FC868756

Overview
NameFC868756
Unique NameFC868756
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length715
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868756 vs. ExPASy Swiss-Prot
Match: AHM2_ARATH (Putative cadmium/zinc-transporting ATPase 2 OS=Arabidopsis thaliana GN=HMA4 PE=2 SV=2)

HSP 1 Score: 107.071 bits (266), Expect = 9.898e-23
Identity = 65/215 (30.23%), Postives = 107/215 (49.77%), Query Frame = 1
Query:   67 VASAEASSEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQVLVGNRKLLNESGITIPDHVESFVVELEESARTGILVAY---DDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREIG--IQDVMADVMPAGKADAVRSFQKDGSIVAMVGDGINDSPALAAADVGMAIG 696
            V+S E+ S HP+A  +V+YA+       P                    +V D+   PG GI   I G  + +GN+K+ + +G        S V E+E   + G  V Y    + L G   ++D  +   +  +  L  +G++  M+TGDN   A     ++G  +  V  D++P  K+  ++ F+K+G   AMVGDG+ND+PALA AD+G+++G
Sbjct:  432 VSSVESKSSHPMAATIVDYAKSVSVEPRPE-------------------EVEDYQNFPGEGIYGKIDGNDIFIGNKKIASRAGC-------STVPEIEVDTKGGKTVGYVYVGERLAGFFNLSDACRSGVSQAMAELKSLGIKTAMLTGDNQAAAMHAQEQLGNVLDVVHGDLLPEDKSRIIQEFKKEGP-TAMVGDGVNDAPALATADIGISMG 619          
BLAST of FC868756 vs. ExPASy Swiss-Prot
Match: ATKB_PSEAE (Potassium-transporting ATPase B chain OS=Pseudomonas aeruginosa GN=kdpB PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.293e-22
Identity = 72/216 (33.33%), Postives = 106/216 (49.07%), Query Frame = 1
Query:   76 AEASSEHPLAKAVVEYARHFHFFDDP---SLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQVLVGNRKLLNESGITIPDHVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREIGIQDVMADVMPAGKADAVRSFQKDGSIVAMVGDGINDSPALAAADVGMAIGAGTDIA 714
            A  + + P  K++VEY R  H  ++P    L P   S     +G  W   V    A+                   + ++     +P+ +   V ++ +S  T +LV  +  L+G + + D VK         L ++G+R VMVTGDN  TA A+A E G+ DV+A+  P  K   +R  Q +G +VAM GDG ND+PALA ADVGMA+  GT  A
Sbjct:  350 ASLADDTPEGKSIVEYLRILHPIEEPRREELTPIAFSAETRLSGVDWNGQVYRKGAVDAA---------------LRFIDLPREKMPEVLSREVDKIAQSGGTPLLVVANGRLLGAIHLKDVVKPGIRERFAELRRLGIRTVMVTGDNPLTAAAIAAEAGVDDVIAEATPEKKLARIRQEQGEGRLVAMCGDGANDAPALAQADVGMAMNDGTQAA 550          
BLAST of FC868756 vs. ExPASy Swiss-Prot
Match: ATKB_LISMO (Potassium-transporting ATPase B chain OS=Listeria monocytogenes GN=kdpB PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.293e-22
Identity = 53/141 (37.59%), Postives = 85/141 (60.28%), Query Frame = 1
Query:  292 RKLLNESGITIPDHVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREIGIQDVMADVMPAGKADAVRSFQKDGSIVAMVGDGINDSPALAAADVGMAIGAGTDIA 714
            R  +  +G T P   ++ V ++  +  T ++V  ++ ++GV+ + D VK         L KMG++ +M+TGDN  TA A+A E G+ D +A+  P  K + +R +Q++G +VAM GDG ND+PALA ADV +A+  GT  A
Sbjct:  401 RAYVTANGGTYPKECDAIVSKVAGAGGTPLVVVRNNQVLGVIYLKDIVKNGVKERFLDLRKMGIKTIMITGDNPMTAAAIAAEAGVDDFLAEATPEAKLELIREYQREGHLVAMTGDGTNDAPALAQADVAVAMNTGTQAA 541          
BLAST of FC868756 vs. ExPASy Swiss-Prot
Match: ATKB_LISMH (Potassium-transporting ATPase B chain OS=Listeria monocytogenes serotype 4a (strain HCC23) GN=kdpB PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.293e-22
Identity = 53/141 (37.59%), Postives = 85/141 (60.28%), Query Frame = 1
Query:  292 RKLLNESGITIPDHVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREIGIQDVMADVMPAGKADAVRSFQKDGSIVAMVGDGINDSPALAAADVGMAIGAGTDIA 714
            R  +  +G T P   ++ V ++  +  T ++V  ++ ++GV+ + D VK         L KMG++ +M+TGDN  TA A+A E G+ D +A+  P  K + +R +Q++G +VAM GDG ND+PALA ADV +A+  GT  A
Sbjct:  401 RAYVTANGGTYPKECDAIVSKVAGAGGTPLVVVRNNKVLGVIYLKDIVKNGVKERFLDLRKMGIKTIMITGDNPMTAAAIAAEAGVDDFLAEATPEAKLELIREYQREGHLVAMTGDGTNDAPALAQADVAVAMNTGTQAA 541          
BLAST of FC868756 vs. ExPASy Swiss-Prot
Match: ATKB_LISMF (Potassium-transporting ATPase B chain OS=Listeria monocytogenes serotype 4b (strain F2365) GN=kdpB PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.293e-22
Identity = 53/141 (37.59%), Postives = 85/141 (60.28%), Query Frame = 1
Query:  292 RKLLNESGITIPDHVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREIGIQDVMADVMPAGKADAVRSFQKDGSIVAMVGDGINDSPALAAADVGMAIGAGTDIA 714
            R  +  +G T P   ++ V ++  +  T ++V  ++ ++GV+ + D VK         L KMG++ +M+TGDN  TA A+A E G+ D +A+  P  K + +R +Q++G +VAM GDG ND+PALA ADV +A+  GT  A
Sbjct:  401 RAYVTANGGTYPKECDAIVSKVAGAGGTPLVVVRNNKVLGVIYLKDIVKNGVKERFLDLRKMGIKTIMITGDNPMTAAAIAAEAGVDDFLAEATPEAKLELIREYQREGHLVAMTGDGTNDAPALAQADVAVAMNTGTQAA 541          
BLAST of FC868756 vs. ExPASy Swiss-Prot
Match: ATKB_LISMC (Potassium-transporting ATPase B chain OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=kdpB PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.293e-22
Identity = 53/141 (37.59%), Postives = 85/141 (60.28%), Query Frame = 1
Query:  292 RKLLNESGITIPDHVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREIGIQDVMADVMPAGKADAVRSFQKDGSIVAMVGDGINDSPALAAADVGMAIGAGTDIA 714
            R  +  +G T P   ++ V ++  +  T ++V  ++ ++GV+ + D VK         L KMG++ +M+TGDN  TA A+A E G+ D +A+  P  K + +R +Q++G +VAM GDG ND+PALA ADV +A+  GT  A
Sbjct:  401 RAYVTANGGTYPKECDAIVSKVAGAGGTPLVVVRNNKVLGVIYLKDIVKNGVKERFLDLRKMGIKTIMITGDNPMTAAAIAAEAGVDDFLAEATPEAKLELIREYQREGHLVAMTGDGTNDAPALAQADVAVAMNTGTQAA 541          
BLAST of FC868756 vs. ExPASy Swiss-Prot
Match: ATKB_KLEP7 (Potassium-transporting ATPase B chain OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=kdpB PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.688e-22
Identity = 55/141 (39.01%), Postives = 83/141 (58.87%), Query Frame = 1
Query:  292 RKLLNESGITIPDHVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREIGIQDVMADVMPAGKADAVRSFQKDGSIVAMVGDGINDSPALAAADVGMAIGAGTDIA 714
            R+ +  +G   P  V+  V E+     T ++VA  + ++G++ + D VK         L KMG++ VM+TGDN  TA A+A E G+ D +A+  P  K   +R +Q +G +VAM GDG ND+PALA ADV +A+ +GT  A
Sbjct:  402 RRHVEANGGHFPADVDKQVEEVARQGATPLVVAEGEKVLGIIALKDIVKGGIKERFAQLRKMGIKTVMITGDNRLTAAAIAAEAGVDDFLAEATPEAKLALIRQYQSEGRLVAMTGDGTNDAPALAQADVAVAMNSGTQAA 542          
BLAST of FC868756 vs. ExPASy Swiss-Prot
Match: ATKB_KLEP3 (Potassium-transporting ATPase B chain OS=Klebsiella pneumoniae (strain 342) GN=kdpB PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.688e-22
Identity = 55/141 (39.01%), Postives = 83/141 (58.87%), Query Frame = 1
Query:  292 RKLLNESGITIPDHVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREIGIQDVMADVMPAGKADAVRSFQKDGSIVAMVGDGINDSPALAAADVGMAIGAGTDIA 714
            R+ +  +G   P  V+  V E+     T ++VA  + ++G++ + D VK         L KMG++ VM+TGDN  TA A+A E G+ D +A+  P  K   +R +Q +G +VAM GDG ND+PALA ADV +A+ +GT  A
Sbjct:  402 RRHVEANGGHFPADVDKQVEEVARQGATPLVVAEGEKVLGIISLKDIVKGGIKERFAQLRKMGIKTVMITGDNRLTAAAIAAEAGVDDFLAEATPEAKLALIRQYQSEGRLVAMTGDGTNDAPALAQADVAVAMNSGTQAA 542          
BLAST of FC868756 vs. ExPASy Swiss-Prot
Match: ATKB_CLOBA (Potassium-transporting ATPase B chain OS=Clostridium botulinum (strain Alaska E43 / Type E3) GN=kdpB PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.688e-22
Identity = 52/126 (41.27%), Postives = 77/126 (61.11%), Query Frame = 1
Query:  337 ESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREIGIQDVMADVMPAGKADAVRSFQKDGSIVAMVGDGINDSPALAAADVGMAIGAGTDIA 714
            +  V  +     T ++VA D+ ++GV+ + D +K+        L KMG++ +M+TGDN  TA A+A E G+ D +A+  P GK + +R FQ  G +VAM GDG ND+PALA ADV +A+  GT  A
Sbjct:  423 DEVVARISNKGGTPLVVAKDNKVLGVVYLKDIIKQGVQEKFADLRKMGIKTIMITGDNPLTAAAIAAEAGVDDFLAEATPEGKLEMIRDFQIKGHLVAMTGDGTNDAPALAQADVAVAMNTGTQAA 548          
BLAST of FC868756 vs. ExPASy Swiss-Prot
Match: ATKB_ERWT9 (Potassium-transporting ATPase B chain OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=kdpB PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.205e-22
Identity = 66/213 (30.99%), Postives = 107/213 (50.23%), Query Frame = 1
Query:   76 AEASSEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQVLVGNRKLLNESGITIPDHVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREIGIQDVMADVMPAGKADAVRSFQKDGSIVAMVGDGINDSPALAAADVGMAIGAGTDIA 714
            A  + E P  +++V  A+      +  LN  G +           +  S  + + G  +Q     K      R+ ++ +G   P  V S V  +  +  T ++V+  + ++GV+ + D VK         L KMG++ VM+TGDN  TA A+A E G+ D +++  P  K   +R +Q +G +VAM GDG ND+PALA ADV +A+ +GT  A
Sbjct:  340 ASLADETPEGRSIVVLAKQKFNLRERDLNSMGAT----------FIPFSAQTRMSGVNVQQRAIRKGAADAVRRYIDSNGGQFPGEVNSLVDRVARAGGTPLVVSDGNRVMGVVALKDIVKGGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDDFLSEATPEAKLALIRQYQAEGRLVAMTGDGTNDAPALAQADVAVAMNSGTQAA 542          
The following BLAST results are available for this feature:
BLAST of FC868756 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 258
Match NameE-valueIdentityDescription
AHM2_ARATH9.898e-2330.23Putative cadmium/zinc-transporting ATPase 2 OS=Ara... [more]
ATKB_PSEAE1.293e-2233.33Potassium-transporting ATPase B chain OS=Pseudomon... [more]
ATKB_LISMO1.293e-2237.59Potassium-transporting ATPase B chain OS=Listeria ... [more]
ATKB_LISMH1.293e-2237.59Potassium-transporting ATPase B chain OS=Listeria ... [more]
ATKB_LISMF1.293e-2237.59Potassium-transporting ATPase B chain OS=Listeria ... [more]
ATKB_LISMC1.293e-2237.59Potassium-transporting ATPase B chain OS=Listeria ... [more]
ATKB_KLEP71.688e-2239.01Potassium-transporting ATPase B chain OS=Klebsiell... [more]
ATKB_KLEP31.688e-2239.01Potassium-transporting ATPase B chain OS=Klebsiell... [more]
ATKB_CLOBA1.688e-2241.27Potassium-transporting ATPase B chain OS=Clostridi... [more]
ATKB_ERWT92.205e-2230.99Potassium-transporting ATPase B chain OS=Erwinia t... [more]

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Properties
Property NameValue
Genbank descriptionC31004D06EF AbioticL1 Citrus clementina cDNA clone C31004D06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868756 ID=FC868756; Name=FC868756; organism=Citrus clementina; type=EST; length=715bp
GGGAGAGCTACTGTTACAACTGCTAAGGTTTTCACGAAAATGGATCGTGG
TGAATTTCTTACATTGGTGGCTTCAGCAGAGGCTAGCAGTGAACATCCAT
TGGCCAAAGCAGTTGTGGAGTATGCACGTCATTTCCATTTCTTTGATGAT
CCCTCTTTGAACCCCGATGGCCAAAGCCACAGCAAAGAGTCCACTGGTTC
TGGATGGCTTCTTGATGTCTCGGATTTCTCTGCTCTGCCTGGAAGAGGTA
TCCAGTGCTTTATAAGTGGAAAACAGGTTTTGGTGGGTAACCGGAAGTTG
CTGAATGAAAGTGGAATCACCATTCCAGACCATGTAGAAAGTTTTGTTGT
GGAACTGGAGGAAAGTGCTAGGACGGGCATACTTGTTGCGTATGATGATA
ACTTGATCGGTGTTATGGGAATTGCTGACCCAGTTAAGAGGGAAGCTGCT
GTAGTTGTAGAGGGCCTTTTAAAAATGGGTGTGAGACCCGTCATGGTAAC
TGGAGATAATTGGAGGACAGCGCATGCTGTTGCTAGAGAGATCGGCATTC
AAGATGTGATGGCAGATGTAATGCCAGCAGGAAAAGCTGATGCCGTCCGC
TCATTTCAGAAAGACGGAAGCATAGTAGCTATGGTTGGGGATGGAATCAA
TGATTCTCCAGCTCTAGCTGCGGCTGATGTTGGTATGGCTATTGGGGCAG
GTACAGATATTGCCA
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