FC868797
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYM_BOVIN (Serine hydroxymethyltransferase, mitochondrial OS=Bos taurus GN=SHMT2 PE=2 SV=1) HSP 1 Score: 223.402 bits (568), Expect = 9.133e-58 Identity = 104/156 (66.67%), Postives = 124/156 (79.49%), Query Frame = 1 Query: 229 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 696 DPE+ +++ EK RQ +GLELI SENF S + ++A+GS + NKYSEGYPG RYYGG E +D E LCQ+RALEAF LDP +WGVNVQ SGSP+N YTALL+PHDRIM LDLP GGHL+HGY +D K+ISA SIFFE+MPY+LN TG IDYDQ Sbjct: 53 DPEMWELLRREKDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAAYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPQTGLIDYDQ 208
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYC_BOVIN (Serine hydroxymethyltransferase, cytosolic OS=Bos taurus GN=SHMT1 PE=2 SV=3) HSP 1 Score: 222.246 bits (565), Expect = 2.035e-57 Identity = 107/166 (64.46%), Postives = 129/166 (77.71%), Query Frame = 1 Query: 199 KQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 696 K L PL+ D E+ +II+ E RQ GLELI SENF S +V++A+GS + NKYSEGYPG RYYGG E+ID E LCQKRAL+ + LD + WGVNVQ SGSP+NF VYTAL++PH RIM LDLP GGHL+HG+ TD KKISA SIFFE+MPY++N TGYI+YDQ Sbjct: 20 KMLAQPLKDNDVEVYNIIKKESNRQRVGLELIASENFASRAVLEALGSCLNNKYSEGYPGQRYYGGTEFIDELEVLCQKRALQVYGLDSQCWGVNVQPYSGSPANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMPYKVNPDTGYINYDQ 185
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYC_CANGA (Serine hydroxymethyltransferase, cytosolic OS=Candida glabrata GN=SHM2 PE=3 SV=1) HSP 1 Score: 221.476 bits (563), Expect = 3.470e-57 Identity = 103/165 (62.42%), Postives = 128/165 (77.58%), Query Frame = 1 Query: 199 KQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYD 693 K ++ L DPE+ II+ E RQ ++LI SENFT+ SV A+G+ + NKYSEGYPGARYYGGNE+ID E LCQ+RALEAF + P++WGVNVQ+LSGSP+N QVY AL+KPH+R+M L LP GGHLSHGY T+ +KISAVS +FE+ PYR+N TG IDYD Sbjct: 11 KMVSGHLSETDPEVEQIIKDEVDRQKHSIDLIASENFTTTSVFDALGTPLCNKYSEGYPGARYYGGNEHIDRIERLCQQRALEAFHVTPDRWGVNVQTLSGSPANLQVYQALMKPHERLMGLYLPDGGHLSHGYATENRKISAVSTYFESFPYRVNPETGIIDYD 175
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYM_RABIT (Serine hydroxymethyltransferase, mitochondrial OS=Oryctolagus cuniculus GN=SHMT2 PE=1 SV=2) HSP 1 Score: 220.32 bits (560), Expect = 7.731e-57 Identity = 102/160 (63.75%), Postives = 125/160 (78.12%), Query Frame = 1 Query: 217 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 696 L DPE+ ++++ EK RQ +GLELI SENF + ++A+GS + NKYSEGYPG RYYGG E +D E LCQ+RALEAF LDP +WGVNVQ SGSP+N YTALL+PHDRIM LDLP GGHL+HGY +D K++SA SIFFE+MPY+LN TG IDY+Q Sbjct: 49 LSDTDPEMWELLQREKDRQCRGLELIASENFCIRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAAYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRVSATSIFFESMPYKLNPQTGLIDYEQ 208
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYC_YEAST (Serine hydroxymethyltransferase, cytosolic OS=Saccharomyces cerevisiae GN=SHM2 PE=1 SV=2) HSP 1 Score: 219.935 bits (559), Expect = 1.010e-56 Identity = 103/165 (62.42%), Postives = 129/165 (78.18%), Query Frame = 1 Query: 199 KQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYD 693 K + + L DPE+ II+ E RQ ++LI SENFTS SV A+G+ ++NKYSEGYPGARYYGGNE+ID E LCQ+RAL+AF + P+KWGVNVQ+LSGSP+N QVY A++KPH+R+M L LP GGHLSHGY T+ +KISAVS +FE+ PYR+N TG IDYD Sbjct: 11 KLITSHLVDTDPEVDSIIKDEIERQKHSIDLIASENFTSTSVFDALGTPLSNKYSEGYPGARYYGGNEHIDRMEILCQQRALKAFHVTPDKWGVNVQTLSGSPANLQVYQAIMKPHERLMGLYLPDGGHLSHGYATENRKISAVSTYFESFPYRVNPETGIIDYD 175
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYC_ASHGO (Serine hydroxymethyltransferase, cytosolic OS=Ashbya gossypii GN=SHM2 PE=3 SV=1) HSP 1 Score: 219.55 bits (558), Expect = 1.319e-56 Identity = 104/165 (63.03%), Postives = 129/165 (78.18%), Query Frame = 1 Query: 199 KQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYD 693 K +++ L DPE+ II+ E RQ + LI SEN TS +V A+G+ M NKYSEGYPGARYYGGN++ID E LCQ+RALEAF + P++WGVNVQSLSGSP+N QVY AL+KPH+R+M L LP GGHLSHGYQT+T+KISAVS +FE+ PYR++ TG IDYD Sbjct: 11 KLISSHLSESDPEVDAIIKDEIDRQKHSIVLIASENLTSTAVFDALGTPMCNKYSEGYPGARYYGGNQHIDRMELLCQRRALEAFHVTPDRWGVNVQSLSGSPANLQVYQALMKPHERLMGLHLPDGGHLSHGYQTETRKISAVSTYFESFPYRVDPETGIIDYD 175
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYM_ASHGO (Serine hydroxymethyltransferase, mitochondrial OS=Ashbya gossypii GN=SHM1 PE=3 SV=1) HSP 1 Score: 218.394 bits (555), Expect = 2.938e-56 Identity = 103/164 (62.80%), Postives = 130/164 (79.27%), Query Frame = 1 Query: 205 LNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDT-KKISAVSIFFETMPYRLNESTGYIDYD 693 L+ ++ DPE+ DI+ E++RQ + + LIPSENFTSV+VM +GS M NKYSEGYPG RYYGGN+YIDMAESLCQKRALE + LDP KWGVNVQSLSG+P+N Y+A+++ DR+M LDLPHGGHLSHGYQ KIS +S +F+TM YR++ +TG +DYD Sbjct: 36 LSQHVQEFDPEMYDILTKERSRQKRSITLIPSENFTSVAVMNLLGSEMQNKYSEGYPGQRYYGGNQYIDMAESLCQKRALELYGLDPAKWGVNVQSLSGAPANLYAYSAIMEVGDRMMGLDLPHGGHLSHGYQLQNGNKISYISKYFQTMAYRVDPATGLVDYD 199
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYC_NEUCR (Serine hydroxymethyltransferase, cytosolic OS=Neurospora crassa GN=for PE=3 SV=2) HSP 1 Score: 217.238 bits (552), Expect = 6.545e-56 Identity = 103/155 (66.45%), Postives = 124/155 (80.00%), Query Frame = 1 Query: 229 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYD 693 DP++A+I++ E RQ + + LI SEN TS +V A+GS M+NKYSEG PGARYYGGN++ID E LCQ RALEAF LDP++WGVNVQ LSGSP+N QVY A++ H R+M LDLPHGGHLSHGYQT +KISAVS +FETMPYR+N TG IDYD Sbjct: 22 DPQVAEIMKKEVQRQRESIILIASENVTSRAVFDALGSPMSNKYSEGLPGARYYGGNQHIDEIEVLCQNRALEAFHLDPKQWGVNVQCLSGSPANLQVYQAIMPVHGRLMGLDLPHGGHLSHGYQTPQRKISAVSTYFETMPYRVNIDTGLIDYD 176
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYM_KLULA (Serine hydroxymethyltransferase, mitochondrial OS=Kluyveromyces lactis GN=SHM1 PE=3 SV=1) HSP 1 Score: 214.157 bits (544), Expect = 5.541e-55 Identity = 100/157 (63.69%), Postives = 124/157 (78.98%), Query Frame = 1 Query: 226 VDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDT-KKISAVSIFFETMPYRLNESTGYIDYD 693 +DPE+ DI+ E+ RQ + LIPSENFTS SVM +GS M NKYSEGYPG RYYGGN++IDMAESLCQKRALE + LDP+ WGVNVQ LSG+P+N Y+A+++ +DR+M LDLPHGGHLSHGYQ + KIS +S +F+TMPY ++ TG IDYD Sbjct: 44 IDPEMYDILTKERKRQKHSITLIPSENFTSKSVMDLLGSEMQNKYSEGYPGERYYGGNQFIDMAESLCQKRALELYNLDPQLWGVNVQPLSGAPANLYAYSAVMETNDRLMGLDLPHGGHLSHGYQLPSGTKISYISKYFQTMPYHVDSQTGIIDYD 200
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYM_CANGA (Serine hydroxymethyltransferase, mitochondrial OS=Candida glabrata GN=SHM1 PE=3 SV=1) HSP 1 Score: 208.764 bits (530), Expect = 2.328e-53 Identity = 99/160 (61.88%), Postives = 124/160 (77.50%), Query Frame = 1 Query: 217 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDT-KKISAVSIFFETMPYRLNESTGYIDYD 693 ++ VDPE+ I+ E++RQ + LIPSENFTS +VM +GS M NKYSEGYPG RYYGGN++ID AESLCQ RAL+ + LDPEKWGVNVQ+LSG+P+N Y+A+++ DR+M LDLPHGGHLSHGYQ + KIS +S +F TMPY +N TG IDYD Sbjct: 27 VQEVDPEMFRILSDERSRQKHSVTLIPSENFTSKAVMDLLGSEMQNKYSEGYPGERYYGGNQFIDKAESLCQARALDLYGLDPEKWGVNVQALSGAPANLYAYSAVMEVGDRLMGLDLPHGGHLSHGYQLPSGTKISYISKYFNTMPYHVNTETGIIDYD 186 The following BLAST results are available for this feature:
BLAST of FC868797 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC868797 ID=FC868797; Name=FC868797; organism=Citrus clementina; type=EST; length=697bpback to top |