FC868814

Overview
NameFC868814
Unique NameFC868814
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length687
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig7605 contig Ccv1_Contig7605:12..700. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC868814 vs. ExPASy Swiss-Prot
Match: Y2036_STAES (Uncharacterized oxidoreductase SE_2036 OS=Staphylococcus epidermidis (strain ATCC 12228) GN=SE_2036 PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 5.593e-20
Identity = 51/173 (29.48%), Postives = 106/173 (61.27%), Query Frame = 3
Query:   60 IGKSVSRTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV 578
            + K   +  ++TG S G+G A+A++L+++G +++   R + +L  +  +L  P   +  +V ++SN  ++++ + V++  G  DI+VN+AG  + ++KI D + E++DT+ID N+KG  ++L+  +P ++    G I+N++S  G       A Y A+K A+  +++S+ KE+
Sbjct:    1 MAKVKEKVAVVTGASSGIGEAIAKKLSQQGASIVLVGRNEQRLNEIAQQLNTPAKVVSADVTVKSN--IDDMLKAVIDHFGHIDIVVNSAGQ-SLSSKITDYNVEQWDTMIDVNIKGTLHVLQATLPYLLKQSSGHIINLASVSGFEPTKTNAVYGATKAAIHAITQSLEKEL 170          
BLAST of FC868814 vs. ExPASy Swiss-Prot
Match: FABG_VIBCH (3-oxoacyl-[acyl-carrier-protein] reductase OS=Vibrio cholerae GN=fabG PE=3 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 8.076e-19
Identity = 56/167 (33.53%), Postives = 99/167 (59.28%), Query Frame = 3
Query:   78 RTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV 578
            +  L+TG SRG+G+A+A+ LA+RG  VIG + ++    ++   L +    + LNV   +  S+E + + + ++ G  DI+VNNAG I ++N +  +  EE+  +++TN+  I  + +  +  M+  +QG I+N+ S  G  G A  A Y A+K  V G ++S+A+EV
Sbjct:    6 KVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVT--NPESIEAVLKAITDEFGGVDILVNNAG-ITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREV 169          
BLAST of FC868814 vs. ExPASy Swiss-Prot
Match: FABG_HAEIN (3-oxoacyl-[acyl-carrier-protein] reductase OS=Haemophilus influenzae GN=fabG PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.008e-18
Identity = 56/167 (33.53%), Postives = 95/167 (56.89%), Query Frame = 3
Query:   78 RTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV 578
            +  L+TG +RG+GRA+A+EL+ +G  VIG + ++    ++ + L +    L LNV      S+E L   +    G  DI+VNNAG I ++N +  +  EE+  ++ TN+  + ++ +  +  M+  + G I+N+ S  G +G      YCA+K  V G S+S+AKEV
Sbjct:    4 KIALVTGSTRGIGRAIAEELSSKGAFVIGTATSEKGAEAISAYLGDKGKGLVLNVT--DKESIETLLEQIKNDFGDIDILVNNAG-ITRDNLLMRMKDEEWFDIMQTNLTSVYHLSKAMLRSMMKKRFGRIINIGSVVGSTGNPGQTNYCAAKAGVVGFSKSLAKEV 167          
BLAST of FC868814 vs. ExPASy Swiss-Prot
Match: FABG_THEMA (3-oxoacyl-[acyl-carrier-protein] reductase OS=Thermotoga maritima GN=fabG PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.235e-18
Identity = 62/170 (36.47%), Postives = 95/170 (55.88%), Query Frame = 3
Query:   78 RTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSE---LPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV 578
            +  LITG + G+G+A     A+ G TVI    +++ L SL  E   LP       LNV  R    ++E+   VV+K G  D++VNNAG I ++  +  +  E++D VI+ N+KG+ N+ +  +P MI  + G IVN+SS  G  G      Y ASK  V G++++ AKE+
Sbjct:    6 KVCLITGAASGIGKATTLLFAQEGATVIAGDISKENLDSLVKEAEGLPGKVDPYVLNVTDRDQ--IKEVVEKVVQKYGRIDVLVNNAG-ITRDALLVRMKEEDWDAVINVNLKGVFNVTQMVVPYMIKQRNGSIVNVSSVVGIYGNPGQTNYAASKAGVIGMTKTWAKEL 172          
BLAST of FC868814 vs. ExPASy Swiss-Prot
Match: FABG_VIBHA (3-oxoacyl-[acyl-carrier-protein] reductase OS=Vibrio harveyi GN=fabG PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 8.929e-18
Identity = 57/167 (34.13%), Postives = 95/167 (56.89%), Query Frame = 3
Query:   78 RTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV 578
            +  L+TG SRG+GRA+A+ L +RG TVIG + ++    ++   L      L LNV      S+E   + + ++ G  DI+VNNAG I ++N +  +  +E++ +I+TN+  I  M +  +  M+  + G I+N+ S  G  G A    Y A+K  V G ++S+A+EV
Sbjct:    6 KIALVTGASRGIGRAIAELLVERGATVIGTATSEGGAAAISEYLGENGKGLALNVT--DVESIEATLKTINDECGAIDILVNNAG-ITRDNLLMRMKDDEWNDIINTNLTPIYRMSKAVLRGMMKKRAGRIINVGSVVGTMGNAGQTNYAAAKAGVIGFTKSMAREV 169          
BLAST of FC868814 vs. ExPASy Swiss-Prot
Match: UCPA_SALTY (Oxidoreductase ucpA OS=Salmonella typhimurium GN=ucpA PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.166e-17
Identity = 64/174 (36.78%), Postives = 92/174 (52.87%), Query Frame = 3
Query:   60 IGKSVSRTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLF-LNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGA-ALVAPYCASKWAVEGLSRSVAKE 575
            +GK   +T LITG S+G+G  +A+  A+ G  +I      D++  L  EL    H    +  D+R  +SV+       E +G  DI+VNNAG     N + D+S E+ D  ID N+KG+ N+ +  +P MI  K G IV MSS  G   A      Y  SK A+ GL++S+A E
Sbjct:    1 MGKLTGKTALITGASQGIGEGIARVFARHGANLILLD-ISDEIEKLADELGGRGHRCTAVKADVRDFASVQAAVARAKETEGRIDILVNNAGVCRLGNFL-DMSEEDRDFHIDINIKGVWNVTKAVLPEMIKRKDGRIVMMSSVTGDMVADPGETAYALSKAAIVGLTKSLAVE 172          
BLAST of FC868814 vs. ExPASy Swiss-Prot
Match: UCPA_SALTI (Oxidoreductase ucpA OS=Salmonella typhi GN=ucpA PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.166e-17
Identity = 64/174 (36.78%), Postives = 92/174 (52.87%), Query Frame = 3
Query:   60 IGKSVSRTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLF-LNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGA-ALVAPYCASKWAVEGLSRSVAKE 575
            +GK   +T LITG S+G+G  +A+  A+ G  +I      D++  L  EL    H    +  D+R  +SV+       E +G  DI+VNNAG     N + D+S E+ D  ID N+KG+ N+ +  +P MI  K G IV MSS  G   A      Y  SK A+ GL++S+A E
Sbjct:    1 MGKLTGKTALITGASQGIGEGIARVFARHGANLILLD-ISDEIEKLADELGGRGHRCTAVKADVRDFASVQAAVARAKETEGRIDILVNNAGVCRLGNFL-DMSEEDRDFHIDINIKGVWNVTKAVLPEMIKRKDGRIVMMSSVTGDMVADPGETAYALSKAAIVGLTKSLAVE 172          
BLAST of FC868814 vs. ExPASy Swiss-Prot
Match: DHKR_STRCM (Monensin polyketide synthase putative ketoacyl reductase OS=Streptomyces cinnamonensis PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.166e-17
Identity = 61/179 (34.08%), Postives = 97/179 (54.19%), Query Frame = 3
Query:   66 KSVSRTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNV-DIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPL--MIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV-PDGM 590
            +S SR  L+TG + G+G A A+ LA +GH V   +RT+  + +    L N        V D+R  +SV    +  V++ G  D++VNNAG  +      D++ E +D VIDTN+  +  M R  +    M   ++G I+N++S  G+ G  L APY ASK  V G ++++  E+ P G+
Sbjct:    3 QSTSRVALVTGATSGIGLATARLLAAQGHLVFLGARTESDVIATVKALRNDGLEAEGQVLDVRDGASVTAFVQAAVDRYGRIDVLVNNAGR-SGGGVTADLTDELWDDVIDTNLNSVFRMTRAVLTTGGMRTRERGRIINVASTAGKQGVVLGAPYSASKHGVVGFTKALGNELAPTGI 180          
BLAST of FC868814 vs. ExPASy Swiss-Prot
Match: FABG_BACSU (3-oxoacyl-[acyl-carrier-protein] reductase OS=Bacillus subtilis GN=fabG PE=3 SV=3)

HSP 1 Score: 89.7373 bits (221), Expect = 1.523e-17
Identity = 57/169 (33.73%), Postives = 96/169 (56.80%), Query Frame = 3
Query:   78 RTVLITGVSRGLGRALAQELAKRG-HTVIGCSRTQDKLTSLQSELPNPDHH-LFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV 578
            +T ++TG SRG+GR++A +LAK G + V+  S  + K   +  E+ +     + +  D+ +   V+ + +  +      DI+VNNAG I ++N I  +  +E+D VI+ N+KG+ N  +     M+  + G I+N+SS  G SG    A Y A+K  V GL++S AKE+
Sbjct:    5 KTAIVTGASRGIGRSIALDLAKSGANVVVNYSGNEAKANEVVDEIKSMGRKAIAVKADVSNPEDVQNMIKETLSVFSTIDILVNNAG-ITRDNLIMRMKEDEWDDVININLKGVFNCTKAVTRQMMKQRSGRIINVSSIVGVSGNPGQANYVAAKAGVIGLTKSSAKEL 172          
BLAST of FC868814 vs. ExPASy Swiss-Prot
Match: FABG_SHIFL (3-oxoacyl-[acyl-carrier-protein] reductase OS=Shigella flexneri GN=fabG PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.989e-17
Identity = 55/167 (32.93%), Postives = 94/167 (56.29%), Query Frame = 3
Query:   78 RTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV 578
            +  L+TG SRG+GRA+A+ LA RG  VIG + +++   ++   L      L LNV     +S+E +   +  + G  DI+VNNAG I ++N +  +  EE++ +I+TN+  +  + +  +  M+  + G I+ + S  G  G    A Y A+K  + G S+S+A+EV
Sbjct:    6 KIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNV--TDPASIESVLEKIRAEFGEVDILVNNAG-ITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREV 169          
The following BLAST results are available for this feature:
BLAST of FC868814 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141
Match NameE-valueIdentityDescription
Y2036_STAES5.593e-2029.48Uncharacterized oxidoreductase SE_2036 OS=Staphylo... [more]
FABG_VIBCH8.076e-1933.533-oxoacyl-[acyl-carrier-protein] reductase OS=Vibr... [more]
FABG_HAEIN4.008e-1833.533-oxoacyl-[acyl-carrier-protein] reductase OS=Haem... [more]
FABG_THEMA5.235e-1836.473-oxoacyl-[acyl-carrier-protein] reductase OS=Ther... [more]
FABG_VIBHA8.929e-1834.133-oxoacyl-[acyl-carrier-protein] reductase OS=Vibr... [more]
UCPA_SALTY1.166e-1736.78Oxidoreductase ucpA OS=Salmonella typhimurium GN=u... [more]
UCPA_SALTI1.166e-1736.78Oxidoreductase ucpA OS=Salmonella typhi GN=ucpA PE... [more]
DHKR_STRCM1.166e-1734.08Monensin polyketide synthase putative ketoacyl red... [more]
FABG_BACSU1.523e-1733.733-oxoacyl-[acyl-carrier-protein] reductase OS=Baci... [more]
FABG_SHIFL1.989e-1732.933-oxoacyl-[acyl-carrier-protein] reductase OS=Shig... [more]

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Properties
Property NameValue
Genbank descriptionC31005B02EF AbioticL1 Citrus clementina cDNA clone C31005B02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868814 ID=FC868814; Name=FC868814; organism=Citrus clementina; type=EST; length=687bp
GGGGGAGAGGGAGGGAAATAACAATAACAACGATGGCAGCAACGACGCCG
TTTAACGGGATAGGGAAGAGCGTATCGCGAACAGTACTGATAACGGGAGT
GAGCAGAGGATTAGGGCGAGCCCTAGCTCAAGAGTTGGCCAAGCGCGGCC
ACACCGTGATCGGCTGCTCCCGCACTCAGGATAAGCTCACCTCCCTCCAA
TCAGAACTCCCTAATCCCGACCACCACCTCTTCCTCAATGTCGACATCAG
GTCAAATAGCAGTGTTGAAGAACTAGCACGTCTTGTCGTGGAGAAGAAAG
GCGTTCCTGATATTATAGTAAACAATGCAGGTACTATTAATAAAAATAAC
AAGATTTGGGATGTTTCGCCAGAAGAATTCGACACTGTTATTGATACTAA
TGTGAAAGGCATAGCAAATATGTTGCGTCACTTCATTCCTTTGATGATTC
CAATCAAGCAAGGGATTATCGTTAATATGTCTTCTGGTTGGGGAAGATCT
GGTGCTGCCCTGGTAGCACCTTATTGTGCTTCAAAATGGGCAGTTGAAGG
GTTGTCCAGATCAGTGGCAAAGGAGGTGCCTGATGGGATGGCAATTGTTG
CTTTAATCCTGGTGTTATTACACTGACATGCTTACGTCCTGCTTTGGCAC
TTCTGCTGCATCATACCAGCACCTGATGCATGGGCTT
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