FC868756

Overview
NameFC868756
Unique NameFC868756
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length715
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868756 vs. ExPASy Swiss-Prot
Match: CTPG_MYCTU (Probable cation-transporting ATPase G OS=Mycobacterium tuberculosis GN=ctpG PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.476e-26
Identity = 83/224 (37.05%), Postives = 123/224 (54.91%), Query Frame = 1
Query:   46 RGEFLTLVASAEASSEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQVLVGNRKLLNESGITIPDHVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREIGIQDVMADVMPAGKADAVRSFQKDGSIVAMVGDGINDSPALAAADVGMAIGA-GTDIA 714
            R E L + A+ EA SEHPLA AV+                   + ++ +T +      SD  A+PG G+   + G+ V +G    L+ + +   DHV      ++++  T +LV  D  L+G + + D ++ EAA VV GL   G +  M+TGDN  TA A+A + GI+ V A++ P  KA  V    +     AMVGDG+ND+PALAAAD+G+A+GA GTD+A
Sbjct:  485 REEVLAVAAALEARSEHPLAVAVL-------------------AATQATTAA------SDVQAVPGAGLIGRLDGRVVRLGRPGWLDAAELA--DHVAC----MQQAGATAVLVERDQQLLGAIAVRDELRPEAAEVVAGLRTGGYQVTMLTGDNHATAAALAAQAGIEQVHAELRPEDKAHLVAQL-RARQPTAMVGDGVNDAPALAAADLGIAMGAMGTDVA 676          
BLAST of FC868756 vs. ExPASy Swiss-Prot
Match: CTPG_MYCBO (Probable cation-transporting ATPase G OS=Mycobacterium bovis GN=ctpG PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.476e-26
Identity = 83/224 (37.05%), Postives = 123/224 (54.91%), Query Frame = 1
Query:   46 RGEFLTLVASAEASSEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQVLVGNRKLLNESGITIPDHVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREIGIQDVMADVMPAGKADAVRSFQKDGSIVAMVGDGINDSPALAAADVGMAIGA-GTDIA 714
            R E L + A+ EA SEHPLA AV+                   + ++ +T +      SD  A+PG G+   + G+ V +G    L+ + +   DHV      ++++  T +LV  D  L+G + + D ++ EAA VV GL   G +  M+TGDN  TA A+A + GI+ V A++ P  KA  V    +     AMVGDG+ND+PALAAAD+G+A+GA GTD+A
Sbjct:  485 REEVLAVAAALEARSEHPLAVAVL-------------------AATQATTAA------SDVQAVPGAGLIGRLDGRVVRLGRPGWLDAAELA--DHVAC----MQQAGATAVLVERDQQLLGAIAVRDELRPEAAEVVAGLRTGGYQVTMLTGDNHATAAALAAQAGIEQVHAELRPEDKAHLVAQL-RARQPTAMVGDGVNDAPALAAADLGIAMGAMGTDVA 676          
BLAST of FC868756 vs. ExPASy Swiss-Prot
Match: COPB_ENTHR (Copper-exporting P-type ATPase B OS=Enterococcus hirae GN=copB PE=1 SV=2)

HSP 1 Score: 117.472 bits (293), Expect = 7.324e-26
Identity = 75/240 (31.25%), Postives = 118/240 (49.17%), Query Frame = 1
Query:    1 GRATVTTAKVFTKM-DRGEFLTLVASAEASSEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQVLVGNRKLLNESGITI-PDHVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREIGIQDVMADVMPAGKADAVRSFQKDGSIVAMVGDGINDSPALAAADVGMAIGAGTDIA 714
            G+ TVT  ++  +     E L  + + EA + HPLA  ++ Y +      +  + P      K                L G G++  +  K V + N K     G+ I P+ ++++    E    T   +   D L+ V+ + D +K EA   ++ + +  + PVM+TGDN + A AVA  +GI +    ++P  K   V+ +   G  V MVGDGIND+P+LA A +GMAIGAGTDIA
Sbjct:  448 GKFTVTGIEILDEAYQEEEILKYIGALEAHANHPLAIGIMNYLK------EKKITPYQAQEQKN---------------LAGVGLEATVEDKDVKIINEKEAKRLGLKIDPERLKNY----EAQGNTVSFLVVSDKLVAVIALGDVIKPEAKEFIQAIKEKNIIPVMLTGDNPKAAQAVAEYLGINEYYGGLLPDDKEAIVQRYLDQGKKVIMVGDGINDAPSLARATIGMAIGAGTDIA 662          
BLAST of FC868756 vs. ExPASy Swiss-Prot
Match: CTPD_MYCTU (Probable cation-transporting P-type ATPase D OS=Mycobacterium tuberculosis GN=ctpD PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 6.200e-25
Identity = 74/225 (32.89%), Postives = 111/225 (49.33%), Query Frame = 1
Query:   40 MDRGEFLTLVASAEASSEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQVLVGNRKLLNESGITIPDHVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKM-GVRPVMVTGDNWRTAHAVAREIGIQDVMADVMPAGKADAVRSFQKDGSIVAMVGDGINDSPALAAADVGMAIGAGTDI 711
            +D    L L A+AE SSEHPL +A+V  AR       P+                      DF A+PG G+   +    V + + +    + +       + +  L  +  T  +V  D   IGV+G+ D ++ +A   V  +  +    PV++TGDN R A  VAR  GI DV A ++P  K + VR+ Q  G  V +VGDG+ND+PA+AAA   +A+GAG D+
Sbjct:  370 VDARRLLQLAAAAEQSSEHPLGRAIVAEARRRGIAIPPA---------------------KDFRAVPGCGVHALVGNDFVEIASPQSYRGAPL-------AELAPLLSAGATAAIVLLDGVAIGVLGLTDQLRPDAVESVAAMAALTAAPPVLLTGDNGRAAWRVARNAGITDVRAALLPEQKVEVVRNLQAGGHQVLLVGDGVNDAPAMAAARAAVAMGAGADL 566          
BLAST of FC868756 vs. ExPASy Swiss-Prot
Match: CTPD_MYCBO (Probable cation-transporting P-type ATPase D OS=Mycobacterium bovis GN=ctpD PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 6.200e-25
Identity = 74/225 (32.89%), Postives = 111/225 (49.33%), Query Frame = 1
Query:   40 MDRGEFLTLVASAEASSEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQVLVGNRKLLNESGITIPDHVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKM-GVRPVMVTGDNWRTAHAVAREIGIQDVMADVMPAGKADAVRSFQKDGSIVAMVGDGINDSPALAAADVGMAIGAGTDI 711
            +D    L L A+AE SSEHPL +A+V  AR       P+                      DF A+PG G+   +    V + + +    + +       + +  L  +  T  +V  D   IGV+G+ D ++ +A   V  +  +    PV++TGDN R A  VAR  GI DV A ++P  K + VR+ Q  G  V +VGDG+ND+PA+AAA   +A+GAG D+
Sbjct:  370 VDARRLLQLAAAAEQSSEHPLGRAIVAEARRRGIAIPPA---------------------KDFRAVPGCGVHALVGNDFVEIASPQSYRGAPL-------AELAPLLSAGATAAIVLLDGVAIGVLGLTDQLRPDAVESVAAMAALTAAPPVLLTGDNGRAAWRVARNAGITDVRAALLPEQKVEVVRNLQAGGHQVLLVGDGVNDAPAMAAARAAVAMGAGADL 566          
BLAST of FC868756 vs. ExPASy Swiss-Prot
Match: ATKB_CLOP1 (Potassium-transporting ATPase B chain OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=kdpB PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 8.097e-25
Identity = 58/141 (41.13%), Postives = 84/141 (59.57%), Query Frame = 1
Query:  292 RKLLNESGITIPDHVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREIGIQDVMADVMPAGKADAVRSFQKDGSIVAMVGDGINDSPALAAADVGMAIGAGTDIA 714
            +K + E G    D  E  V E+     T ++VA +  ++G++ + D VKR        L KMG++ +M+TGDN  TA A+A E G+ D +A+  P GK + ++ FQK G +VAM GDG ND+PALA ADV +A+  GT  A
Sbjct:  408 KKYITEHGGDFSDECEKKVEEIARKGGTPLVVAKNYKVLGIIYLKDIVKRGVKEKFSDLRKMGIKTIMITGDNPLTAAAIAAEAGVDDFLAEATPEGKLNMIKDFQKKGHLVAMTGDGTNDAPALAQADVAVAMNTGTQAA 548          
BLAST of FC868756 vs. ExPASy Swiss-Prot
Match: ATU2_YEAST (Copper-transporting ATPase OS=Saccharomyces cerevisiae GN=CCC2 PE=1 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.058e-24
Identity = 79/233 (33.91%), Postives = 125/233 (53.65%), Query Frame = 1
Query:   40 MDRGEFLTLVASAEASSEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGI--QCFISGK--QVLVGNRKLLNESGITIPDHVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREIGI--QDVMADVMPAGKADAVRSFQ-KDGSI-VAMVGDGINDSPALAAADVGMAIGAGTDIA 714
            +D  E L  + + E+ S+HP++KA++ Y              DG + +K          V +   + G+GI  +C ++G    + +GN  L+ E  +     + S V    +   T   V+ + ++ G+  I D VK ++   V+ L + G    M+TGDN   A  VARE+GI  ++V +DV P GK D V+  Q K+G+  VA+VGDGIND+PALA +D+G+AI  GT+IA
Sbjct:  652 VDEDEVLACIKATESISDHPVSKAIIRYC-------------DGLNCNKALNAV-----VLESEYVLGKGIVSKCQVNGNTYDICIGNEALILEDALKKSGFINSNV----DQGNTVSYVSVNGHVFGLFEINDEVKHDSYATVQYLQRNGYETYMITGDNNSAAKRVAREVGISFENVYSDVSPTGKCDLVKKIQDKEGNNKVAVVGDGINDAPALALSDLGIAISTGTEIA 862          
BLAST of FC868756 vs. ExPASy Swiss-Prot
Match: AHM3_ARATH (Putative cadmium/zinc-transporting ATPase 3 OS=Arabidopsis thaliana GN=HMA2 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.248e-24
Identity = 66/216 (30.56%), Postives = 117/216 (54.17%), Query Frame = 1
Query:   67 VASAEASSEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQVLVGNRKLLNESG-ITIPDHVESFVVELEESARTGILVAY---DDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREIG--IQDVMADVMPAGKADAVRSFQKDGSIVAMVGDGINDSPALAAADVGMAIG 696
            V+S E+ S HP+A AVV+YAR        S+ P  ++             V D+   PG GI   I GK+V +GN+++ + +G +++PD        ++   + G  + Y    + L GV  ++D  +   A  ++ L  +G++  M+TGDN   A     ++G  +  V A+++P  K++ ++  +++    AMVGDG+ND+PALA AD+G+++G
Sbjct:  422 VSSTESKSSHPMAAAVVDYARSV------SVEPKPEA-------------VEDYQNFPGEGIYGKIDGKEVYIGNKRIASRAGCLSVPD--------IDVDTKGGKTIGYVYVGETLAGVFNLSDACRSGVAQAMKELKSLGIKIAMLTGDNHAAAMHAQEQLGNAMDIVRAELLPEDKSEIIKQLKREEGPTAMVGDGLNDAPALATADIGISMG 610          
BLAST of FC868756 vs. ExPASy Swiss-Prot
Match: COPA_HELFE (Copper-transporting ATPase OS=Helicobacter felis GN=copA PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.855e-24
Identity = 71/236 (30.08%), Postives = 116/236 (49.15%), Query Frame = 1
Query:    1 GRATVTTAKVFTKMDRGEFLTLVASAEASSEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQVLVGNRKLLNESGITIPDHVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREIGIQDVMADVMPAGKADAVRSFQKDGSIVAMVGDGINDSPALAAADVGMAIGAGTD 708
            G   V   +V   +DR E LTL AS EA SEH +AK +V                   +H+KE   +  L +V +  A PG GI+  +  + +  GN +  N     +P+   +            + V  +  ++GV+ +AD +K  +   +  L  +GV+  +++GDN     A+A ++GIQD  A   P  K   ++  +  G +V MVGDG+ND+P+LA +DVG+ +  G+D
Sbjct:  429 GTPLVQEVRVAEGVDRLELLTLCASLEAQSEHVIAKGIV-------------------AHAKEQGIA--LQEVQEVQAKPGFGIKGVVGDQIIKAGNLEFFN-----LPNPFGTL-------EGIQVFVGTETQILGVVVLADSLKEGSKEAISELKALGVKTTLLSGDNLENVRALATQLGIQDYHAQAKPEDKLKVIQELKAQGKVVMMVGDGVNDAPSLALSDVGVVMAKGSD 631          
BLAST of FC868756 vs. ExPASy Swiss-Prot
Match: ATKB2_ANASP (Potassium-transporting ATPase B chain 2 OS=Anabaena sp. (strain PCC 7120) GN=kdpB2 PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 8.953e-24
Identity = 74/218 (33.94%), Postives = 111/218 (50.92%), Query Frame = 1
Query:   76 AEASSEHPLAKAVVEYARHFHFFDDPSLNP-DGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQVLVGN----RKLLNESGITIPDHVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREIGIQDVMADVMPAGKADAVRSFQKDGSIVAMVGDGINDSPALAAADVGMAIGAGTDIA 714
            A    E P  K++V+ A  +    D +LN  +G   S ++  SG        + LP        +GKQV  G     +  +   G +IP  V+     +     T + V  D+ + GV+ + D VK       E L +MGV+ +M+TGDN  TA  +A+E G+ D +A+  P  K D +R+ Q  G +VAM GDG ND+PALA A+VG+A+ +GT  A
Sbjct:  372 ASLFDETPEGKSIVKLAEKYKILADVNLNQAEGVEFSAKTRMSG--------TNLP--------NGKQVRKGAVDAIKGFIRSRGGSIPSDVDVAYERVSLLGGTPLAVCQDNEIFGVIYLKDIVKSGLRERFEQLRRMGVKTIMLTGDNHITASVIAQEAGVDDFIAEATPEDKIDVIRNEQSQGKLVAMTGDGTNDAPALAQANVGLAMNSGTQAA 573          
The following BLAST results are available for this feature:
BLAST of FC868756 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 258
Match NameE-valueIdentityDescription
CTPG_MYCTU1.476e-2637.05Probable cation-transporting ATPase G OS=Mycobacte... [more]
CTPG_MYCBO1.476e-2637.05Probable cation-transporting ATPase G OS=Mycobacte... [more]
COPB_ENTHR7.324e-2631.25Copper-exporting P-type ATPase B OS=Enterococcus h... [more]
CTPD_MYCTU6.200e-2532.89Probable cation-transporting P-type ATPase D OS=My... [more]
CTPD_MYCBO6.200e-2532.89Probable cation-transporting P-type ATPase D OS=My... [more]
ATKB_CLOP18.097e-2541.13Potassium-transporting ATPase B chain OS=Clostridi... [more]
ATU2_YEAST1.058e-2433.91Copper-transporting ATPase OS=Saccharomyces cerevi... [more]
AHM3_ARATH5.248e-2430.56Putative cadmium/zinc-transporting ATPase 3 OS=Ara... [more]
COPA_HELFE6.855e-2430.08Copper-transporting ATPase OS=Helicobacter felis G... [more]
ATKB2_ANASP8.953e-2433.94Potassium-transporting ATPase B chain 2 OS=Anabaen... [more]

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Properties
Property NameValue
Genbank descriptionC31004D06EF AbioticL1 Citrus clementina cDNA clone C31004D06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868756 ID=FC868756; Name=FC868756; organism=Citrus clementina; type=EST; length=715bp
GGGAGAGCTACTGTTACAACTGCTAAGGTTTTCACGAAAATGGATCGTGG
TGAATTTCTTACATTGGTGGCTTCAGCAGAGGCTAGCAGTGAACATCCAT
TGGCCAAAGCAGTTGTGGAGTATGCACGTCATTTCCATTTCTTTGATGAT
CCCTCTTTGAACCCCGATGGCCAAAGCCACAGCAAAGAGTCCACTGGTTC
TGGATGGCTTCTTGATGTCTCGGATTTCTCTGCTCTGCCTGGAAGAGGTA
TCCAGTGCTTTATAAGTGGAAAACAGGTTTTGGTGGGTAACCGGAAGTTG
CTGAATGAAAGTGGAATCACCATTCCAGACCATGTAGAAAGTTTTGTTGT
GGAACTGGAGGAAAGTGCTAGGACGGGCATACTTGTTGCGTATGATGATA
ACTTGATCGGTGTTATGGGAATTGCTGACCCAGTTAAGAGGGAAGCTGCT
GTAGTTGTAGAGGGCCTTTTAAAAATGGGTGTGAGACCCGTCATGGTAAC
TGGAGATAATTGGAGGACAGCGCATGCTGTTGCTAGAGAGATCGGCATTC
AAGATGTGATGGCAGATGTAATGCCAGCAGGAAAAGCTGATGCCGTCCGC
TCATTTCAGAAAGACGGAAGCATAGTAGCTATGGTTGGGGATGGAATCAA
TGATTCTCCAGCTCTAGCTGCGGCTGATGTTGGTATGGCTATTGGGGCAG
GTACAGATATTGCCA
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