FC868812
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC868812 vs. ExPASy Swiss-Prot
Match: GAO1D_WHEAT (Gibberellin 20 oxidase 1-D OS=Triticum aestivum GN=GA20ox1D PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.697e-11 Identity = 49/170 (28.82%), Postives = 85/170 (50.00%), Query Frame = 1 Query: 43 PDRYIRPDQDSPLISDDILISQIPVIDMQSLLSKE-SMDSELAKL-DFACKEWGFFQLVNHGMSTAFLEELKKEVEGFFNHSMEEKKKYWQRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVH--LRKPHLFPKLPPSLRETLEVYS---MELKTLAENLISKMGEVL 531 P ++I P+ +SP D +P+ID+ +LS + + +E+ +L AC+ GFFQ+VNHG+ L + + V+ FF + EK++ + PG+ G+ +F KL W + S + P L ++ L R EVY+ E+ L+ ++ +GE L Sbjct: 18 PSQFIWPEGESPT-PDAAEELHVPLIDIGGMLSGDPAAAAEVTRLVGEACERHGFFQVVNHGIDAELLADAHRCVDNFFTMPLPEKQRALRHPGESCGYASSFTGRFASKLPWKETLSFRSCPSDPALVVDYIVATLGEDHRRLGEVYARYCSEMSRLSLEIMEVLGESL 186
BLAST of FC868812 vs. ExPASy Swiss-Prot
Match: GAO1A_WHEAT (Gibberellin 20 oxidase 1-A OS=Triticum aestivum GN=GA20ox1A PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.697e-11 Identity = 49/170 (28.82%), Postives = 86/170 (50.59%), Query Frame = 1 Query: 43 PDRYIRPDQDSPLISDDILISQIPVIDMQSLLSKESMDS-ELAKL-DFACKEWGFFQLVNHGMSTAFLEELKKEVEGFFNHSMEEKKKYWQRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVH--LRKPHLFPKLPPSLRETLEVYS---MELKTLAENLISKMGEVL 531 P ++I P+ +SP D +P+I++ +LS ++ + E+ +L AC+ GFFQ+VNHG+ L + + V+ FF + EK++ +RPG+ G+ +F KL W + S + P L ++ L R EVY+ E+ L+ ++ +GE L Sbjct: 18 PSQFIWPEGESPT-PDAAEELHVPLINIGGMLSGDAAAAAEVTRLVGEACERHGFFQVVNHGIDAELLADAHRCVDNFFTMPLPEKQRALRRPGESCGYASSFTGRFASKLPWKETLSFRSCPSDPALVVDYIVATLGEDHRRLGEVYARYCSEMSRLSLEIMEVLGESL 186
BLAST of FC868812 vs. ExPASy Swiss-Prot
Match: GAOX2_ARATH (Gibberellin 20 oxidase 2 OS=Arabidopsis thaliana GN=20ox2 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 4.938e-11 Identity = 41/130 (31.54%), Postives = 69/130 (53.08%), Query Frame = 1 Query: 16 LVKNPALF-----APDRYIRPDQDSPLISDDILISQIPVIDMQSLLSKESMDSELAKLDFACKEWGFFQLVNHGMSTAFLEELKKEVEGFFNHSMEEKKKYWQRPGDMEGFGQAFVVSEEQKLDWADLFS 390 L+ NP+L P+++I PD++ P I DI +P ID+ S S +A+ AC + GFF +VNHG+S + + + + +E FF+ + K+K ++PG+ G+ +F KL W + S Sbjct: 29 LIFNPSLLNLQSQIPNQFIWPDEEKPSI--DIPELNVPFIDLSSQDSTLEAPRVIAE---ACTKHGFFLVVNHGVSESLIADAHRLMESFFDMPLAGKQKAQRKPGESCGYASSFTGRFSTKLPWKETLS 153
BLAST of FC868812 vs. ExPASy Swiss-Prot
Match: FL3H_HORVU (Naringenin,2-oxoglutarate 3-dioxygenase OS=Hordeum vulgare PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 4.938e-11 Identity = 37/160 (23.12%), Postives = 74/160 (46.25%), Query Frame = 1 Query: 52 YIRPDQDSPLISDDILISQIPVIDMQSLLSKESMDSELAKLDFACKEWGFFQLVNHGMSTAFLEELKKEVEGFFNHSMEEKKKYWQRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVL 531 ++R + + P ++ D +P+I + + ++ AC++WG FQ+++HG+ + ++ + FF E+K +Y G GF + + E DW ++ + + PV R +P+ P +E YS L L+ NL+ + E + Sbjct: 24 FVRDEDERPKVAHDRFSDAVPLISLHGIDGARRAQIR-DRVAAACEDWGIFQVIDHGVDADLIADMTRLAREFFALPAEDKLRYDMSGGKKGGFIVSSHLQGEAVQDWREIVTYFSYPVKARDYGRWPEKPAGWCAVVERYSERLMGLSCNLMGVLSEAM 182
BLAST of FC868812 vs. ExPASy Swiss-Prot
Match: ACCO4_PETHY (1-aminocyclopropane-1-carboxylate oxidase 4 OS=Petunia hybrida GN=ACO4 PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 6.449e-11 Identity = 42/144 (29.17%), Postives = 71/144 (49.31%), Query Frame = 1 Query: 100 ISQIPVIDMQSLLSKESMDSELAKLDFACKEWGFFQLVNHGMSTAFLEELKKEVEGFFNHSMEEKKKYWQRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVL 531 + P+I++++L E D+ + + AC+ WGFF+LVNHG+ ++ ++K +G + ME++ K +E V +E LDW F + LPV P L RE + ++ L+ LAE L+ + E L Sbjct: 1 MENFPIINLENLCGAER-DATMEMIKDACENWGFFELVNHGIPHEVMDTVEKFTKGHYKKCMEQRFKELVASKGLEA-----VQAEVTDLDWESTFFLRHLPV--SNISEVPDLDDEYREVMRDFAKRLEKLAEELLDLLCENL 136
BLAST of FC868812 vs. ExPASy Swiss-Prot
Match: ACCH3_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 4 OS=Arabidopsis thaliana GN=At1g06650 PE=2 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 6.449e-11 Identity = 45/155 (29.03%), Postives = 77/155 (49.68%), Query Frame = 1 Query: 76 PLISDDILISQIPVIDMQSLLSKESM--DSELAKLDFACKEWGFFQLVNHGMSTAFLEELKKEVEGFFNHSMEEKKKYWQRPGDMEG-FGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVL 531 PL SD + + IP ID+ ++++ ++ + ++ A +WGFFQ++NHG+S LE++KK V F S E +K+++ R + F + +W D FS T+ KP LP R+ + YS ++ L + L + E L Sbjct: 53 PLPSDLLHLKTIPTIDLGGRDFQDAIKRNNAIEEIKEAAAKWGFFQVINHGVSLELLEKMKKGVRDFHEQSQEVRKEFYSRDFSRRFLYLSNFDLFSSPAANWRDTFS-CTMAPDTPKPQ---DLPEICRDIMMEYSKQVMNLGKFLFELLSEAL 203
BLAST of FC868812 vs. ExPASy Swiss-Prot
Match: ACCO_PEA (1-aminocyclopropane-1-carboxylate oxidase OS=Pisum sativum GN=ACO PE=2 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 8.423e-11 Identity = 42/144 (29.17%), Postives = 71/144 (49.31%), Query Frame = 1 Query: 100 ISQIPVIDMQSLLSKESMDSELAKLDFACKEWGFFQLVNHGMSTAFLEELKKEVEGFFNHSMEEKKKYWQRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVL 531 + P++DM L + E S + + AC+ WGFF+ VNHG+S ++ ++K + + ME++ K +E V SE LDW F + LPV P L R+ ++ ++++L+ LAE L+ + E L Sbjct: 1 MENFPIVDMGKL-NTEDRKSTMELIKDACENWGFFECVNHGISIEMMDTVEKLTKEHYKKCMEQRFKEMVATKGLE-----CVQSEIDDLDWESTFFLRHLPVSSISE--IPDLDDDYRKVMKEFALKLEELAEELLDLLCENL 136 The following BLAST results are available for this feature:
BLAST of FC868812 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 37
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC868812 ID=FC868812; Name=FC868812; organism=Citrus clementina; type=EST; length=534bpback to top |