FC868805

Overview
NameFC868805
Unique NameFC868805
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length656
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15457 contig Ccv1_Contig15457:708..1363. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC868805 vs. ExPASy Swiss-Prot
Match: SAT_PYRAB (Sulfate adenylyltransferase OS=Pyrococcus abyssi GN=sat PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.156e-11
Identity = 55/167 (32.93%), Postives = 83/167 (49.70%), Query Frame = 2
Query:   23 WLIGGDLEVLEPIKYHDGLDRFRLSPAQLRDEFSKRNADAVFAFQLRNPVHNGHALLMTDTRRRLLEMGYQNPILLLHPLGGYTKADDVPLSWRMKQHEKVLEDGVLDPETTVVSIFPSPMHYAGPTEVQWHAKARINAGANFYIVGRDPAGMGH---PVEKRDLYD 514
            +L+GG++E+L  +   +   ++ L P + R  F ++    V AFQ RN  H GH  +        ++  + NP+L     G Y   D+V +    K +E VL +     +  V++     M YAGP E   HA  R N GA  +IVGRD AG+G+   P E  DL+D
Sbjct:  146 YLVGGEIELLNELP--NPFAKYTLRPIETRVLFKEKGWKTVVAFQTRNVPHLGHEYVQK-AALTFVDGLFINPVLGRKKRGDYK--DEVII----KAYE-VLFEHYYPKDVAVLATVRYEMRYAGPREAIHHAIMRKNFGATHFIVGRDHAGVGNYYGPYEAWDLFD 302          
BLAST of FC868805 vs. ExPASy Swiss-Prot
Match: SAT_STAMF (Sulfate adenylyltransferase OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=sat PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.575e-11
Identity = 58/181 (32.04%), Postives = 83/181 (45.86%), Query Frame = 2
Query:    2 AITYARN-WLIGGDLEVLEPIKYHDGLDRFRLSPAQLRDEFSKRNADAVFAFQLRNPVHNGH------ALLMTDTRRRLLEMGYQNPILLLHPLGGYTKADDVPLSWRMKQHEKVLEDGVLDPETTVVSIFPSPMHYAGPTEVQWHAKARINAGANFYIVGRDPAGMG---HPVEKRDLYD 514
            A TY R   L+GG +++L   + H  L+   L P + R  F ++    + AFQ RN  H GH      AL  TD              L +HPL G+ K  D         +E +++    D    +  +  + M+YAGP E   HA  R N GA  +IVGRD AG+G    P E  +++D
Sbjct:  141 AKTYQRKELLLGGTIDLLN--QPHHPLEHRILWPIETRVLFREKKWRTIVAFQTRNVPHRGHEYVQKAALTFTDG-------------LFIHPLIGWKKPGDYRDEVIFAAYEALIKHYYPDNVVVLAGLMMN-MNYAGPREAVHHAIVRKNFGATHFIVGRDHAGVGDYYKPYEAWEIFD 305          
BLAST of FC868805 vs. ExPASy Swiss-Prot
Match: SAT_THEON (Sulfate adenylyltransferase OS=Thermococcus onnurineus (strain NA1) GN=sat PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 9.785e-11
Identity = 52/167 (31.14%), Postives = 81/167 (48.50%), Query Frame = 2
Query:   23 WLIGGDLEVLEPIKYHDGLDRFRLSPAQLRDEFSKRNADAVFAFQLRNPVHNGHALLMTDTRRRLLEMGYQNPILLLHPLGGYTKADDVPLSWRMKQHEKVLEDGVLDPETTVVSIFPSPMHYAGPTEVQWHAKARINAGANFYIVGRDPAGMGH---PVEKRDLYD 514
            +L+GG++E+L  +   +   ++ L P + R  F +R    + AFQ RN  H GH  +        ++  + NP+L     G Y   D+V +    K +E + E        T+ ++    M YAGP E   HA  R N GA  +IVGRD AG+G    P E  D+++
Sbjct:  146 YLVGGEIELLNEVP--NPFAKYTLRPVETRVLFKERGWRTIVAFQTRNAPHVGHEYVQK-AALTFVDGLFINPVLGKKKKGDYK--DEVII----KAYETLFEHYYPKNAATLATV-RYEMRYAGPREAIHHAIMRKNFGATHFIVGRDHAGVGDYYGPYEAWDMFE 302          
The following BLAST results are available for this feature:
BLAST of FC868805 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 113
Match NameE-valueIdentityDescription
SAT_PYRAB1.156e-1132.93Sulfate adenylyltransferase OS=Pyrococcus abyssi G... [more]
SAT_STAMF2.575e-1132.04Sulfate adenylyltransferase OS=Staphylothermus mar... [more]
SAT_THEON9.785e-1131.14Sulfate adenylyltransferase OS=Thermococcus onnuri... [more]

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Properties
Property NameValue
Genbank descriptionC31005A04EF AbioticL1 Citrus clementina cDNA clone C31005A04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868805 ID=FC868805; Name=FC868805; organism=Citrus clementina; type=EST; length=656bp
GGCCATAACTTATGCCCGAAATTGGCTGATTGGAGGTGACTTGGAGGTGC
TAGAACCAATCAAGTACCACGATGGTCTTGATCGTTTCCGATTGTCACCT
GCTCAACTTCGTGATGAATTCAGCAAGCGCAATGCCGATGCTGTGTTTGC
TTTCCAGCTTAGGAATCCTGTGCACAATGGTCATGCTCTATTGATGACTG
ATACCCGTCGTAGGCTTCTTGAGATGGGTTACCAGAATCCTATCCTCTTG
CTACACCCATTAGGAGGCTATACAAAGGCAGATGATGTTCCCCTTAGTTG
GCGAATGAAGCAACATGAAAAGGTGCTTGAGGATGGTGTTCTTGATCCAG
AGACCACTGTGGTTTCTATATTTCCCTCTCCCATGCACTACGCAGGCCCA
ACTGAGGTGCAATGGCATGCAAAAGCTAGGATTAATGCTGGGGCCAACTT
TTATATTGTTGGTAGGGACCCAGCTGGCATGGGCCACCCAGTTGAGAAGA
GAGATCTCTACGACGCTGACCATGGCAAAAAGGTACTGAGCATGGCTCCT
GGACTAGAGCGGCTAAACATCCTTCCTTTCAAGGTTGCAGCGTATGACAA
GACTCAAGGCAAAATGGCATTCTTTGATCCTTCAGGGCTAAGGACTTCCT
CTTCAT
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