FC868812

Overview
NameFC868812
Unique NameFC868812
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length534
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15504 contig Ccv1_Contig15504:106..639. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC868812 vs. ExPASy Swiss-Prot
Match: ACCO1_MALDO (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Malus domestica PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.142e-14
Identity = 49/144 (34.03%), Postives = 79/144 (54.86%), Query Frame = 1
Query:  100 ISQIPVIDMQSLLSKESMDSELAKLDFACKEWGFFQLVNHGMSTAFLEELKKEVEGFFNHSMEEKKKYWQRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVL 531
            ++  PV+D+ SL++ E   + L K++ AC+ WGFF+LVNHGMST  L+ ++K  +  +  +ME++ K       +   G   V SE   LDW   F +  LP         P L    R+T++ +++EL+ LAE L+  + E L
Sbjct:    1 MATFPVVDL-SLVNGEERAATLEKINDACENWGFFELVNHGMSTELLDTVEKMTKDHYKKTMEQRFKEM-----VAAKGLDDVQSEIHDLDWESTFFLRHLP--SSNISEIPDLEEEYRKTMKEFAVELEKLAEKLLDLLCENL 136          
BLAST of FC868812 vs. ExPASy Swiss-Prot
Match: FL3H_PETCR (Flavanone 3-dioxygenase OS=Petroselinum crispum GN=FHT PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 3.654e-14
Identity = 45/164 (27.44%), Postives = 80/164 (48.78%), Query Frame = 1
Query:   49 RYIRPDQDSPLISDDILISQIPVIDMQSLLSKESMDSE---LAKLDFACKEWGFFQLVNHGMSTAFLEELKKEVEGFFNHSMEEKKKYWQRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVL 531
            +++R + + P I+ +    +IPVI +  +   +S+D       K+  AC++WG FQ+V+HG+    + E+ +    FF    EEK ++    G   GF  +  +  E   DW ++ +  + P+  R    +P  P   R   E+YS EL  LA  L+  + E +
Sbjct:   18 KFVRDEDERPKIAYNKFSDEIPVISLAGI-DDDSVDKRSQICRKIVEACEDWGIFQVVDHGIDIDLISEMTRLARQFFALPAEEKLRFDMTGGKKGGFIVSSHLQGEAVQDWREIVTYFSYPIQARDYSRWPDKPEGWRSITEMYSDELMALACKLLEVLSEAM 180          
BLAST of FC868812 vs. ExPASy Swiss-Prot
Match: ACCO2_MALDO (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Malus domestica GN=ACO2 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 6.232e-14
Identity = 48/144 (33.33%), Postives = 78/144 (54.17%), Query Frame = 1
Query:  100 ISQIPVIDMQSLLSKESMDSELAKLDFACKEWGFFQLVNHGMSTAFLEELKKEVEGFFNHSMEEKKKYWQRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVL 531
            ++  PV+DM  L++ E   + L K++ AC+ WGFF+LVNHG+ST  L+ ++K  +  +  +ME++ K       +E      V SE   LDW   F +  LP         P L    R+T++ +++EL+ LAE L+  + E L
Sbjct:    1 MATFPVVDMD-LINGEERAATLEKINDACENWGFFELVNHGISTELLDTVEKMNKDHYKKTMEQRFKEMVAAKGLEA-----VQSEIHYLDWESTFFLRHLP--SSNISEIPDLEEDYRKTMKEFAVELEKLAEKLLDLLCENL 136          
BLAST of FC868812 vs. ExPASy Swiss-Prot
Match: FLS_EUSGR (Flavonol synthase/flavanone 3-hydroxylase OS=Eustoma grandiflorum GN=FLS PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.388e-13
Identity = 49/158 (31.01%), Postives = 76/158 (48.10%), Query Frame = 1
Query:   43 PDRYIRPDQDSPLISD-DILISQIPVIDMQSLLSKESMDSELAKLDFACKEWGFFQLVNHGMSTAFLEELKKEVEGFFNHSMEEKKKYWQRPG--DMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENL 507
            P  YIR + + P+IS    ++ ++PVID    LS       +  +  A KEWG FQ+VNHG+    + +L++  + FF    EEK+   +  G   +EG+G       + K  W D       P        +PK PP+ RE  E Y+  L+ + +NL
Sbjct:   20 PAEYIRSENEQPVISTVHGVVLEVPVID----LSDSDEKKIVGLVSEASKEWGIFQVVNHGIPNEVIRKLQEVGKHFFELPQEEKELIAKPEGSQSIEGYGTRLQKEVDGKKGWVDHLFHKIWPPSAINYQFWPKNPPAYREANEEYAKRLQLVVDNL 173          
BLAST of FC868812 vs. ExPASy Swiss-Prot
Match: LDOX_MALDO (Leucoanthocyanidin dioxygenase OS=Malus domestica GN=ANS PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 1.813e-13
Identity = 48/166 (28.92%), Postives = 82/166 (49.40%), Query Frame = 1
Query:   43 PDRYIRPDQDSPLISDDILIS------QIPVIDMQSLLS-KESMDSELA-KLDFACKEWGFFQLVNHGMSTAFLEELKKEVEGFFNHSMEEKKKYW--QRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLI 510
            P  YIRP  +   I D           Q+P ID++ + S  E + ++   KL  A  +WG   LVNHG+S   +++++K  + FF+  +E+K+KY   Q  G ++G+G     +   +L+W D F     P   R   ++P+ P    E    Y+ +L+ LA  ++
Sbjct:   23 PKEYIRPKDELVNIGDIFEQEKNNEGPQVPTIDLKEIESDNEKVRAKCREKLKKAAVDWGVMHLVNHGISDELMDKVRKAGKAFFDLPIEQKEKYANDQASGKIQGYGSKLANNASGQLEWEDYFFHCVYPEDKRDLSIWPQTPADYIEATAEYAKQLRELATKVL 188          
BLAST of FC868812 vs. ExPASy Swiss-Prot
Match: FLS_MATIN (Flavonol synthase/flavanone 3-hydroxylase (Fragment) OS=Matthiola incana PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 1.813e-13
Identity = 44/142 (30.99%), Postives = 74/142 (52.11%), Query Frame = 1
Query:  106 QIPVIDMQSLLSKESMDSELAKLDFACKEWGFFQLVNHGMSTAFLEELKKEVEGFFNHSMEEKKKYWQRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVL 531
            Q+PV+D+ S   +E +   + K   A ++WG FQ+VNHG+ T  ++ L+K    FF     EK+   +  G +EG+G+   +  +++    D   + T P        +PK PP  RE  E Y+  +KTL+E ++  + E L
Sbjct:    1 QVPVVDL-SCPDEELVARTVVK---ASEDWGVFQVVNHGIPTELIQRLQKVGREFFELPEAEKRSCAREAGSVEGYGRRIELDIKKRKGIVDQIYLSTWPPSSVNYRYWPKSPPDYREVNEEYARHVKTLSEKIMEWLSEGL 138          
BLAST of FC868812 vs. ExPASy Swiss-Prot
Match: FL3H_VITVI (Naringenin,2-oxoglutarate 3-dioxygenase OS=Vitis vinifera GN=F3H PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 1.813e-13
Identity = 46/167 (27.54%), Postives = 81/167 (48.50%), Query Frame = 1
Query:   52 YIRPDQDSPLISDDILISQIPVIDMQSLLSKESM------DSELAKLDFACKEWGFFQLVNHGMSTAFLEELKKEVEGFFNHSMEEKKKYWQRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLN 534
            ++R + + P ++ +   ++IPVI     L+KESM      D    K+  AC++WG FQ+VNHG+ +  + E+ +    FF    EE  ++    G   GF  +  +  E   DW ++ +  + P+  R    +P  P   R   + YS +L  LA  L+  + E ++
Sbjct:   19 FVRDEDERPKVAYNDFSNEIPVIS----LTKESMKLAAVVDEICRKIVEACEDWGIFQVVNHGVDSNLISEMTRLAREFFALPPEENVRFDMSGGKKGGFIVSSHLQGEAVQDWREIVTYFSYPLRTRDYSRWPDKPEGWRSVTQEYSEKLMGLACKLLEVLSEAMD 181          
BLAST of FC868812 vs. ExPASy Swiss-Prot
Match: GAOX1_ARATH (Gibberellin 20 oxidase 1 OS=Arabidopsis thaliana GN=20ox1 PE=2 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 3.093e-13
Identity = 41/131 (31.30%), Postives = 73/131 (55.73%), Query Frame = 1
Query:   16 LVKNPALF-----APDRYIRPDQDSPLISDDILISQIPVIDMQSLLSKESMDSELAKL-DFACKEWGFFQLVNHGMSTAFLEELKKEVEGFFNHSMEEKKKYWQRPGDMEGFGQAFVVSEEQKLDWADLFS 390
            L+ NP++       P+++I PD + P I+  +L   +P+ID+Q+LLS  S   + ++L   ACK+ GFF +VNHG+S   + +  +    FF+  + EK++  ++ G+  G+  +F      KL W +  S
Sbjct:   27 LIFNPSMLNLQANIPNQFIWPDDEKPSIN--VLELDVPLIDLQNLLSDPSSTLDASRLISEACKKHGFFLVVNHGISEELISDAHEYTSRFFDMPLSEKQRVLRKSGESVGYASSFTGRFSTKLPWKETLS 155          
BLAST of FC868812 vs. ExPASy Swiss-Prot
Match: ACCO1_ORYSJ (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Oryza sativa subsp. japonica GN=ACO1 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 4.040e-13
Identity = 46/143 (32.17%), Postives = 77/143 (53.85%), Query Frame = 1
Query:  103 SQIPVIDMQSLLSKESMDSELAKLDFACKEWGFFQLVNHGMSTAFLEELKKEVEGFFNHSMEEKKKYWQRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVL 531
            S  PVI+M+ LL+ E   + + +LD AC+ WGFF+++NHG+ST  ++E++K  +  +    E++   +      EG      V++ +KLDW   F +  LP         P L    R  ++ ++ EL+TLAE L+  + E L
Sbjct:    5 STFPVINME-LLAGEERPAAMEQLDDACENWGFFEILNHGISTELMDEVEKMTKDHYKRVREQRFLEFASKTLKEGCDD---VNKAEKLDWESTFFVRHLPESNIAD--IPDLDDDYRRLMKRFAAELETLAERLLDLLCENL 141          
BLAST of FC868812 vs. ExPASy Swiss-Prot
Match: ACCO1_ORYSI (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Oryza sativa subsp. indica GN=ACO1 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 4.040e-13
Identity = 46/143 (32.17%), Postives = 77/143 (53.85%), Query Frame = 1
Query:  103 SQIPVIDMQSLLSKESMDSELAKLDFACKEWGFFQLVNHGMSTAFLEELKKEVEGFFNHSMEEKKKYWQRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVL 531
            S  PVI+M+ LL+ E   + + +LD AC+ WGFF+++NHG+ST  ++E++K  +  +    E++   +      EG      V++ +KLDW   F +  LP         P L    R  ++ ++ EL+TLAE L+  + E L
Sbjct:    5 STFPVINME-LLAGEERPAAMEQLDDACENWGFFEILNHGISTELMDEVEKMTKDHYKRVREQRFLEFASKTLKEGCDD---VNKAEKLDWESTFFVRHLPESNIAD--IPDLDDDYRRLMKRFAAELETLAERLLDLLCENL 141          
The following BLAST results are available for this feature:
BLAST of FC868812 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
ACCO1_MALDO2.142e-1434.031-aminocyclopropane-1-carboxylate oxidase 1 OS=Mal... [more]
FL3H_PETCR3.654e-1427.44Flavanone 3-dioxygenase OS=Petroselinum crispum GN... [more]
ACCO2_MALDO6.232e-1433.331-aminocyclopropane-1-carboxylate oxidase 2 OS=Mal... [more]
FLS_EUSGR1.388e-1331.01Flavonol synthase/flavanone 3-hydroxylase OS=Eusto... [more]
LDOX_MALDO1.813e-1328.92Leucoanthocyanidin dioxygenase OS=Malus domestica ... [more]
FLS_MATIN1.813e-1330.99Flavonol synthase/flavanone 3-hydroxylase (Fragmen... [more]
FL3H_VITVI1.813e-1327.54Naringenin,2-oxoglutarate 3-dioxygenase OS=Vitis v... [more]
GAOX1_ARATH3.093e-1331.30Gibberellin 20 oxidase 1 OS=Arabidopsis thaliana G... [more]
ACCO1_ORYSJ4.040e-1332.171-aminocyclopropane-1-carboxylate oxidase 1 OS=Ory... [more]
ACCO1_ORYSI4.040e-1332.171-aminocyclopropane-1-carboxylate oxidase 1 OS=Ory... [more]

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Properties
Property NameValue
Genbank descriptionC31005A12EF AbioticL1 Citrus clementina cDNA clone C31005A12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868812 ID=FC868812; Name=FC868812; organism=Citrus clementina; type=EST; length=534bp
CCTTGTGTTCAAGAGTTGGTCAAGAATCCGGCGTTATTTGCCCCCGACAG
ATACATACGTCCAGATCAAGATTCACCCCTCATTTCTGATGATATTTTGA
TTTCACAGATACCAGTTATTGACATGCAAAGCTTACTTTCTAAAGAATCA
ATGGACTCTGAGTTAGCCAAGCTCGACTTCGCATGCAAAGAATGGGGTTT
TTTCCAGCTGGTAAATCATGGAATGAGCACAGCATTTCTAGAAGAATTAA
AGAAAGAGGTTGAGGGATTCTTCAATCACAGCATGGAAGAAAAGAAAAAA
TATTGGCAGCGTCCAGGAGATATGGAAGGATTTGGACAAGCCTTTGTTGT
ATCGGAGGAACAAAAGCTTGATTGGGCTGACCTTTTCTCCATGATGACTC
TTCCAGTTCATCTGAGGAAACCACATTTATTTCCTAAGCTCCCTCCTTCC
CTCAGAGAGACCTTGGAAGTTTACTCAATGGAATTAAAAACCCTAGCCGA
GAACCTAATATCGAAAATGGGAGAAGTGTTAAAT
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