FC868814

Overview
NameFC868814
Unique NameFC868814
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length687
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig7605 contig Ccv1_Contig7605:12..700. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC868814 vs. ExPASy Swiss-Prot
Match: FABG_RICFE (3-oxoacyl-[acyl-carrier-protein] reductase OS=Rickettsia felis GN=fabG PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.586e-14
Identity = 61/167 (36.53%), Postives = 92/167 (55.09%), Query Frame = 3
Query:   78 RTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV 578
            +T LITG S G+G A+A+ L K G  VI     ++KL SL + L +        ++I + ++ EE + L+  K    DI+V NAG I  +     +  E+FD VID N+K    + R  I  M+  + G I+N+SS  G SG    A YCASK  + G+++S++ EV
Sbjct:    7 KTSLITGASGGIGGAIARLLHKLGSHVIISGSNEEKLKSLGNVLKDN-----YTIEICNLANKEECSNLI-SKAPKLDILVCNAG-ITSDTLAIRMKDEDFDKVIDINLKANFILNREAIKKMMQNRYGRIINISSIVGISGNPGQANYCASKAGLIGMTKSLSYEV 166          
BLAST of FC868814 vs. ExPASy Swiss-Prot
Match: FABG_RICCN (3-oxoacyl-[acyl-carrier-protein] reductase OS=Rickettsia conorii GN=fabG PE=3 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 5.989e-14
Identity = 62/168 (36.90%), Postives = 89/168 (52.98%), Query Frame = 3
Query:   78 RTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIR-SNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV 578
            +T LITG S G+G A+A+ L K G  VI     ++KL SL   + +       N  I   N + +E  R ++ K    DI+V NAG I  +     +  E+FD VID N+K    + R  I  MI  + G I+N+SS  G SG    A YCASK  + G+++S++ EV
Sbjct:    7 KTSLITGASGGIGGAIARLLHKLGSHVIISGSNEEKLQSLGKVVKD-------NYTIEVCNLADKEECRNLISKASKLDILVCNAG-ITSDTLAIRMKDEDFDKVIDINLKANFILNREAIKKMIQNRYGRIINISSIVGISGNPGQANYCASKAGLIGMTKSLSYEV 166          
BLAST of FC868814 vs. ExPASy Swiss-Prot
Match: BDHA_RHIME (D-beta-hydroxybutyrate dehydrogenase OS=Rhizobium meliloti GN=bdhA PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 5.989e-14
Identity = 52/174 (29.89%), Postives = 94/174 (54.02%), Query Frame = 3
Query:   72 VSRTVLITGVSRGLGRALAQELAKRG-HTVIGCSRTQDKLTSLQSELPNPDHHLFLN--VDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEVPD 584
            +++T +ITG + G+G A+A+ LAK G + V+      D++ ++  E+        L+   D+   S + ++  +V ++ G  DI+VNNAG +    KI D   E++D +I  N+    + +R  IP M     G I+N++S  G   +   + Y A+K  + GL+++VA EV +
Sbjct:    1 MTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADRFGGADILVNNAG-VQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVASPFKSAYVAAKHGIMGLTKTVALEVAE 173          
BLAST of FC868814 vs. ExPASy Swiss-Prot
Match: FABG_CHLTR (3-oxoacyl-[acyl-carrier-protein] reductase OS=Chlamydia trachomatis GN=fabG PE=1 SV=3)

HSP 1 Score: 77.0258 bits (188), Expect = 1.022e-13
Identity = 56/176 (31.82%), Postives = 92/176 (52.27%), Query Frame = 3
Query:   63 GKSVSRTVLITGVSRGLGRALAQELAKRGHTV----IGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV 578
            G  V++T ++TG SRG+G ++A+  A++G  V    I     Q    +L  +        F  VD+  N  V    +  + +    D+IVNNAG I ++  +  +S EE+ +VI+TN+  I N+    I  MI  + G I+N+SS  G  G+     Y A+K  + G S++++KEV
Sbjct:    3 GLLVNKTAIVTGGSRGIGFSIAKLFAEQGANVQIWGINGEAGQAAAQTLSEQTGRQVS--FALVDVSKNDMVSAQVQNFLAEYNTIDVIVNNAG-ITRDALLMRMSEEEWSSVINTNLGSIYNVCSAVIRPMIKARSGAIINISSIVGLRGSPGQTNYAAAKAGIIGFSKALSKEV 175          
BLAST of FC868814 vs. ExPASy Swiss-Prot
Match: FABG1_SYNY3 (3-oxoacyl-[acyl-carrier-protein] reductase 1 OS=Synechocystis sp. (strain PCC 6803) GN=fabG1 PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.334e-13
Identity = 50/170 (29.41%), Postives = 93/170 (54.71%), Query Frame = 3
Query:   75 SRTVLITGVSRGLGRALAQELAKRG-HTVIGCSRTQDKLTSLQSEL-PNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV 578
            ++  L+TG SRG+G+A A  LA  G   V+  +++     ++ +E+  N    + +  ++ +   V++L +  ++K    D++VNNAG I ++  +  +  E++  VID N+ G+    +    LM+  K G I+N++S  G  G    A Y A+K  V G +++VAKE+
Sbjct:    6 AQVALVTGASRGIGKATALALAATGMKVVVNYAQSSTAADAVVAEIIANGGEAIAVQANVANADEVDQLIKTTLDKFSRIDVLVNNAG-ITRDTLLLRMKLEDWQAVIDLNLTGVFLCTKAVSKLMLKQKSGRIINITSVAGMMGNPGQANYSAAKAGVIGFTKTVAKEL 174          
BLAST of FC868814 vs. ExPASy Swiss-Prot
Match: DR9C7_HUMAN (Short chain dehydrogenase/reductase family 9C member 7 OS=Homo sapiens GN=SDR9C7 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.334e-13
Identity = 55/177 (31.07%), Postives = 89/177 (50.28%), Query Frame = 3
Query:   54 NGIGKSVSRTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDI--IVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV 578
            N +G    + V ITG   G G  LA++L  RG  V+    T++    LQ +         L  D+  + S++  A+ V +K G   +  +VNNAG    +     ++ ++F  VI+ N+ G+  +  H +P M+   +G +VNMSS  GR  A +   YC SK+ VE  S S+ +E+
Sbjct:   18 NLVGNLSEKYVFITGCDSGFGNLLAKQLVDRGMQVLAACFTEEGSQKLQRDTSYRLQTTLL--DVTKSESIKAAAQWVRDKVGEQGLWALVNNAGVGLPSGPNEWLTKDDFVKVINVNLVGLIEVTLHMLP-MVKRARGRVVNMSSSGGRV-AVIGGGYCVSKFGVEAFSDSIRREL 190          
BLAST of FC868814 vs. ExPASy Swiss-Prot
Match: HETN_ANASP (Ketoacyl reductase hetN OS=Anabaena sp. (strain PCC 7120) GN=hetN PE=3 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 1.743e-13
Identity = 51/154 (33.12%), Postives = 81/154 (52.60%), Query Frame = 3
Query:   78 RTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNP-DHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASK 536
            +TVL+TG SRGLG  +A+ LAK   TV+  SR+Q  L    + +       + +  D+R+ S +  L +   +  G  D+++NNAG I  N    + S  E  ++ +TN+     + R  +P M+    G IVN++S  G+ G A  + Y ASK
Sbjct:    7 KTVLLTGASRGLGVYIARALAKEQATVVCVSRSQSGLAQTCNAVKAAGGKAIAIPFDVRNTSQLSALVQQAQDIVGPIDVLINNAG-IEINGTFANYSLAEIQSIFNTNLLAAMELTRLLLPSMMERGSGRIVNIASLAGKKGVAFNSVYSASK 159          
BLAST of FC868814 vs. ExPASy Swiss-Prot
Match: FABG3_BRANA (3-oxoacyl-[acyl-carrier-protein] reductase 3, chloroplastic OS=Brassica napus GN=bkr3 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.743e-13
Identity = 53/191 (27.75%), Postives = 97/191 (50.79%), Query Frame = 3
Query:   21 TITTMAATTPFNGIGKSV----SRTVLITGVSRGLGRALAQELAKRGHTV-IGCSRTQDKLTSLQSELPN-PDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKE 575
            T+    AT      G++V    S  V++TG SRG+G+A+A  L K G  V +  +R+  +   +  ++       +    D+   + VE + +  ++  G  D++VNNAG I ++  +  +   ++D VID N+ G+    +    +M+  ++G I+N++S  G  G    A Y A+K  V G S++ A+E
Sbjct:   50 TVVKAQATAVEQSTGEAVPKVESPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKEAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTIDVVVNNAG-ITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAARE 239          
BLAST of FC868814 vs. ExPASy Swiss-Prot
Match: FABG1_BRANA (3-oxoacyl-[acyl-carrier-protein] reductase 1, chloroplastic OS=Brassica napus GN=gbkr1 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.743e-13
Identity = 53/191 (27.75%), Postives = 97/191 (50.79%), Query Frame = 3
Query:   21 TITTMAATTPFNGIGKSV----SRTVLITGVSRGLGRALAQELAKRGHTV-IGCSRTQDKLTSLQSELPN-PDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKE 575
            T+    AT      G++V    S  V++TG SRG+G+A+A  L K G  V +  +R+  +   +  ++       +    D+   + VE + +  ++  G  D++VNNAG I ++  +  +   ++D VID N+ G+    +    +M+  ++G I+N++S  G  G    A Y A+K  V G S++ A+E
Sbjct:   55 TVVKAQATAVEQSTGEAVPKVESPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKEAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTIDVVVNNAG-ITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAARE 244          
BLAST of FC868814 vs. ExPASy Swiss-Prot
Match: YGCW_ECOLI (Uncharacterized oxidoreductase ygcW OS=Escherichia coli (strain K12) GN=ygcW PE=3 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 2.276e-13
Identity = 50/167 (29.94%), Postives = 83/167 (49.70%), Query Frame = 3
Query:   78 RTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV 578
            +T ++TG + GLG+A A  LAK G  +   S  +D   + +          F+ V I +  + +++     E+ G  DI+VNNAG I K NK+ D    ++D +ID N+     +      +MIP K G I+N+ S +   G      Y A+K A+ G +++   E+
Sbjct:   19 KTAIVTGGNSGLGQAFAMALAKAGANIFIPSFVKDNGETKEMIEKQGVEVDFMQVGITAEGAPQKIIAACCERFGTVDILVNNAG-ICKLNKVLDFGRADWDPMIDVNLTAAFELSYEAAKIMIPQKSGKIINICSLFSYLGGQWSPAYSATKHALAGFTKAYCDEL 184          
The following BLAST results are available for this feature:
BLAST of FC868814 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141
Match NameE-valueIdentityDescription
FABG_RICFE4.586e-1436.533-oxoacyl-[acyl-carrier-protein] reductase OS=Rick... [more]
FABG_RICCN5.989e-1436.903-oxoacyl-[acyl-carrier-protein] reductase OS=Rick... [more]
BDHA_RHIME5.989e-1429.89D-beta-hydroxybutyrate dehydrogenase OS=Rhizobium ... [more]
FABG_CHLTR1.022e-1331.823-oxoacyl-[acyl-carrier-protein] reductase OS=Chla... [more]
FABG1_SYNY31.334e-1329.413-oxoacyl-[acyl-carrier-protein] reductase 1 OS=Sy... [more]
DR9C7_HUMAN1.334e-1331.07Short chain dehydrogenase/reductase family 9C memb... [more]
HETN_ANASP1.743e-1333.12Ketoacyl reductase hetN OS=Anabaena sp. (strain PC... [more]
FABG3_BRANA1.743e-1327.753-oxoacyl-[acyl-carrier-protein] reductase 3, chlo... [more]
FABG1_BRANA1.743e-1327.753-oxoacyl-[acyl-carrier-protein] reductase 1, chlo... [more]
YGCW_ECOLI2.276e-1329.94Uncharacterized oxidoreductase ygcW OS=Escherichia... [more]

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Properties
Property NameValue
Genbank descriptionC31005B02EF AbioticL1 Citrus clementina cDNA clone C31005B02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868814 ID=FC868814; Name=FC868814; organism=Citrus clementina; type=EST; length=687bp
GGGGGAGAGGGAGGGAAATAACAATAACAACGATGGCAGCAACGACGCCG
TTTAACGGGATAGGGAAGAGCGTATCGCGAACAGTACTGATAACGGGAGT
GAGCAGAGGATTAGGGCGAGCCCTAGCTCAAGAGTTGGCCAAGCGCGGCC
ACACCGTGATCGGCTGCTCCCGCACTCAGGATAAGCTCACCTCCCTCCAA
TCAGAACTCCCTAATCCCGACCACCACCTCTTCCTCAATGTCGACATCAG
GTCAAATAGCAGTGTTGAAGAACTAGCACGTCTTGTCGTGGAGAAGAAAG
GCGTTCCTGATATTATAGTAAACAATGCAGGTACTATTAATAAAAATAAC
AAGATTTGGGATGTTTCGCCAGAAGAATTCGACACTGTTATTGATACTAA
TGTGAAAGGCATAGCAAATATGTTGCGTCACTTCATTCCTTTGATGATTC
CAATCAAGCAAGGGATTATCGTTAATATGTCTTCTGGTTGGGGAAGATCT
GGTGCTGCCCTGGTAGCACCTTATTGTGCTTCAAAATGGGCAGTTGAAGG
GTTGTCCAGATCAGTGGCAAAGGAGGTGCCTGATGGGATGGCAATTGTTG
CTTTAATCCTGGTGTTATTACACTGACATGCTTACGTCCTGCTTTGGCAC
TTCTGCTGCATCATACCAGCACCTGATGCATGGGCTT
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