FC868799

Overview
NameFC868799
Unique NameFC868799
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length717
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868799 vs. ExPASy Swiss-Prot
Match: PLDP1_ARATH (Phospholipase D p1 OS=Arabidopsis thaliana GN=PLDP1 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.202e-13
Identity = 60/168 (35.71%), Postives = 86/168 (51.19%), Query Frame = 1
Query:    7 FAVYVIIPMWPE-----GDPKTNTVQEILFWQSQTMQMMYSVVAQEL-REMQVDAHPQDYLSFYCLGKREEAPKDVLANNGDKVSDSQKNQRFMIYVHAKGMIVDDEYVIMGSANINQRSMAGSKDTEIAMGSYQPHHTWARKQKHP--HGQI-YGYRKSLWSEHLGM 483
            F V V+IP+ P       D    +V+ I+ WQ +T+   ++ +   L   + V AH  DY+SFY L    +  +D        V+ SQ      +YVH+K MIVDD   ++GSANIN RS+ GS+D+EI +         +R    P   G+     R SLWSEHLG+
Sbjct:  814 FRVVVVIPLLPGFQGGIDDSGAASVRAIMHWQYRTIYRGHNSILTNLYNTIGVKAH--DYISFYGLRAYGKLSED------GPVATSQ------VYVHSKIMIVDDRAALIGSANINDRSLLGSRDSEIGVLIEDTELVDSRMAGKPWKAGKFSSSLRLSLWSEHLGL 967          
BLAST of FC868799 vs. ExPASy Swiss-Prot
Match: PLDA_DICDI (Phospholipase D A OS=Dictyostelium discoideum GN=pldA PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.202e-13
Identity = 54/169 (31.95%), Postives = 84/169 (49.70%), Query Frame = 1
Query:    1 ERFAVYVIIPMWPEGDPKTNTVQEILFWQSQTMQMMYSVVAQELREMQVDAHPQDYLSFYCLGKREEAPKDVLANNGDKVSDSQKNQRFMIYVHAKGMIVDDEYVIMGSANINQRSMAGSKDTEIAMGSYQPHHTWARKQKHPHGQ-------IYGYRKSLWSEHLGML 486
            E F V+++IP   +G  +   ++ ++ WQ  T+    + + + LR    D    +Y+ F  L  R  A  +     G  V++        IYVH+K MIVDD  +I+GSANIN RS+ G +D+E+A        T   K    +GQ       ++ +R  LW EHLG+L
Sbjct:  630 EVFRVFIVIPCQQDGKVEETQIKGLMHWQYSTIIRGENTIMKLLRRDCPDVDLTEYICFLSL--RTHAFLE-----GTFVTEQ-------IYVHSKLMIVDDRTIIVGSANINDRSLIGERDSELAFIIRDEIDTIQTKM---NGQDYIASRLVFNFRLRLWKEHLGLL 781          
BLAST of FC868799 vs. ExPASy Swiss-Prot
Match: PLDP2_ARATH (Phospholipase D p2 OS=Arabidopsis thaliana GN=PLDP2 PE=2 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 5.488e-13
Identity = 56/167 (33.53%), Postives = 83/167 (49.70%), Query Frame = 1
Query:    7 FAVYVIIPMWPE-----GDPKTNTVQEILFWQSQTMQMMYSVVAQELREMQVDAHPQDYLSFYCLGKREEAPKDVLANNGDKVSDSQKNQRFMIYVHAKGMIVDDEYVIMGSANINQRSMAGSKDTEIAMGSYQPH--HTWARKQKHPHGQI-YGYRKSLWSEHLGM 483
            F V ++IP+ P       D    TV+ ++ WQ +T+    + +   L  + +    QDY+SFY L       +D        ++ SQ      IYVH+K MIVDD   ++GS+NIN RS+ GS+D+EI +         +     K   G+  Y  R SLWSEHLG+
Sbjct:  769 FRVVIVIPLLPGFQGGIDDFGAATVRALMHWQYRTISREGTSILDNLNAL-LGPKTQDYISFYGLRSYGRLFED------GPIATSQ------IYVHSKLMIVDDRIAVIGSSNINDRSLLGSRDSEIGVVIEDKEFVESSMNGMKWMAGKFSYSLRCSLWSEHLGL 922          
BLAST of FC868799 vs. ExPASy Swiss-Prot
Match: PLD_PHYIN (Phospholipase D OS=Phytophthora infestans GN=PLD PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.167e-13
Identity = 59/201 (29.35%), Postives = 95/201 (47.26%), Query Frame = 1
Query:    1 ERFAVYVIIPMWP--EGDPKTN---TVQEILFWQSQTMQMMYSVVAQELREMQVDAHPQDYLSFYCLGKREEAPKDVLANNGDKVSDSQKNQRFMIYVHAKGMIVDDEYVIMGSANINQRSMAGSKDTEIAMGSYQPHHTWARKQKHPHGQ---IYGYRKSLWSEHLGMLDN--CFEEPESLDCIRKVNQIAGENWGRFTA 573
            E+F VYV++P+ P  EG+ +++    +  ++ WQ  T+      + + L+   V  HP++Y++F+ L K    P    A                IY+H+K MI DD   I+GSANIN RSM G +D+EIA+      +      + P+ +       R  L+ EHLG+ D+     +P S    + +   A  N   F A
Sbjct: 1171 EKFRVYVVMPLLPAFEGNIRSHELTNLHAVMHWQFATICRGRYSLFEALKG--VTNHPENYVAFFGLRKYGIMPNGCAATE-------------QIYIHSKLMIADDRCAILGSANINDRSMNGDRDSEIALVIEDMQYEDGVMNEKPYRRGVAASKLRLQLFREHLGLADDDLSVADPTSDHTWQAIKSTASSNTKIFEA 1356          
The following BLAST results are available for this feature:
BLAST of FC868799 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
PLDP1_ARATH4.202e-1335.71Phospholipase D p1 OS=Arabidopsis thaliana GN=PLDP... [more]
PLDA_DICDI4.202e-1331.95Phospholipase D A OS=Dictyostelium discoideum GN=p... [more]
PLDP2_ARATH5.488e-1333.53Phospholipase D p2 OS=Arabidopsis thaliana GN=PLDP... [more]
PLD_PHYIN7.167e-1329.35Phospholipase D OS=Phytophthora infestans GN=PLD P... [more]

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Properties
Property NameValue
Genbank descriptionC31004H09EF AbioticL1 Citrus clementina cDNA clone C31004H09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868799 ID=FC868799; Name=FC868799; organism=Citrus clementina; type=EST; length=717bp
GAGAGATTTGCAGTGTATGTCATCATACCTATGTGGCCTGAGGGTGATCC
CAAAACTAACACCGTCCAAGAAATTCTGTTTTGGCAGAGCCAGACGATGC
AGATGATGTATAGTGTTGTTGCACAGGAACTGAGGGAAATGCAAGTGGAC
GCACATCCTCAAGATTACCTCAGTTTTTATTGTCTCGGAAAACGGGAAGA
AGCTCCTAAGGATGTATTGGCCAATAATGGTGATAAGGTCTCTGATTCAC
AGAAAAATCAGCGCTTCATGATATATGTGCATGCCAAGGGGATGATAGTA
GATGATGAATATGTGATCATGGGATCTGCCAACATTAACCAAAGATCCAT
GGCTGGTTCCAAAGACACTGAGATAGCTATGGGTTCTTATCAGCCGCATC
ACACATGGGCTAGGAAGCAGAAACATCCACATGGTCAGATATATGGGTAT
AGGAAGTCACTTTGGTCAGAGCATCTTGGCATGCTAGATAATTGCTTTGA
GGAACCAGAAAGTTTAGACTGTATAAGGAAGGTAAATCAGATTGCTGGAG
AAAACTGGGGTAGATTCACAGCCACGGAGTTCACACCATTGCAGGGCCAC
CTCCTCAGATATCCTCTGCAAGTAGATGCTGATGGGACAGTGAGCCCCTT
ACCAGGTTATGAGCAATTCCCTGATGCCGGTGGTAAAATCATTGGTGTTC
ATTCCATGAGTCTTCCT
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