDGTTYYIGSPRLFKELNVSDFSLEFENKVKVLQNQGKTAMIIGTDQTILGVIAVADEVRETSKNVILKLHQLGIKQTIMLTGDNQGTAEAIGAHVGVSDIQSELLPQDKLDYIKKMKAEHGNVAMIGDGVNDAPALAASTVGIAMGGAGTDTA 722          
BLAST of FC868756 vs. ExPASy Swiss-Prot
Match: CADA1_STAAU (Probable cadmium-transporting ATPase OS=Staphylococcus aureus GN=cadA PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.092e-29
Identity = 75/242 (30.99%), Postives = 138/242 (57.02%), Query Frame = 1
Query:    1 GRATVTTAKVFT-KMDRGEFLTLVASAEASSEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQVLVGNRKLLNESGIT-IPDHVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRP-VMVTGDNWRTAHAVAREIGIQDVMADVMPAGKADAVRSFQKDGSIVAMVGDGINDSPALAAADVGMAI-GAGTDIA 714
            G   VT  +V   +++  E  +++ + E  S+HPLA A+++ A             D   +S         + V +F+++ GRGI+  ++G    +G+ KL  E  ++      E+ V  L+   +T +++  +  ++GV+ +AD V+  +  V++ L ++G++  +M+TGDN  TA+A+   +G+ D+ +++MP  K D ++  Q +   VAM+GDG+ND+PALAA+ VG+A+ GAGTD A
Sbjct:  423 GVPVVTDFEVLNDQVEEKELFSIITALEYRSQHPLASAIMKKAEQ-----------DNIPYSN--------VQVEEFTSITGRGIKGIVNGTTYYIGSPKLFKELNVSDFSLGFENNVKILQNQGKTAMIIGTEKTILGVIAVADEVRETSKNVIQKLHQLGIKQTIMLTGDNQGTANAIGTHVGVSDIQSELMPQDKLDYIKKMQSEYDNVAMIGDGVNDAPALAASTVGIAMGGAGTDTA 645          
BLAST of FC868756 vs. ExPASy Swiss-Prot
Match: CADA_BACPF (Probable cadmium-transporting ATPase OS=Bacillus pseudofirmus GN=cadA PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.426e-29
Identity = 77/243 (31.69%), Postives = 137/243 (56.38%), Query Frame = 1
Query:    1 GRATVTTAKVFTK-MDRGEFLTLVASAEASSEHPLAKAVVEYARHFHF-FDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQVLVGNRKLLNESGITIPDH-VESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRP-VMVTGDNWRTAHAVAREIGIQDVMADVMPAGKADAVRSFQKDGSIVAMVGDGINDSPALAAADVGMAI-GAGTDIA 714
            G   VT   V  K ++  E L+++ + E  S+HPLA A+++ A   +  + D                    + V DFS++ G+GI+  ++G    +G+ KL  E      D  +E  V  L+   +T +++  +  ++ V+ +AD V+  +  +++ L ++G++  +M+TGDN  TA+A+  ++G+ D+ A++MP  K D ++  + +   VAMVGDG+ND+PALAA+ VG+A+ GAGTD A
Sbjct:  420 GVPAVTDYNVLNKQINEKELLSIITALEYRSQHPLASAIMKKAEEENITYSD--------------------VQVEDFSSITGKGIKGIVNGTTYYIGSPKLFKELLTNDFDKDLEQNVTTLQNQGKTAMIIGTEKEILAVIAVADEVRESSKEILQKLHQLGIKKTIMLTGDNKGTANAIGGQVGVSDIEAELMPQDKLDFIKQLRSEYGNVAMVGDGVNDAPALAASTVGIAMGGAGTDTA 642          
BLAST of FC868756 vs. ExPASy Swiss-Prot
Match: ZOSA_BACSU (Zinc-transporting ATPase OS=Bacillus subtilis GN=zosA PE=1 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.432e-29
Identity = 76/238 (31.93%), Postives = 126/238 (52.94%), Query Frame = 1
Query:    1 GRATVTTAKVFTKMDRGEFLTLVASAEASSEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQVLVGNRKLLNESGITIPDHVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREIGIQDVMADVMPAGKADAVRSFQKDGSIVAMVGDGINDSPALAAADVGMAIGAGTDIA 714
            G+  V T ++       E L  V + E  S HPLA+A+  YA      +   +N  G    +E++G G + +VS               G +  VG    + E        ++    ++ +S  T + V  DD + G + + D ++ EA  V+E L ++G++  M+TGD+  TA A+A+E G+  V+A+ +P  K + ++  +++   +AMVGDGIND+PAL AADVG+A+G GTD+A
Sbjct:  345 GQPAVETIRIAEGFSEAEVLEAVYAIETQSSHPLAQAITAYA------ESRGVNQSGYISIEETSGFGVMAEVS---------------GAKWKVGKAGFIGEE--MAAQFMKQTASDVIQSGHTIVFVKKDDQIAGCIALKDQIRPEAKEVMEELNRLGIKTAMLTGDHEDTAQAIAKEAGMTTVVAECLPDQKVNEIKRLKEEFGTIAMVGDGINDAPALKAADVGIAMGGGTDVA 559          
BLAST of FC868756 vs. ExPASy Swiss-Prot
Match: CTPB_MYCLE (Cation-transporting P-type ATPase B OS=Mycobacterium leprae GN=ctpB PE=3 SV=2)

HSP 1 Score: 127.872 bits (320), Expect = 5.419e-29
Identity = 84/240 (35.00%), Postives = 120/240 (50.00%), Query Frame = 1
Query:    1 GRATVTTAKVFTKMDRGEFLTLVASAEASSEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQVLVGNRKLLNESGITIPDHV--ESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREIGIQDVMADVMPAGKADAVRSFQKDGSIVAMVGDGINDSPALAAADVGMAIGAGTDIA 714
            G+ +V+T         GE L L ++ EA+SEH +A A+V        + DP                     V+DF A  G G+   ++   V +G    +  +    P  V  ES   E E    T + V+ D    G + IAD VK  AA  +  L   G+  +++TGDN   A AVA ++GI  V+AD++P  K D ++  +  G  VAMVGDGIND PALA AD+G+A+G GTD+A
Sbjct:  453 GQLSVSTVTSTGGWCSGEVLALASAVEAASEHSVATAIVAA------YADPR-------------------PVADFVAFAGCGVSGVVAEHHVKIGKPSWVTRNA---PCDVVLESARREGESRGETVVFVSVDGVACGAVAIADTVKDSAADAISALCSRGLHTILLTGDNQAAARAVAAQVGIDTVIADMLPEAKVDVIQRLRDQGHTVAMVGDGINDGPALACADLGLAMGRGTDVA 664          
BLAST of FC868756 vs. ExPASy Swiss-Prot
Match: CADA2_LISMO (Probable cadmium-transporting ATPase OS=Listeria monocytogenes GN=cadA PE=1 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 5.419e-29
Identity = 74/230 (32.17%), Postives = 131/230 (56.96%), Query Frame = 1
Query:   34 TKMDRGEFLTLVASAEASSEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQVLVGNRKLLNES-GITIPDHVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGV-RPVMVTGDNWRTAHAVAREIGIQDVMADVMPAGKADAVRSFQKDGSIVAMVGDGINDSPALAAADVGMAI-GAGTDIA 714
            T +   +   ++A+ E  S+HPLA A+++Y               G++   + T     ++V+DF+++ G+GI+  + G    VG+  L  E       D +   V +L+   +T +L   +  LI ++ +AD V+  +  V++ L ++G+ + +M+TGDN  TA A+ +++G+ ++  ++MP  K D ++  + +   VAMVGDGIND+PALAAA VG+A+ GAGTD A
Sbjct:  420 TNIQHNKNYIIMAALEQLSQHPLASAIIKY---------------GETREMDLTS----INVNDFTSITGKGIRGTVDGNTYYVGSPVLFKELLASQFTDSIHRQVSDLQLKGKTAMLFGTNQKLISIVAVADEVRSSSQHVIKRLHELGIEKTIMLTGDNQATAQAIGQQVGVSEIEGELMPQDKLDYIKQLKINFGKVAMVGDGINDAPALAAATVGIAMGGAGTDTA 630          
BLAST of FC868756 vs. ExPASy Swiss-Prot
Match: CADA1_LISMO (Probable cadmium-transporting ATPase OS=Listeria monocytogenes GN=cadA PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 7.077e-29
Identity = 76/241 (31.54%), Postives = 136/241 (56.43%), Query Frame = 1
Query:    1 GRATVTTAKVFTK-MDRGEFLTLVASAEASSEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQVLVGNRKLLNESGITIPDHVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGV-RPVMVTGDNWRTAHAVAREIGIQDVMADVMPAGKADAVRSFQKDGSIVAMVGDGINDSPALAAADVGMAI-GAGTDIA 714
            G+  VT    +++ MD    L+++ + E  S+HPLA A++  A      D    N D +S           +++ +FS++ G+G++  ++G    +G+ KL  ES +     +      L++  +T +L   + N++ ++ +AD V+  +  V+  L K+G+   +M+TGDN  TA  + +EIG+ D+ A++MP  K   ++  ++    VAM+GDG+ND+PALAA+ VG+A+ GAGTD A
Sbjct:  406 GKPVVTDFIPYSEHMDEQNSLSIITALETMSQHPLASAIISKA----MID----NVDYKS-----------IEIDNFSSITGKGVKGEVNGITYYIGSSKLF-ESSLEKSQSISQTYQSLQKQGKTAMLFGTESNILAIIAVADEVRESSKEVIAQLHKLGIAHTIMLTGDNNDTAQFIGKEIGVSDIKAELMPEDKLTYIKELKQTYGKVAMIGDGVNDAPALAASTVGIAMGGAGTDTA 626          
BLAST of FC868756 vs. ExPASy Swiss-Prot
Match: CTPA_MYCLE (Cation-transporting P-type ATPase A OS=Mycobacterium leprae GN=ctpA PE=3 SV=2)

HSP 1 Score: 125.946 bits (315), Expect = 2.059e-28
Identity = 83/241 (34.44%), Postives = 115/241 (47.72%), Query Frame = 1
Query:    1 GRATVTTAKVFTKMDRGEFLTLVASAEASSEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQVLVGNRKLLNESGITIPDHVESFVV---ELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREIGIQDVMADVMPAGKADAVRSFQKDGSIVAMVGDGINDSPALAAADVGMAIGAGTDIA 714
            G+  V+           E L + A+ E++SEH +A A+     H                            V++F A+PG G+   ++ + V VG       S I    +  + V      E    T + V  D    GV+ +AD VK  AA  V  L   G R  ++TGDN  +A AVA  IGI +V+AD++P  K D +   +  G +VAMVGDGIND PALA AD+GMAIG GTD+A
Sbjct:  438 GQLKVSAVTAAPGWQANEVLQMAATVESASEHAVALAIAASTTHRE-------------------------PVANFRAVPGHGVSGTVAERAVRVGK-----PSWIASRCNSTTLVTARRNAELRGETAVFVEIDGEQCGVIAVADAVKASAADAVAALHDRGFRTALLTGDNPASAAAVASRIGIDEVIADILPEDKVDVIEQLRDRGHVVAMVGDGINDGPALARADLGMAIGRGTDVA 648          
BLAST of FC868756 vs. ExPASy Swiss-Prot
Match: ATU2_SCHPO (Copper-transporting ATPase ccc2 OS=Schizosaccharomyces pombe GN=ccc2 PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.335e-27
Identity = 78/250 (31.20%), Postives = 126/250 (50.40%), Query Frame = 1
Query:    1 GRATVTTAKVFTKMD------RGEFLTLVASAEASSEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQ----VLVGNRKLLNESGITIPDHVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAR--EIGIQDVMADVMPAGKADAVRSFQKDGSIVAMVGDGINDSPALAAADVGMAIGAGTDIA 714
            G+ +VT   +   ++      +  F   V ++E+SSEHP+ KA+ E A  F    +                    + +  F+A+PG G+   +  K+     L+GN  LL  + ++IPD  +S +     S  T + +A D   +G +G  D V+ ++   V  L ++G +  ++TGD   TA  VA+  EI   DV A+ +P+ KA+ ++  +     VAMVGDGINDSP+L  ADVG+A   G+ IA
Sbjct:  537 GKLSVTDISIVDNLEELLDIPKNIFWAFVKASESSSEHPIGKAITEKASEFTDVSE--------------------IGIESFNAVPGEGVDVVLRWKERTFHALLGNSLLLEHNNVSIPDDFDSKLKLSSSSGLTCVRIAIDGQFVGFLGCMDQVRPDSYQTVSALKQLGKKVCLLTGDQKATARRVAQGLEIDFSDVYAEAVPSQKAEIIQKLKDQKHCVAMVGDGINDSPSLVLADVGIAPINGSGIA 766          
BLAST of FC868756 vs. ExPASy Swiss-Prot
Match: ATZN_ECOLI (Lead, cadmium, zinc and mercury-transporting ATPase OS=Escherichia coli (strain K12) GN=zntA PE=1 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.277e-27
Identity = 80/238 (33.61%), Postives = 128/238 (53.78%), Query Frame = 1
Query:    1 GRATVTTAKVFTKMDRGEFLTLVASAEASSEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQVLVGNRKLLNESGITIPDHVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREIGIQDVMADVMPAGKADAVRSFQKDGSIVAMVGDGINDSPALAAADVGMAIGAGTDIA 714
            G+  VT     T +   E LTL A+ E  + HPLA+A+V  A+           P  +S                  AL G GI+  ++G++VL+        +G    D     + ELE + +T +LV  +D+++GV+ + D ++ +AA  +  L  +GV+ V++TGDN R A A+A E+G+ +  A ++P  K  AV    +   + AMVGDGIND+PA+ AA +G+A+G+GTD+A
Sbjct:  444 GKPRVTAIHPATGISESELLTLAAAVEQGATHPLAQAIVREAQVAEL-----AIPTAESQR----------------ALVGSGIEAQVNGERVLIC------AAGKHPADAFTGLINELESAGQTVVLVVRNDDVLGVIALQDTLRADAATAISELNALGVKGVILTGDNPRAAAAIAGELGL-EFKAGLLPEDKVKAVTELNQHAPL-AMVGDGINDAPAMKAAAIGIAMGSGTDVA 652          
The following BLAST results are available for this feature:
BLAST of FC868756 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 258
Match NameE-valueIdentityDescription
CADA2_STAAU1.092e-2931.82Probable cadmium-transporting ATPase OS=Staphyloco... [more]
CADA1_STAAU1.092e-2930.99Probable cadmium-transporting ATPase OS=Staphyloco... [more]
CADA_BACPF1.426e-2931.69Probable cadmium-transporting ATPase OS=Bacillus p... [more]
ZOSA_BACSU2.432e-2931.93Zinc-transporting ATPase OS=Bacillus subtilis GN=z... [more]
CTPB_MYCLE5.419e-2935.00Cation-transporting P-type ATPase B OS=Mycobacteri... [more]
CADA2_LISMO5.419e-2932.17Probable cadmium-transporting ATPase OS=Listeria m... [more]
CADA1_LISMO7.077e-2931.54Probable cadmium-transporting ATPase OS=Listeria m... [more]
CTPA_MYCLE2.059e-2834.44Cation-transporting P-type ATPase A OS=Mycobacteri... [more]
ATU2_SCHPO1.335e-2731.20Copper-transporting ATPase ccc2 OS=Schizosaccharom... [more]
ATZN_ECOLI2.277e-2733.61Lead, cadmium, zinc and mercury-transporting ATPas... [more]

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Properties
Property NameValue
Genbank descriptionC31004D06EF AbioticL1 Citrus clementina cDNA clone C31004D06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868756 ID=FC868756; Name=FC868756; organism=Citrus clementina; type=EST; length=715bp
GGGAGAGCTACTGTTACAACTGCTAAGGTTTTCACGAAAATGGATCGTGG
TGAATTTCTTACATTGGTGGCTTCAGCAGAGGCTAGCAGTGAACATCCAT
TGGCCAAAGCAGTTGTGGAGTATGCACGTCATTTCCATTTCTTTGATGAT
CCCTCTTTGAACCCCGATGGCCAAAGCCACAGCAAAGAGTCCACTGGTTC
TGGATGGCTTCTTGATGTCTCGGATTTCTCTGCTCTGCCTGGAAGAGGTA
TCCAGTGCTTTATAAGTGGAAAACAGGTTTTGGTGGGTAACCGGAAGTTG
CTGAATGAAAGTGGAATCACCATTCCAGACCATGTAGAAAGTTTTGTTGT
GGAACTGGAGGAAAGTGCTAGGACGGGCATACTTGTTGCGTATGATGATA
ACTTGATCGGTGTTATGGGAATTGCTGACCCAGTTAAGAGGGAAGCTGCT
GTAGTTGTAGAGGGCCTTTTAAAAATGGGTGTGAGACCCGTCATGGTAAC
TGGAGATAATTGGAGGACAGCGCATGCTGTTGCTAGAGAGATCGGCATTC
AAGATGTGATGGCAGATGTAATGCCAGCAGGAAAAGCTGATGCCGTCCGC
TCATTTCAGAAAGACGGAAGCATAGTAGCTATGGTTGGGGATGGAATCAA
TGATTCTCCAGCTCTAGCTGCGGCTGATGTTGGTATGGCTATTGGGGCAG
GTACAGATATTGCCA
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