FC868814

Overview
NameFC868814
Unique NameFC868814
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length687
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig7605 contig Ccv1_Contig7605:12..700. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC868814 vs. ExPASy Swiss-Prot
Match: YDFG_SHIFL (NADP-dependent L-serine/L-allo-threonine dehydrogenase ydfG OS=Shigella flexneri GN=ydfG PE=3 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 1.862e-15
Identity = 56/166 (33.73%), Postives = 87/166 (52.41%), Query Frame = 3
Query:   84 VLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEE-LARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV 578
            VL+TG + G G  + +   ++GH VI   R Q++L  L  EL   D+     +D+R+ +++EE LA L  E   + DI+VNNAG           S E+++T+IDTN KG+  M R  +P M+    G I+N+ S  G    A    Y A+K  V   S ++  ++
Sbjct:    3 VLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELTDELG--DNLYIAQLDVRNRAAIEEMLASLPAEWSNI-DILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDL 165          
BLAST of FC868814 vs. ExPASy Swiss-Prot
Match: UCPA_ECOLI (Oxidoreductase ucpA OS=Escherichia coli (strain K12) GN=ucpA PE=1 SV=3)

HSP 1 Score: 82.8037 bits (203), Expect = 1.862e-15
Identity = 61/174 (35.06%), Postives = 92/174 (52.87%), Query Frame = 3
Query:   60 IGKSVSRTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNV-DIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGA-ALVAPYCASKWAVEGLSRSVAKE 575
            +GK   +T LITG  +G+G  +A+  A+ G  +I    + + +  L  EL    H     V D+R  +SV    +   EK+G  DI+VNNAG     + + D+S ++ D  ID N+KG+ N+ +  +P MI  K G IV MSS  G   A      Y  +K A+ GL++S+A E
Sbjct:    1 MGKLTGKTALITGALQGIGEGIARTFARHGANLILLDISPE-IEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRIDILVNNAGVCRLGSFL-DMSDDDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALTKAAIVGLTKSLAVE 172          
BLAST of FC868814 vs. ExPASy Swiss-Prot
Match: UCPA_ECO57 (Oxidoreductase ucpA OS=Escherichia coli O157:H7 GN=ucpA PE=3 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 1.862e-15
Identity = 61/174 (35.06%), Postives = 92/174 (52.87%), Query Frame = 3
Query:   60 IGKSVSRTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNV-DIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGA-ALVAPYCASKWAVEGLSRSVAKE 575
            +GK   +T LITG  +G+G  +A+  A+ G  +I    + + +  L  EL    H     V D+R  +SV    +   EK+G  DI+VNNAG     + + D+S ++ D  ID N+KG+ N+ +  +P MI  K G IV MSS  G   A      Y  +K A+ GL++S+A E
Sbjct:    1 MGKLTGKTALITGALQGIGEGIARTFARHGANLILLDISPE-IEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRIDILVNNAGVCRLGSFL-DMSDDDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALTKAAIVGLTKSLAVE 172          
BLAST of FC868814 vs. ExPASy Swiss-Prot
Match: FABG_RICBR (3-oxoacyl-[acyl-carrier-protein] reductase OS=Rickettsia bellii (strain RML369-C) GN=fabG PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.862e-15
Identity = 60/167 (35.93%), Postives = 96/167 (57.49%), Query Frame = 3
Query:   78 RTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV 578
            +T LITG S G+G A+A++L K G  VI     ++KL +L ++L +        + + + ++ EE + LV + + + DI+V NAG I K+     +  E+FD VID N+K    + R  I  M+  + G I+N++S  G SG    A YCASK  + G+++S+A EV
Sbjct:    7 QTALITGASGGIGGAIARQLHKLGSHVIISGSNEEKLKALGNDLKDN-----YTIKVCNLTNTEECSNLVAQIEKL-DILVCNAG-ITKDTLAIRMKNEDFDQVIDINLKANFILNREAIKKMMTNRYGRIINITSIVGVSGNPGQANYCASKAGLIGMTKSLAYEV 166          
BLAST of FC868814 vs. ExPASy Swiss-Prot
Match: YDFG_ECOLI (NADP-dependent L-serine/L-allo-threonine dehydrogenase ydfG OS=Escherichia coli (strain K12) GN=ydfG PE=1 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 2.432e-15
Identity = 56/166 (33.73%), Postives = 88/166 (53.01%), Query Frame = 3
Query:   84 VLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEE-LARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV 578
            VL+TG + G G  + +   ++GH VI   R Q++L  L+ EL   D+     +D+R+ +++EE LA L  E   + DI+VNNAG           S E+++T+IDTN KG+  M R  +P M+    G I+N+ S  G    A    Y A+K  V   S ++  ++
Sbjct:    3 VLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELG--DNLYIAQLDVRNRAAIEEMLASLPAEWCNI-DILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDL 165          
BLAST of FC868814 vs. ExPASy Swiss-Prot
Match: FABG_CHLMU (3-oxoacyl-[acyl-carrier-protein] reductase OS=Chlamydia muridarum GN=fabG PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.432e-15
Identity = 58/177 (32.77%), Postives = 92/177 (51.98%), Query Frame = 3
Query:   72 VSRTVLITGVSRGLGRALAQELAKRGHTV--------IGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV 578
            V++  ++TG SRG+G  +A+  A+ G  V         G S  QD      S++       F  VD+  N  V    +  + + G  D++VNNAG I +++ +  +S EE+ +VIDTN+  I N+    I  MI  + G IVN+SS  G  G+     Y A+K  + G S++++KEV
Sbjct:    6 VNKAAIVTGGSRGIGFGIAKLFAEHGANVQIWGINEEAGKSAAQDLSDKTGSKVS------FALVDVSKNDMVSAQVQKFLAEYGTIDVVVNNAG-ITRDSLLMRMSEEEWSSVIDTNLGSIYNVCSAVIRPMIKARSGAIVNISSIVGLRGSPGQTNYAAAKAGIIGFSKALSKEV 175          
BLAST of FC868814 vs. ExPASy Swiss-Prot
Match: YDFG_ECO57 (NADP-dependent L-serine/L-allo-threonine dehydrogenase ydfG OS=Escherichia coli O157:H7 GN=ydfG PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.176e-15
Identity = 56/166 (33.73%), Postives = 88/166 (53.01%), Query Frame = 3
Query:   84 VLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEE-LARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV 578
            VL+TG + G G  + +   ++GH VI   R Q++L  L+ EL   D+     +D+R+ +++EE LA L  E   + DI+VNNAG           S E+++T+IDTN KG+  M R  +P M+    G I+N+ S  G    A    Y A+K  V   S ++  ++
Sbjct:    3 VLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELG--DNLYIAQLDVRNRAAIEEMLASLPAEWCNI-DILVNNAGLALGMEPAHKASIEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDL 165          
BLAST of FC868814 vs. ExPASy Swiss-Prot
Match: FABG_PSEAE (3-oxoacyl-[acyl-carrier-protein] reductase OS=Pseudomonas aeruginosa GN=fabG PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.176e-15
Identity = 53/168 (31.55%), Postives = 90/168 (53.57%), Query Frame = 3
Query:   78 RTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELP-NPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV 578
            +  L+TG SRG+G+A+A EL + G  VIG + +      +   L  N      L +D+ S+ SV      + +  G P I+VNNAG I ++N +  +  +E+  V++TN+  +  + +  +  M   + G I+N+ S  G  G A    Y A+K  +EG +R++A+EV
Sbjct:    6 KVALVTGASRGIGQAIALELGRLGAVVIGTATSASGAEKIAETLKANGVEGAGLVLDVSSDESVAATLEHIQQHLGQPLIVVNNAG-ITRDNLLVRMKDDEWFDVVNTNLNSLYRLSKAVLRGMTKARWGRIINIGSVVGAMGNAGQTNYAAAKAGLEGFTRALAREV 172          
BLAST of FC868814 vs. ExPASy Swiss-Prot
Match: FABG_CUPLA (3-oxoacyl-[acyl-carrier-protein] reductase, chloroplastic OS=Cuphea lanceolata GN=CLKR27 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.176e-15
Identity = 57/176 (32.39%), Postives = 94/176 (53.41%), Query Frame = 3
Query:   57 GIGKSV-SRTVLITGVSRGLGRALAQELAKRGHTV-IGCSRTQDKLTSLQSELPN-PDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKE 575
            G G+SV S  V++TG SRG+G+A+A  L K G  V +  +R+  +   +  E+       L    D+     VE + +  V+  G  DI+VNNAG I ++  +  +   ++  VID N+ G+    +    +M+  K+G I+N++S  G  G A  A Y A+K  V G +++VA+E
Sbjct:   70 GAGQSVESPVVIVTGASRGIGKAIALSLGKAGCKVLVNYARSSKEAEEVSKEIEAFGGQALTFGGDVSKEEDVEAMIKTAVDAWGTVDILVNNAG-ITRDGLLMRMKKSQWQEVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNAGQANYSAAKAGVIGFTKTVARE 244          
BLAST of FC868814 vs. ExPASy Swiss-Prot
Match: YM71_YEAST (Uncharacterized oxidoreductase YMR226C OS=Saccharomyces cerevisiae GN=YMR226C PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.148e-15
Identity = 55/174 (31.61%), Postives = 90/174 (51.72%), Query Frame = 3
Query:   78 RTVLITGVSRGLGRALAQELAKRGH---TVIGCSRTQDKLTSLQS----ELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV 578
            +TVLITG S G+G+A A E  +  +    +I  +R  +KL  L+     E PN   H+   +DI     ++     + ++    DI+VNNAG    ++++  ++ E+   V DTNV  + N+ +  +P+      G IVN+ S  GR      + YCASK+AV   + S+ KE+
Sbjct:   14 KTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHV-AQLDITQAEKIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAYPTGSIYCASKFAVGAFTDSLRKEL 186          
The following BLAST results are available for this feature:
BLAST of FC868814 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141
Match NameE-valueIdentityDescription
YDFG_SHIFL1.862e-1533.73NADP-dependent L-serine/L-allo-threonine dehydroge... [more]
UCPA_ECOLI1.862e-1535.06Oxidoreductase ucpA OS=Escherichia coli (strain K1... [more]
UCPA_ECO571.862e-1535.06Oxidoreductase ucpA OS=Escherichia coli O157:H7 GN... [more]
FABG_RICBR1.862e-1535.933-oxoacyl-[acyl-carrier-protein] reductase OS=Rick... [more]
YDFG_ECOLI2.432e-1533.73NADP-dependent L-serine/L-allo-threonine dehydroge... [more]
FABG_CHLMU2.432e-1532.773-oxoacyl-[acyl-carrier-protein] reductase OS=Chla... [more]
YDFG_ECO573.176e-1533.73NADP-dependent L-serine/L-allo-threonine dehydroge... [more]
FABG_PSEAE3.176e-1531.553-oxoacyl-[acyl-carrier-protein] reductase OS=Pseu... [more]
FABG_CUPLA3.176e-1532.393-oxoacyl-[acyl-carrier-protein] reductase, chloro... [more]
YM71_YEAST4.148e-1531.61Uncharacterized oxidoreductase YMR226C OS=Saccharo... [more]

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Properties
Property NameValue
Genbank descriptionC31005B02EF AbioticL1 Citrus clementina cDNA clone C31005B02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868814 ID=FC868814; Name=FC868814; organism=Citrus clementina; type=EST; length=687bp
GGGGGAGAGGGAGGGAAATAACAATAACAACGATGGCAGCAACGACGCCG
TTTAACGGGATAGGGAAGAGCGTATCGCGAACAGTACTGATAACGGGAGT
GAGCAGAGGATTAGGGCGAGCCCTAGCTCAAGAGTTGGCCAAGCGCGGCC
ACACCGTGATCGGCTGCTCCCGCACTCAGGATAAGCTCACCTCCCTCCAA
TCAGAACTCCCTAATCCCGACCACCACCTCTTCCTCAATGTCGACATCAG
GTCAAATAGCAGTGTTGAAGAACTAGCACGTCTTGTCGTGGAGAAGAAAG
GCGTTCCTGATATTATAGTAAACAATGCAGGTACTATTAATAAAAATAAC
AAGATTTGGGATGTTTCGCCAGAAGAATTCGACACTGTTATTGATACTAA
TGTGAAAGGCATAGCAAATATGTTGCGTCACTTCATTCCTTTGATGATTC
CAATCAAGCAAGGGATTATCGTTAATATGTCTTCTGGTTGGGGAAGATCT
GGTGCTGCCCTGGTAGCACCTTATTGTGCTTCAAAATGGGCAGTTGAAGG
GTTGTCCAGATCAGTGGCAAAGGAGGTGCCTGATGGGATGGCAATTGTTG
CTTTAATCCTGGTGTTATTACACTGACATGCTTACGTCCTGCTTTGGCAC
TTCTGCTGCATCATACCAGCACCTGATGCATGGGCTT
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