FC868812

Overview
NameFC868812
Unique NameFC868812
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length534
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15504 contig Ccv1_Contig15504:106..639. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC868812 vs. ExPASy Swiss-Prot
Match: ACCO_MUSAC (1-aminocyclopropane-1-carboxylate oxidase OS=Musa acuminata GN=MAO1B PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 5.276e-13
Identity = 49/147 (33.33%), Postives = 74/147 (50.34%), Query Frame = 1
Query:  109 IPVIDMQSLLSKESMDSELAKLDFACKEWGFFQLVNHGMSTAFLEELKKEVEGFFNHSMEEKKKYWQRPGDM------EGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVL 531
            IPVID   L  KE  ++ +A++   C+EWGFFQLVNHG+    LE +KK     +   + E++    +P  +      EG GQ         +DW D+F        L+  + +P  PP   ET++ Y  E++ LAE ++  M E L
Sbjct:    3 IPVIDFSKLDGKERAET-MARIANGCEEWGFFQLVNHGIPVELLERVKKVSSECY--KLREERFEGSKPVQLLDTLVKEGDGQRL-----DNVDWEDVFV-------LQDDNEWPSNPPDFEETMKEYREEIRKLAEKMMEVMDENL 134          
BLAST of FC868812 vs. ExPASy Swiss-Prot
Match: FL3H_MATIN (Naringenin,2-oxoglutarate 3-dioxygenase (Fragment) OS=Matthiola incana GN=FHT PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 6.890e-13
Identity = 41/162 (25.31%), Postives = 79/162 (48.77%), Query Frame = 1
Query:   49 RYIRPDQDSPLISDDILISQIPVIDMQSLLSKESMDSELAK-LDFACKEWGFFQLVNHGMSTAFLEELKKEVEGFFNHSMEEKKKYWQRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVL 531
            +++R + + P ++ +    +IPVI +  +   +    E+ + +  AC+ WG FQ+V+HG+ T+ + ++ +    FF    EEK ++    G   GF  +  +  E   DW ++ +  + PV  R    +P  P    +  E YS +L  LA  L+  + E +
Sbjct:   17 KFVRDEDERPKVAYNEFSDEIPVISLAGIDDVDGKRGEICREIVEACENWGIFQVVDHGVDTSLVADMTRLARDFFALPPEEKLRFDMSGGKKGGFIVSSHLQGEAVQDWREIVTYFSYPVRNRDYSRWPDKPQGWAKVTEEYSEKLMGLACKLLEVLSEAM 178          
BLAST of FC868812 vs. ExPASy Swiss-Prot
Match: FL3H_CALCH (Naringenin,2-oxoglutarate 3-dioxygenase OS=Callistephus chinensis GN=FHT PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 6.890e-13
Identity = 42/164 (25.61%), Postives = 79/164 (48.17%), Query Frame = 1
Query:   46 DRYIRPDQDSPLISDDILISQIPVIDMQSL--LSKESMDSELAKLDFACKEWGFFQLVNHGMSTAFLEELKKEVEGFFNHSMEEKKKYWQRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVL 531
            ++++R + + P +  +   ++IPVI +  +    +  +  E+ K   AC++WG FQ+V+HG+ T  L ++      FF+   +EK ++    G   GF  +  +  E   DW ++ +  + P+  R    +P  P   R   E YS  L  LA  L+  + E +
Sbjct:   17 NKFVRDEDERPKVPYNTFSNEIPVISLAGIDGCRRAEICDEIVK---ACEDWGIFQVVDHGVDTKLLSDMTGLARDFFHLPTQEKLRFDMTGGKKGGFIVSSHLQGEAVQDWREIVTYFSYPIKARDYSRWPDKPNEWRAVTEEYSKVLMGLACKLLEVLSEAM 177          
BLAST of FC868812 vs. ExPASy Swiss-Prot
Match: FL3H_ARATH (Naringenin,2-oxoglutarate 3-dioxygenase OS=Arabidopsis thaliana GN=F3H PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 6.890e-13
Identity = 40/162 (24.69%), Postives = 79/162 (48.77%), Query Frame = 1
Query:   49 RYIRPDQDSPLISDDILISQIPVIDMQSLLSKESMDSELAK-LDFACKEWGFFQLVNHGMSTAFLEELKKEVEGFFNHSMEEKKKYWQRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVL 531
            +++R + + P ++ ++   +IPVI +  +   +    E+ + +  AC+ WG FQ+V+HG+ T  + ++ +    FF    E+K ++    G   GF  +  +  E   DW ++ +  + PV  R    +P  P    +  E YS  L +LA  L+  + E +
Sbjct:   18 KFVRDEDERPKVAYNVFSDEIPVISLAGIDDVDGKRGEICRQIVEACENWGIFQVVDHGVDTNLVADMTRLARDFFALPPEDKLRFDMSGGKKGGFIVSSHLQGEAVQDWREIVTYFSYPVRNRDYSRWPDKPEGWVKVTEEYSERLMSLACKLLEVLSEAM 179          
BLAST of FC868812 vs. ExPASy Swiss-Prot
Match: GAO1B_WHEAT (Gibberellin 20 oxidase 1-B OS=Triticum aestivum GN=GA20ox1B PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 5.833e-12
Identity = 50/170 (29.41%), Postives = 85/170 (50.00%), Query Frame = 1
Query:   43 PDRYIRPDQDSPLISDDILISQIPVIDMQSLLSKESM-DSELAKL-DFACKEWGFFQLVNHGMSTAFLEELKKEVEGFFNHSMEEKKKYWQRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVH--LRKPHLFPKLPPSLRETLEVYS---MELKTLAENLISKMGEVL 531
            P ++I P+ +SP   D      +P+ID+  +LS +    +E+ +L   AC+  GFFQ+VNHG+    L +  + V+ FF   + EK++  +RPG+  G+  +F      KL W +  S  + P    L   ++   L    R   EVY+    E+  L+  ++  +GE L
Sbjct:   18 PSQFIWPEGESPT-PDAAEELHVPLIDIGGMLSGDPRATAEVTRLVGEACERHGFFQVVNHGIDAELLADAHRCVDAFFTMPLPEKQRALRRPGESCGYASSFTGRFASKLPWKETLSFRSCPSDPALVVDYIVATLGEDHRRLGEVYARYCSEMSRLSLEIMEVLGESL 186          
BLAST of FC868812 vs. ExPASy Swiss-Prot
Match: FLS_PETCR (Flavonol synthase/flavanone 3-hydroxylase OS=Petroselinum crispum GN=FLS PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 7.618e-12
Identity = 47/162 (29.01%), Postives = 78/162 (48.15%), Query Frame = 1
Query:   43 PDRYIRPDQDSPLISD-DILISQIPVIDMQSLLSKESMDSELAKLDFACKEWGFFQLVNHGMSTAFLEELKKEVEGFFNHSMEEKKKYWQRPG--DMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKM 519
            P  YIR + + P ++    ++ Q+PVID+ S  + E    EL  +  A +EWG FQ+VNHG+    + +L+K  + FF    +EK+   +  G   +EG+G         K  W D    +  P      + +P  PP  RE  E Y++ L+ + + L   +
Sbjct:   20 PSEYIRSESEQPAVTTMQGVVLQVPVIDLGSSNNTEENLVEL--IAEASREWGIFQVVNHGIPDDAIAKLQKVGKEFFELPQQEKEVIAKPEGYQGVEGYGTKLQKELGGKKGWVDHLFHIIWPKSAVNYNFWPNNPPLYREANEEYAVALRGVVDKLFEAL 179          
BLAST of FC868812 vs. ExPASy Swiss-Prot
Match: FLS1_ARATH (Flavonol synthase/flavanone 3-hydroxylase OS=Arabidopsis thaliana GN=FLS1 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 7.618e-12
Identity = 50/166 (30.12%), Postives = 77/166 (46.39%), Query Frame = 1
Query:   43 PDRYIRPDQDSPLISDDI-LISQIPVIDMQSLLSKESMDSELAKLDFACKEWGFFQLVNHGMSTAFLEELKKEVEGFFNHSMEEKKKYWQRPG--DMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVL 531
            P  +IR +++ P I+        IPV+D+     +ES+   + K   A +EWG FQ+VNHG+ T  +  L+     FF     EK+   +     D+EG+G       E K  W D       P        +PK PP  RE  E Y++ +K L+E L+  + + L
Sbjct:   20 PLEFIRSEKEQPAITTFRGPTPAIPVVDLSDP-DEESVRRAVVK---ASEEWGLFQVVNHGIPTELIRRLQDVGRKFFELPSSEKESVAKPEDSKDIEGYGTKLQKDPEGKKAWVDHLFHRIWPPSCVNYRFWPKNPPEYREVNEEYAVHVKKLSETLLGILSDGL 181          
BLAST of FC868812 vs. ExPASy Swiss-Prot
Match: FL3H_DIACA (Naringenin,2-oxoglutarate 3-dioxygenase OS=Dianthus caryophyllus GN=FHT PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 7.618e-12
Identity = 41/160 (25.62%), Postives = 76/160 (47.50%), Query Frame = 1
Query:   52 YIRPDQDSPLISDDILISQIPVIDMQSLLSKESMDSELAKLDFACKEWGFFQLVNHGMSTAFLEELKKEVEGFFNHSMEEKKKYWQRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVL 531
            ++R + + P ++ +   + IPVI +  +   E       K+  AC++WG FQ+V+HG+    + ++ +    FF    EEK ++    G   GF  +  +  E   DW ++ +  + P + R    +P  P    +  E YS +L TLA  L+  + E +
Sbjct:   22 FVRDEDERPKVAYNEFSNDIPVISLAGI-DGEKRGEICRKIVEACEDWGIFQVVDHGVGDDLIADMTRLAREFFALPAEEKLRFDMSGGKKGGFIVSSHLQGEVVQDWREIVTYFSYPTNSRDYTRWPDKPEGWIKVTEEYSNKLMTLACTLLGVLSEAM 180          
BLAST of FC868812 vs. ExPASy Swiss-Prot
Match: ACCO_ACTDE (1-aminocyclopropane-1-carboxylate oxidase OS=Actinidia deliciosa GN=ACO PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 9.950e-12
Identity = 44/138 (31.88%), Postives = 72/138 (52.17%), Query Frame = 1
Query:  112 PVIDMQSLLSKESMDSELAKLDFACKEWGFFQLVNHGMSTAFLEELKKEVEGFFNHSMEEKKKYWQRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGE 525
            PVIDM+ L  +E   + + K+  AC+ WGFF+LVNHG+S   ++ +++  +  +N  ME++ K       +E      V SE   LDW   F +  LPV        P L    R+ ++ ++ +L+ LAE L+  + E
Sbjct:    5 PVIDMEKLNGEERAPT-MEKIKDACENWGFFELVNHGISHELMDTVERLTKEHYNKCMEQRFKEMVATKGLEA-----VQSEINDLDWESTFFLRHLPV--SNISEIPDLEQDHRKAMKEFAEKLEKLAEQLLDLLCE 134          
BLAST of FC868812 vs. ExPASy Swiss-Prot
Match: FL3H_PETHY (Naringenin,2-oxoglutarate 3-dioxygenase (Fragment) OS=Petunia hybrida GN=AN3 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.299e-11
Identity = 39/161 (24.22%), Postives = 78/161 (48.45%), Query Frame = 1
Query:   52 YIRPDQDSPLISDDILISQIPVIDMQSLLSKESMDSELA-KLDFACKEWGFFQLVNHGMSTAFLEELKKEVEGFFNHSMEEKKKYWQRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVL 531
            +IR + + P ++ +   ++IP+I ++ +  +    +E+  K+  AC++WG FQ+V+HG+    + ++    + FF    EEK ++    G   GF  +  +  E   DW ++ +  + P   R    +P  P       + YS +L  LA  L+  + E +
Sbjct:   22 FIRDEDERPKVAYNQFSNEIPIISLEGIDDETGKRAEICDKIVKACEDWGVFQVVDHGVDAEVISQMTTFAKEFFALPPEEKLRFDMSGGKKGGFIVSSHLQGEVVQDWREIVTYFSYPTRARDYSRWPDKPEGWIAVTQKYSEKLMELACKLLDVLSEAM 182          
The following BLAST results are available for this feature:
BLAST of FC868812 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
ACCO_MUSAC5.276e-1333.331-aminocyclopropane-1-carboxylate oxidase OS=Musa ... [more]
FL3H_MATIN6.890e-1325.31Naringenin,2-oxoglutarate 3-dioxygenase (Fragment)... [more]
FL3H_CALCH6.890e-1325.61Naringenin,2-oxoglutarate 3-dioxygenase OS=Callist... [more]
FL3H_ARATH6.890e-1324.69Naringenin,2-oxoglutarate 3-dioxygenase OS=Arabido... [more]
GAO1B_WHEAT5.833e-1229.41Gibberellin 20 oxidase 1-B OS=Triticum aestivum GN... [more]
FLS_PETCR7.618e-1229.01Flavonol synthase/flavanone 3-hydroxylase OS=Petro... [more]
FLS1_ARATH7.618e-1230.12Flavonol synthase/flavanone 3-hydroxylase OS=Arabi... [more]
FL3H_DIACA7.618e-1225.63Naringenin,2-oxoglutarate 3-dioxygenase OS=Dianthu... [more]
ACCO_ACTDE9.950e-1231.881-aminocyclopropane-1-carboxylate oxidase OS=Actin... [more]
FL3H_PETHY1.299e-1124.22Naringenin,2-oxoglutarate 3-dioxygenase (Fragment)... [more]

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Properties
Property NameValue
Genbank descriptionC31005A12EF AbioticL1 Citrus clementina cDNA clone C31005A12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868812 ID=FC868812; Name=FC868812; organism=Citrus clementina; type=EST; length=534bp
CCTTGTGTTCAAGAGTTGGTCAAGAATCCGGCGTTATTTGCCCCCGACAG
ATACATACGTCCAGATCAAGATTCACCCCTCATTTCTGATGATATTTTGA
TTTCACAGATACCAGTTATTGACATGCAAAGCTTACTTTCTAAAGAATCA
ATGGACTCTGAGTTAGCCAAGCTCGACTTCGCATGCAAAGAATGGGGTTT
TTTCCAGCTGGTAAATCATGGAATGAGCACAGCATTTCTAGAAGAATTAA
AGAAAGAGGTTGAGGGATTCTTCAATCACAGCATGGAAGAAAAGAAAAAA
TATTGGCAGCGTCCAGGAGATATGGAAGGATTTGGACAAGCCTTTGTTGT
ATCGGAGGAACAAAAGCTTGATTGGGCTGACCTTTTCTCCATGATGACTC
TTCCAGTTCATCTGAGGAAACCACATTTATTTCCTAAGCTCCCTCCTTCC
CTCAGAGAGACCTTGGAAGTTTACTCAATGGAATTAAAAACCCTAGCCGA
GAACCTAATATCGAAAATGGGAGAAGTGTTAAAT
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