FC868797
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_ACIBL (Serine hydroxymethyltransferase OS=Acidobacteria bacterium (strain Ellin345) GN=glyA PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 6.369e-35 Identity = 77/165 (46.67%), Postives = 108/165 (65.45%), Query Frame = 1 Query: 202 QLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 696 +++ L DP+IA+ I +E+ RQ +GLELI SENF S +V+QA GSV TNKY+EGYPG RYYGG EY D+ E+L + RA E F + NVQ SGS +N + Y A+L+P D I+ L+L HGGHL+HG+ ++ ++ +PY + + T IDYD+ Sbjct: 4 RMSQSLNEEDPQIAEAIANEERRQHEGLELIASENFVSEAVLQAAGSVFTNKYAEGYPGKRYYGGCEYADVVENLARDRAKELFGAE----HANVQPHSGSSANMEAYGAILQPGDTILGLNLAHGGHLTHGH-----PLNFSGKTYKIVPYGVTKETETIDYDE 159
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_NITSB (Serine hydroxymethyltransferase OS=Nitratiruptor sp. (strain SB155-2) GN=glyA PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 8.318e-35 Identity = 80/156 (51.28%), Postives = 104/156 (66.67%), Query Frame = 1 Query: 229 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 696 DP + +I E E RQ LE+I SENFTS +VM+A+GSV TNKY+EGYPG RYYGG EY D E L +RA E F + VNVQ SGS +N VY ALLKP+D+I+ +DL HGGHL+HG K++A +++ Y +N+ G+IDYD+ Sbjct: 8 DPAVYEIFEKELQRQTDHLEMIASENFTSPAVMEAMGSVFTNKYAEGYPGKRYYGGCEYADAIEELAIQRAKELFGCE----FVNVQPHSGSQANQGVYLALLKPYDKILGMDLSHGGHLTHG-----AKVNASGKIYQSFFYGVNDE-GWIDYDR 153
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_GEOSL (Serine hydroxymethyltransferase OS=Geobacter sulfurreducens GN=glyA PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 8.318e-35 Identity = 76/160 (47.50%), Postives = 104/160 (65.00%), Query Frame = 1 Query: 217 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 696 LE DP++A+ I HE RQ LELI SENF S +V++A GSVMTNKY+EGYPG RYYGG ++D+ E+L +RA E F D NVQ SGS +N VY ++LKP D I+ ++L HGGHL+HG ++ FF +PY +++ T ID+++ Sbjct: 4 LETFDPQVAEAIRHETERQEYNLELIASENFVSEAVLEAQGSVMTNKYAEGYPGKRYYGGCHHVDVVENLAIERAKELFGAD----HANVQPHSGSQANMAVYFSVLKPGDTILGMNLSHGGHLTHG-----SPVNFSGRFFNVVPYGVSQETETIDFNE 154
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_DESAP (Serine hydroxymethyltransferase OS=Desulforudis audaxviator (strain MP104C) GN=glyA PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.086e-34 Identity = 82/163 (50.31%), Postives = 101/163 (61.96%), Query Frame = 1 Query: 208 NAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 696 N L DPEIA I E RQ LELI SENF S +V++A GSV+TNKY+EGYPGARYYGG EY+D+ ES+ +RA E F NVQ SG+ +N Y A L+P D IM + L HGGHL+HG KI+ +F +PY + E TG IDYD+ Sbjct: 4 NRSLAETDPEIARAIALEITRQGAKLELIASENFVSRAVLEAQGSVLTNKYAEGYPGARYYGGCEYVDIVESVAIRRAKEIFGAG----HANVQPHSGAQANMAAYFAFLEPGDTIMGMRLAHGGHLTHG-----AKINFSGRYFRYVPYGVEEETGRIDYDR 157
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_PELLD (Serine hydroxymethyltransferase OS=Pelodictyon luteolum (strain DSM 273) GN=glyA PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.853e-34 Identity = 80/160 (50.00%), Postives = 104/160 (65.00%), Query Frame = 1 Query: 217 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 696 L++ D E+ D I E RQ + LELI SENFTS +VMQA GSVMTNKY+EGYPG RYYGG E++D+AE L ++RA + F + VNVQ SGS +N V ++LKP DRIM LDL HGGHL+HG ++ F+ Y ++ TG ID ++ Sbjct: 6 LKMQDREVFDAIAGETVRQMETLELIASENFTSRAVMQACGSVMTNKYAEGYPGKRYYGGCEFVDIAEDLARERARKLFGCE----YVNVQPHSGSSANMAVLFSVLKPGDRIMGLDLSHGGHLTHG-----SSVNFSGQMFDARSYGVDRETGIIDMNK 156
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_GEOMG (Serine hydroxymethyltransferase OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=glyA PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.853e-34 Identity = 76/160 (47.50%), Postives = 103/160 (64.38%), Query Frame = 1 Query: 217 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 696 LE DP +A+ I HE RQ LELI SENF S +VM+A GSV+TNKY+EGYPG RYYGG ++D+ E+L +RA E F D NVQ SGS +N VY ++LKP D I+ ++L HGGHL+HG ++ FF +PY +++ T ID+++ Sbjct: 4 LETFDPAVAEAIRHETERQEYNLELIASENFVSEAVMEAQGSVLTNKYAEGYPGKRYYGGCHHVDVVENLAIERAKELFGAD----HANVQPHSGSQANMAVYFSVLKPGDTILGMNLSHGGHLTHG-----SPVNFSGRFFNVVPYGVSQETETIDFNE 154
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_SOLUE (Serine hydroxymethyltransferase OS=Solibacter usitatus (strain Ellin6076) GN=glyA PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 3.161e-34 Identity = 78/170 (45.88%), Postives = 109/170 (64.12%), Query Frame = 1 Query: 187 VTWPKQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 696 +T ++++ L VDPEI I+HE ARQ LELI SENFTS +V++A GSV TNKY+EGYPG RYYGG EY D+ E+L ++RA + F + VNVQ SGS +N Y A++ P D +M L+L HGGHL+HG+ ++ ++ +PY + + IDYD+ Sbjct: 1 MTESQRMSRTLAEVDPEIYQAIQHETARQDGQLELIASENFTSEAVLEATGSVFTNKYAEGYPGKRYYGGCEYTDVVENLARERASKLFGAE----YVNVQPHSGSQANQAAYGAVVSPGDTVMGLNLAHGGHLTHGH-----ALNFSGKTYKIVPYNVRKEDELIDYDE 161
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_BACTN (Serine hydroxymethyltransferase OS=Bacteroides thetaiotaomicron GN=glyA PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 3.161e-34 Identity = 79/156 (50.64%), Postives = 97/156 (62.18%), Query Frame = 1 Query: 229 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 696 D I DIIE E RQ KG+ELI SENF S VMQA+GS +TNKY+EGYPG RYYGG E +D +E + R E F + W NVQ SG+ +N V+ A+L P D+ M L+L HGGHLSHG +T I + Y LN+ TG +DYDQ Sbjct: 4 DDLIFDIIEKEHQRQLKGIELIASENFVSDQVMQAMGSCLTNKYAEGYPGKRYYGGCEVVDQSEQIAIDRLKEIFGAE---W-ANVQPHSGAQANAAVFLAVLNPGDKFMGLNLAHGGHLSHGSLVNTS-----GIIYTPCEYNLNQETGRVDYDQ 150
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_AQUAE (Serine hydroxymethyltransferase OS=Aquifex aeolicus GN=glyA PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 4.128e-34 Identity = 76/156 (48.72%), Postives = 100/156 (64.10%), Query Frame = 1 Query: 229 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 696 DPE+ D + E RQ+ LE+I SENFTS++VM+A GSV+TNKY+EG PG RYYGG EY+D+ E+L +RA + F + NVQ SGS +N VY A+L P D IM +DL HGGHL+HG K++ + + Y +N T IDYDQ Sbjct: 8 DPEVFDAVVKEYERQFYNLEMIASENFTSLAVMEATGSVLTNKYAEGLPGKRYYGGCEYVDVVENLAIERAKKLFGAE----HANVQPHSGSQANMAVYFAVLNPGDTIMGMDLAHGGHLTHG-----AKVNFSGKLYNVIHYGVNPETELIDYDQ 154
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_DESPS (Serine hydroxymethyltransferase OS=Desulfotalea psychrophila GN=glyA PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 5.392e-34 Identity = 76/160 (47.50%), Postives = 100/160 (62.50%), Query Frame = 1 Query: 217 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 696 L+ DPEI +I+ E+ RQ + LI SEN+ S +V++A GS++TNKYSEGYPG RYY G + ID ES+ RA F + VNVQ SGSP+N VY A LKP D I+ + LPHGGHL+HG K+S +F + Y LNE G +DY++ Sbjct: 13 LQQQDPEIFSLIQQEEVRQHNKIRLIASENYVSSAVLEATGSILTNKYSEGYPGKRYYEGQQLIDQIESIAIDRAKAVFGAE----HVNVQPYSGSPANMAVYLAFLKPGDTILGMALPHGGHLTHG-----SKVSISGKYFNAVSYALNEE-GILDYEE 162 The following BLAST results are available for this feature:
BLAST of FC868797 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868797 ID=FC868797; Name=FC868797; organism=Citrus clementina; type=EST; length=697bpback to top |